RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 TMOD2Q9NZR1 351 aa19.45■□□□□ 0.7
TUBB3-214ENST00000557490 DBNLQ9UJU6 430 aaKnown RBP19.45■□□□□ 0.7
TUBB3-214ENST00000557490 MCAMP43121 646 aa19.44■□□□□ 0.7
TUBB3-214ENST00000557490 TTLL12Q14166 644 aaPredicted RBP19.44■□□□□ 0.7
TUBB3-214ENST00000557490 APOBEC3HQ6NTF7 200 aaKnown RBP19.44■□□□□ 0.7
TUBB3-214ENST00000557490 ERICH6Q7L0X2 663 aa19.44■□□□□ 0.7
TUBB3-214ENST00000557490 SLF2Q8IX21 1173 aa19.44■□□□□ 0.7
TUBB3-214ENST00000557490 CLASRPQ8N2M8 674 aaKnown RBP19.44■□□□□ 0.7
TUBB3-214ENST00000557490 CCDC102AQ96A19 550 aa19.44■□□□□ 0.7
TUBB3-214ENST00000557490 MYH13Q9UKX3 1938 aa19.44■□□□□ 0.7
TUBB3-214ENST00000557490 TNNI2P48788 182 aa19.43■□□□□ 0.7
TUBB3-214ENST00000557490 RASA3Q14644 834 aa19.43■□□□□ 0.7
TUBB3-214ENST00000557490 DIXDC1Q155Q3 683 aa19.43■□□□□ 0.7
TUBB3-214ENST00000557490 PI16Q6UXB8 463 aa19.43■□□□□ 0.7
TUBB3-214ENST00000557490 ZNF512BQ96KM6 892 aaPredicted RBP19.43■□□□□ 0.7
TUBB3-214ENST00000557490 CRBNQ96SW2 442 aa19.43■□□□□ 0.7
TUBB3-214ENST00000557490 TLR7Q9NYK1 1049 aaKnown RBP19.43■□□□□ 0.7
TUBB3-214ENST00000557490 DAGLAQ9Y4D2 1042 aa19.43■□□□□ 0.7
TUBB3-214ENST00000557490 TCP10L2B9ZVM9 353 aa19.42■□□□□ 0.7
TUBB3-214ENST00000557490 SUPT20HL1Q3ZLR7 823 aa19.42■□□□□ 0.7
TUBB3-214ENST00000557490 SNRKQ9NRH2 765 aa19.42■□□□□ 0.7
TUBB3-214ENST00000557490 IFIT2P09913 472 aaKnown RBP19.41■□□□□ 0.7
TUBB3-214ENST00000557490 FXR1P51114 621 aaKnown RBP eCLIP19.41■□□□□ 0.7
TUBB3-214ENST00000557490 ZNF157P51786 506 aaPredicted RBP19.41■□□□□ 0.7
TUBB3-214ENST00000557490 PKN2Q16513 984 aaKnown RBP19.41■□□□□ 0.7
TUBB3-214ENST00000557490 TBC1D9Q6ZT07 1266 aa19.41■□□□□ 0.7
TUBB3-214ENST00000557490 ARMC9Q7Z3E5 817 aa19.41■□□□□ 0.7
TUBB3-214ENST00000557490 CSRNP1Q96S65 589 aa19.41■□□□□ 0.7
TUBB3-214ENST00000557490 BCL11AQ9H165 835 aa19.41■□□□□ 0.7
TUBB3-214ENST00000557490 RAI14Q9P0K7 980 aa19.41■□□□□ 0.7
TUBB3-214ENST00000557490 GSTO1P78417 241 aa19.4■□□□□ 0.7
TUBB3-214ENST00000557490 FKBP1CQ5VVH2 108 aa19.4■□□□□ 0.7
TUBB3-214ENST00000557490 LRP2BPQ9P2M1 347 aa19.4■□□□□ 0.7
TUBB3-214ENST00000557490 UBE2Q2LH0YL09 131 aa19.39■□□□□ 0.69
TUBB3-214ENST00000557490 SLC10A3P09131 477 aa19.39■□□□□ 0.69
TUBB3-214ENST00000557490 CACNB3P54284 484 aa19.39■□□□□ 0.69
TUBB3-214ENST00000557490 MECOMQ03112 1051 aa19.39■□□□□ 0.69
TUBB3-214ENST00000557490 PRKG1Q13976 671 aa19.39■□□□□ 0.69
TUBB3-214ENST00000557490 MOB2Q70IA6 237 aa19.39■□□□□ 0.69
TUBB3-214ENST00000557490 LRRCC1Q9C099 1032 aa19.39■□□□□ 0.69
TUBB3-214ENST00000557490 USP40Q9NVE5 1235 aa19.39■□□□□ 0.69
TUBB3-214ENST00000557490 PAPPA2Q9BXP8 1791 aa19.39■□□□□ 0.69
TUBB3-214ENST00000557490 GAKO14976 1311 aa19.38■□□□□ 0.69
TUBB3-214ENST00000557490 PPP1R12BO60237 982 aaPredicted RBP19.38■□□□□ 0.69
TUBB3-214ENST00000557490 LDHCP07864 332 aa19.38■□□□□ 0.69
TUBB3-214ENST00000557490 NBPF12Q5TAG4 269 aaPredicted RBP19.38■□□□□ 0.69
TUBB3-214ENST00000557490 ECM29Q5VYK3 1845 aa19.38■□□□□ 0.69
TUBB3-214ENST00000557490 CDC42EP5Q6NZY7 148 aa19.38■□□□□ 0.69
TUBB3-214ENST00000557490 FAM163AQ96GL9 167 aaPredicted RBP19.38■□□□□ 0.69
TUBB3-214ENST00000557490 DCTPP1Q9H773 170 aa19.38■□□□□ 0.69
TUBB3-214ENST00000557490 PCDHB15Q9Y5E8 787 aa19.38■□□□□ 0.69
TUBB3-214ENST00000557490 MROH7-TTC4A0A0A0MT08 1334 aa19.37■□□□□ 0.69
TUBB3-214ENST00000557490 ZAP70P43403 619 aa19.37■□□□□ 0.69
TUBB3-214ENST00000557490 FAM83AQ86UY5 434 aa19.37■□□□□ 0.69
TUBB3-214ENST00000557490 TMEM39BQ9GZU3 492 aa19.37■□□□□ 0.69
TUBB3-214ENST00000557490 ANGEL1Q9UNK9 670 aaKnown RBP19.37■□□□□ 0.69
TUBB3-214ENST00000557490 HTTP42858 3142 aa19.37■□□□□ 0.69
TUBB3-214ENST00000557490 CEP290O15078 2479 aa19.36■□□□□ 0.69
TUBB3-214ENST00000557490 TRIOBPQ9H2D6 2365 aa19.36■□□□□ 0.69
TUBB3-214ENST00000557490 SZT2Q5T011 3432 aa19.36■□□□□ 0.69
TUBB3-214ENST00000557490 CYP2E1P05181 493 aaPredicted RBP19.36■□□□□ 0.69
TUBB3-214ENST00000557490 AAMPQ13685 434 aa19.36■□□□□ 0.69
TUBB3-214ENST00000557490 NSUN4Q96CB9 384 aaKnown RBP19.36■□□□□ 0.69
TUBB3-214ENST00000557490 SUPT16HQ9Y5B9 1047 aaKnown RBP19.36■□□□□ 0.69
TUBB3-214ENST00000557490 CUL9Q8IWT3 2517 aa19.36■□□□□ 0.69
TUBB3-214ENST00000557490 IGSF3O75054 1194 aa19.35■□□□□ 0.69
TUBB3-214ENST00000557490 BTDP43251 543 aa19.35■□□□□ 0.69
TUBB3-214ENST00000557490 IREB2P48200 963 aaKnown RBP19.35■□□□□ 0.69
TUBB3-214ENST00000557490 ZNF296Q8WUU4 475 aaPredicted RBP19.35■□□□□ 0.69
TUBB3-214ENST00000557490 TEPSINQ96N21 525 aa19.35■□□□□ 0.69
TUBB3-214ENST00000557490 GPR75-ASB3A0A0A6YYF3 556 aa19.34■□□□□ 0.69
TUBB3-214ENST00000557490 NAA16Q6N069 864 aaPredicted RBP19.34■□□□□ 0.69
TUBB3-214ENST00000557490 HOOK2Q96ED9 719 aa19.34■□□□□ 0.69
TUBB3-214ENST00000557490 NOL10Q9BSC4 688 aaKnown RBP19.34■□□□□ 0.69
TUBB3-214ENST00000557490 PIH1D3Q9NQM4 214 aaKnown RBP19.34■□□□□ 0.69
TUBB3-214ENST00000557490 KIAA0100Q14667 2235 aaKnown RBP19.34■□□□□ 0.69
TUBB3-214ENST00000557490 SSC5DA1L4H1 1573 aa19.33■□□□□ 0.69
TUBB3-214ENST00000557490 SMARCA5O60264 1052 aaPredicted RBP19.33■□□□□ 0.68
TUBB3-214ENST00000557490 TCP10Q12799 353 aa19.33■□□□□ 0.68
TUBB3-214ENST00000557490 MAP3K11Q16584 847 aa19.33■□□□□ 0.68
TUBB3-214ENST00000557490 LDLRAD1Q5T700 205 aa19.33■□□□□ 0.68
TUBB3-214ENST00000557490 FBXO46Q6PJ61 603 aaPredicted RBP19.33■□□□□ 0.68
TUBB3-214ENST00000557490 RASAL3Q86YV0 1011 aa19.33■□□□□ 0.68
TUBB3-214ENST00000557490 REM2Q8IYK8 340 aaPredicted RBP19.33■□□□□ 0.68
TUBB3-214ENST00000557490 ZNF384Q8TF68 577 aa19.33■□□□□ 0.68
TUBB3-214ENST00000557490 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.33■□□□□ 0.68
TUBB3-214ENST00000557490 FAM151AQ8WW52 585 aa19.33■□□□□ 0.68
TUBB3-214ENST00000557490 FZD1Q9UP38 647 aa19.33■□□□□ 0.68
TUBB3-214ENST00000557490 CENPFP49454 3210 aa19.32■□□□□ 0.68
TUBB3-214ENST00000557490 USP2O75604 605 aaPredicted RBP19.32■□□□□ 0.68
TUBB3-214ENST00000557490 IDH1O75874 414 aaKnown RBP19.32■□□□□ 0.68
TUBB3-214ENST00000557490 MAP4K4O95819 1239 aaPredicted RBP19.32■□□□□ 0.68
TUBB3-214ENST00000557490 NFIAQ12857 509 aa19.32■□□□□ 0.68
TUBB3-214ENST00000557490 CDAN1Q8IWY9 1227 aa19.32■□□□□ 0.68
TUBB3-214ENST00000557490 RPAP1Q9BWH6 1393 aaPredicted RBP19.32■□□□□ 0.68
TUBB3-214ENST00000557490 UNCXA6NJT0 531 aa19.31■□□□□ 0.68
TUBB3-214ENST00000557490 BAG3O95817 575 aa19.31■□□□□ 0.68
TUBB3-214ENST00000557490 TTF1Q15361 905 aaPredicted RBP19.31■□□□□ 0.68
TUBB3-214ENST00000557490 SLC10A4Q96EP9 437 aa19.31■□□□□ 0.68
TUBB3-214ENST00000557490 IDI2Q9BXS1 227 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms