RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 CASP7P55210 303 aa2.77□□□□□ -1.97
HIF1A-212ENST00000557538 ERVK-24P63145 666 aa2.77□□□□□ -1.97
HIF1A-212ENST00000557538 FBXL19Q6PCT2 694 aa2.77□□□□□ -1.97
HIF1A-212ENST00000557538 IGF2-ASQ6U949 168 aa2.77□□□□□ -1.97
HIF1A-212ENST00000557538 VPS37DQ86XT2 251 aa2.77□□□□□ -1.97
HIF1A-212ENST00000557538 JPH1Q9HDC5 661 aaPredicted RBP2.77□□□□□ -1.97
HIF1A-212ENST00000557538 NOP53Q9NZM5 478 aaKnown RBP2.77□□□□□ -1.97
HIF1A-212ENST00000557538 MKL2Q9ULH7 1088 aa2.77□□□□□ -1.97
HIF1A-212ENST00000557538 METTL12A8MUP2 240 aa2.77□□□□□ -1.97
HIF1A-212ENST00000557538 INSM1Q01101 510 aaPredicted RBP2.77□□□□□ -1.97
HIF1A-212ENST00000557538 UVSSAQ2YD98 709 aa2.77□□□□□ -1.97
HIF1A-212ENST00000557538 INTS3Q68E01 1043 aaKnown RBP2.77□□□□□ -1.97
HIF1A-212ENST00000557538 GALNT11Q8NCW6 608 aa2.77□□□□□ -1.97
HIF1A-212ENST00000557538 STK35Q8TDR2 534 aa2.77□□□□□ -1.97
HIF1A-212ENST00000557538 TRIM11Q96F44 468 aa2.77□□□□□ -1.97
HIF1A-212ENST00000557538 MRPL18Q9H0U6 180 aaKnown RBP2.77□□□□□ -1.97
HIF1A-212ENST00000557538 ACBD3Q9H3P7 528 aa2.77□□□□□ -1.97
HIF1A-212ENST00000557538 SH2B1Q9NRF2 756 aaPredicted RBP2.77□□□□□ -1.97
HIF1A-212ENST00000557538 AKAP2Q9Y2D5 859 aa2.77□□□□□ -1.97
HIF1A-212ENST00000557538 ZNF862O60290 1169 aa2.77□□□□□ -1.97
HIF1A-212ENST00000557538 PF4P02776 101 aa2.77□□□□□ -1.97
HIF1A-212ENST00000557538 GIPRP48546 466 aa2.77□□□□□ -1.97
HIF1A-212ENST00000557538 PAK2Q13177 524 aa2.77□□□□□ -1.97
HIF1A-212ENST00000557538 ZC3H12AQ5D1E8 599 aaKnown RBP2.77□□□□□ -1.97
HIF1A-212ENST00000557538 ZC3HAV1Q7Z2W4 902 aaKnown RBP2.77□□□□□ -1.97
HIF1A-212ENST00000557538 SLC51AQ86UW1 340 aa2.77□□□□□ -1.97
HIF1A-212ENST00000557538 MCF2L2Q86YR7 1114 aa2.77□□□□□ -1.97
HIF1A-212ENST00000557538 TRPA1O75762 1119 aa2.76□□□□□ -1.97
HIF1A-212ENST00000557538 CD68P34810 354 aaPredicted RBP2.76□□□□□ -1.97
HIF1A-212ENST00000557538 RAC1P63000 192 aa2.76□□□□□ -1.97
HIF1A-212ENST00000557538 ARID5AQ03989 594 aa2.76□□□□□ -1.97
HIF1A-212ENST00000557538 POU4F3Q15319 338 aa2.76□□□□□ -1.97
HIF1A-212ENST00000557538 ZNF394Q53GI3 561 aa2.76□□□□□ -1.97
HIF1A-212ENST00000557538 ZNRF3Q9ULT6 936 aa2.76□□□□□ -1.97
HIF1A-212ENST00000557538 GBP2P32456 591 aaPredicted RBP2.76□□□□□ -1.97
HIF1A-212ENST00000557538 SERINC3Q13530 473 aa2.76□□□□□ -1.97
HIF1A-212ENST00000557538 LRRFIP1Q32MZ4 808 aaKnown RBP2.76□□□□□ -1.97
HIF1A-212ENST00000557538 TPTE2Q6XPS3 522 aa2.76□□□□□ -1.97
HIF1A-212ENST00000557538 BEND7Q8N7W2 519 aaPredicted RBP2.76□□□□□ -1.97
HIF1A-212ENST00000557538 NACC1Q96RE7 527 aa2.76□□□□□ -1.97
HIF1A-212ENST00000557538 SPON2Q9BUD6 331 aa2.76□□□□□ -1.97
HIF1A-212ENST00000557538 MIR1-1HGQ9H1L0 117 aa2.76□□□□□ -1.97
HIF1A-212ENST00000557538 CCDC86Q9H6F5 360 aaKnown RBP2.76□□□□□ -1.97
HIF1A-212ENST00000557538 CAPN10Q9HC96 672 aa2.76□□□□□ -1.97
HIF1A-212ENST00000557538 HIF3AQ9Y2N7 669 aa2.76□□□□□ -1.97
HIF1A-212ENST00000557538 LOC100289279A0A1B0GTE1 492 aa2.76□□□□□ -1.97
HIF1A-212ENST00000557538 LINC01387J3KSC0 135 aa2.76□□□□□ -1.97
HIF1A-212ENST00000557538 ADAM11O75078 769 aa2.76□□□□□ -1.97
HIF1A-212ENST00000557538 SPATA31C1P0DKV0 1188 aa2.76□□□□□ -1.97
HIF1A-212ENST00000557538 CCNFP41002 786 aa2.76□□□□□ -1.97
HIF1A-212ENST00000557538 ADGRE1Q14246 886 aa2.76□□□□□ -1.97
HIF1A-212ENST00000557538 FOXD4L6Q3SYB3 417 aaPredicted RBP2.76□□□□□ -1.97
HIF1A-212ENST00000557538 FOXD4L3Q6VB84 417 aaPredicted RBP2.76□□□□□ -1.97
HIF1A-212ENST00000557538 KIAA1211Q6ZU35 1233 aa2.76□□□□□ -1.97
HIF1A-212ENST00000557538 ZSCAN1Q8NBB4 408 aa2.76□□□□□ -1.97
HIF1A-212ENST00000557538 ASAP3Q8TDY4 903 aa2.76□□□□□ -1.97
HIF1A-212ENST00000557538 EZH1Q92800 747 aaPredicted RBP2.76□□□□□ -1.97
HIF1A-212ENST00000557538 CRIM1Q9NZV1 1036 aa2.76□□□□□ -1.97
HIF1A-212ENST00000557538 CADPSQ9ULU8 1353 aa2.75□□□□□ -1.97
HIF1A-212ENST00000557538 C9orf172C9J069 976 aa2.75□□□□□ -1.97
HIF1A-212ENST00000557538 CDCP2Q5VXM1 449 aa2.75□□□□□ -1.97
HIF1A-212ENST00000557538 ANKRD34AQ69YU3 496 aa2.75□□□□□ -1.97
HIF1A-212ENST00000557538 NKD1Q969G9 470 aa2.75□□□□□ -1.97
HIF1A-212ENST00000557538 SCARF2Q96GP6 870 aaPredicted RBP2.75□□□□□ -1.97
HIF1A-212ENST00000557538 FAM46AQ96IP4 442 aaKnown RBP2.75□□□□□ -1.97
HIF1A-212ENST00000557538 SSBP4Q9BWG4 385 aaPredicted RBP2.75□□□□□ -1.97
HIF1A-212ENST00000557538 INPP5FQ9Y2H2 1132 aa2.75□□□□□ -1.97
HIF1A-212ENST00000557538 F8W735 103 aaPredicted RBP2.75□□□□□ -1.97
HIF1A-212ENST00000557538 F13A1P00488 732 aa2.75□□□□□ -1.97
HIF1A-212ENST00000557538 ZNF165P49910 485 aa2.75□□□□□ -1.97
HIF1A-212ENST00000557538 KCNMA1Q12791 1236 aa2.75□□□□□ -1.97
HIF1A-212ENST00000557538 C8orf86Q6ZUL3 223 aa2.75□□□□□ -1.97
HIF1A-212ENST00000557538 HIRIP3Q9BW71 556 aaPredicted RBP2.75□□□□□ -1.97
HIF1A-212ENST00000557538 MSRB2Q9Y3D2 182 aa2.75□□□□□ -1.97
HIF1A-212ENST00000557538 TNFRSF10CO14798 259 aa2.74□□□□□ -1.97
HIF1A-212ENST00000557538 FANCGO15287 622 aa2.74□□□□□ -1.97
HIF1A-212ENST00000557538 KLF4O43474 513 aa2.74□□□□□ -1.97
HIF1A-212ENST00000557538 AOC2O75106 756 aa2.74□□□□□ -1.97
HIF1A-212ENST00000557538 NRG1Q02297 640 aaPredicted RBP2.74□□□□□ -1.97
HIF1A-212ENST00000557538 CWF19L2Q2TBE0 894 aaKnown RBP2.74□□□□□ -1.97
HIF1A-212ENST00000557538 TNNI3KQ59H18 835 aa2.74□□□□□ -1.97
HIF1A-212ENST00000557538 C22orf34Q6ZV56 151 aa2.74□□□□□ -1.97
HIF1A-212ENST00000557538 REC114Q7Z4M0 266 aa2.74□□□□□ -1.97
HIF1A-212ENST00000557538 NOP9Q86U38 636 aaKnown RBP2.74□□□□□ -1.97
HIF1A-212ENST00000557538 MRPL41Q8IXM3 137 aaKnown RBP2.74□□□□□ -1.97
HIF1A-212ENST00000557538 KCT2Q8NC54 265 aa2.74□□□□□ -1.97
HIF1A-212ENST00000557538 KLHDC7BQ96G42 594 aa2.74□□□□□ -1.97
HIF1A-212ENST00000557538 SHDQ96IW2 340 aa2.74□□□□□ -1.97
HIF1A-212ENST00000557538 WDR18Q9BV38 432 aa2.74□□□□□ -1.97
HIF1A-212ENST00000557538 STK17AQ9UEE5 414 aa2.74□□□□□ -1.97
HIF1A-212ENST00000557538 GPN3Q9UHW5 284 aaPredicted RBP2.74□□□□□ -1.97
HIF1A-212ENST00000557538 POLR3KQ9Y2Y1 108 aaPredicted RBP2.74□□□□□ -1.97
HIF1A-212ENST00000557538 PCDHB5Q9Y5E4 795 aa2.74□□□□□ -1.97
HIF1A-212ENST00000557538 CTSBP07858 339 aa2.74□□□□□ -1.97
HIF1A-212ENST00000557538 SNAP47Q5SQN1 464 aa2.74□□□□□ -1.97
HIF1A-212ENST00000557538 HGSNATQ68CP4 663 aa2.74□□□□□ -1.97
HIF1A-212ENST00000557538 HDXQ7Z353 690 aa2.74□□□□□ -1.97
HIF1A-212ENST00000557538 DMRTC2Q8IXT2 367 aaPredicted RBP2.74□□□□□ -1.97
HIF1A-212ENST00000557538 DZIP1LQ8IYY4 767 aaKnown RBP2.74□□□□□ -1.97
HIF1A-212ENST00000557538 CORO1BQ9BR76 489 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms