RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 SGO2Q562F6 1265 aa5.34□□□□□ -1.55
SCFD1-213ENST00000554776 TMC4Q7Z404 712 aa5.34□□□□□ -1.55
SCFD1-213ENST00000554776 SLC51AQ86UW1 340 aa5.34□□□□□ -1.55
SCFD1-213ENST00000554776 CLEC10AQ8IUN9 316 aa5.34□□□□□ -1.55
SCFD1-213ENST00000554776 STK35Q8TDR2 534 aa5.34□□□□□ -1.55
SCFD1-213ENST00000554776 FAM161BQ96MY7 647 aa5.34□□□□□ -1.55
SCFD1-213ENST00000554776 FAM83CQ9BQN1 747 aa5.34□□□□□ -1.55
SCFD1-213ENST00000554776 C7orf69Q9H7B7 122 aa5.34□□□□□ -1.55
SCFD1-213ENST00000554776 RBM47A0AV96 593 aaKnown RBP5.33□□□□□ -1.56
SCFD1-213ENST00000554776 ZNF862O60290 1169 aa5.33□□□□□ -1.56
SCFD1-213ENST00000554776 FBXO24O75426 580 aa5.33□□□□□ -1.56
SCFD1-213ENST00000554776 ARNTP27540 789 aa5.33□□□□□ -1.56
SCFD1-213ENST00000554776 ZNF252P-AS1Q0IIN9 211 aa5.33□□□□□ -1.56
SCFD1-213ENST00000554776 AKAP4Q5JQC9 854 aa5.33□□□□□ -1.56
SCFD1-213ENST00000554776 BEND4Q6ZU67 534 aa5.33□□□□□ -1.56
SCFD1-213ENST00000554776 TRIM42Q8IWZ5 723 aa5.33□□□□□ -1.56
SCFD1-213ENST00000554776 WDR89Q96FK6 387 aaPredicted RBP5.33□□□□□ -1.56
SCFD1-213ENST00000554776 EMILIN2Q9BXX0 1053 aa5.33□□□□□ -1.56
SCFD1-213ENST00000554776 GSX1Q9H4S2 264 aaPredicted RBP5.33□□□□□ -1.56
SCFD1-213ENST00000554776 RAD18Q9NS91 495 aa5.33□□□□□ -1.56
SCFD1-213ENST00000554776 CACNA2D2Q9NY47 1150 aa5.33□□□□□ -1.56
SCFD1-213ENST00000554776 HMX2A2RU54 273 aa5.32□□□□□ -1.56
SCFD1-213ENST00000554776 GSC2O15499 205 aa5.32□□□□□ -1.56
SCFD1-213ENST00000554776 PAGE1O75459 146 aa5.32□□□□□ -1.56
SCFD1-213ENST00000554776 IGLV1-40P01703 118 aa5.32□□□□□ -1.56
SCFD1-213ENST00000554776 LIG1P18858 919 aa5.32□□□□□ -1.56
SCFD1-213ENST00000554776 BMP6P22004 513 aa5.32□□□□□ -1.56
SCFD1-213ENST00000554776 MAP4P27816 1152 aaKnown RBP5.32□□□□□ -1.56
SCFD1-213ENST00000554776 HNRNPUQ00839 825 aaKnown RBP eCLIP5.32□□□□□ -1.56
SCFD1-213ENST00000554776 PSMD2Q13200 908 aa5.32□□□□□ -1.56
SCFD1-213ENST00000554776 KIF4BQ2VIQ3 1234 aa5.32□□□□□ -1.56
SCFD1-213ENST00000554776 CDPF1Q6NVV7 123 aa5.32□□□□□ -1.56
SCFD1-213ENST00000554776 SV2BQ7L1I2 683 aa5.32□□□□□ -1.56
SCFD1-213ENST00000554776 EZH1Q92800 747 aaPredicted RBP5.32□□□□□ -1.56
SCFD1-213ENST00000554776 ZC3H12CQ9C0D7 883 aaKnown RBP5.32□□□□□ -1.56
SCFD1-213ENST00000554776 KCNF1Q9H3M0 494 aa5.32□□□□□ -1.56
SCFD1-213ENST00000554776 TTF2Q9UNY4 1162 aaKnown RBP5.32□□□□□ -1.56
SCFD1-213ENST00000554776 SAMM50Q9Y512 469 aa5.32□□□□□ -1.56
SCFD1-213ENST00000554776 PCDHGC5Q9Y5F6 944 aa5.32□□□□□ -1.56
SCFD1-213ENST00000554776 ACTL7BQ9Y614 415 aa5.32□□□□□ -1.56
SCFD1-213ENST00000554776 TMPRSS2O15393 492 aa5.31□□□□□ -1.56
SCFD1-213ENST00000554776 CELA3AP09093 270 aa5.31□□□□□ -1.56
SCFD1-213ENST00000554776 CTSHP09668 335 aa5.31□□□□□ -1.56
SCFD1-213ENST00000554776 RANGAP1P46060 587 aaPredicted RBP5.31□□□□□ -1.56
SCFD1-213ENST00000554776 RBM25P49756 843 aaKnown RBP5.31□□□□□ -1.56
SCFD1-213ENST00000554776 USP11P51784 963 aa5.31□□□□□ -1.56
SCFD1-213ENST00000554776 XPCQ01831 940 aaPredicted RBP5.31□□□□□ -1.56
SCFD1-213ENST00000554776 NFIAQ12857 509 aa5.31□□□□□ -1.56
SCFD1-213ENST00000554776 MRPL58Q14197 206 aaKnown RBP5.31□□□□□ -1.56
SCFD1-213ENST00000554776 ZNF326Q5BKZ1 582 aaKnown RBP5.31□□□□□ -1.56
SCFD1-213ENST00000554776 RNF43Q68DV7 783 aa5.31□□□□□ -1.56
SCFD1-213ENST00000554776 FBLIM1Q8WUP2 373 aa5.31□□□□□ -1.56
SCFD1-213ENST00000554776 KCNB2Q92953 911 aa5.31□□□□□ -1.56
SCFD1-213ENST00000554776 FAM105AQ9NUU6 356 aa5.31□□□□□ -1.56
SCFD1-213ENST00000554776 CRIM1Q9NZV1 1036 aa5.31□□□□□ -1.56
SCFD1-213ENST00000554776 PPP1R9AQ9ULJ8 1098 aa5.31□□□□□ -1.56
SCFD1-213ENST00000554776 AP4E1Q9UPM8 1137 aa5.31□□□□□ -1.56
SCFD1-213ENST00000554776 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.3□□□□□ -1.56
SCFD1-213ENST00000554776 SLFN14P0C7P3 912 aa5.3□□□□□ -1.56
SCFD1-213ENST00000554776 RXRBP28702 533 aa5.3□□□□□ -1.56
SCFD1-213ENST00000554776 ID3Q02535 119 aa5.3□□□□□ -1.56
SCFD1-213ENST00000554776 ZMYM1Q5SVZ6 1142 aa5.3□□□□□ -1.56
SCFD1-213ENST00000554776 RASIP1Q5U651 963 aa5.3□□□□□ -1.56
SCFD1-213ENST00000554776 MAP1SQ66K74 1059 aaPredicted RBP5.3□□□□□ -1.56
SCFD1-213ENST00000554776 SCARA3Q6AZY7 606 aa5.3□□□□□ -1.56
SCFD1-213ENST00000554776 DYMQ7RTS9 669 aa5.3□□□□□ -1.56
SCFD1-213ENST00000554776 GRIN3AQ8TCU5 1115 aa5.3□□□□□ -1.56
SCFD1-213ENST00000554776 DBNDD2Q9BQY9 259 aa5.3□□□□□ -1.56
SCFD1-213ENST00000554776 YIPF2Q9BWQ6 316 aa5.3□□□□□ -1.56
SCFD1-213ENST00000554776 ACSS3Q9H6R3 686 aa5.3□□□□□ -1.56
SCFD1-213ENST00000554776 CBX8Q9HC52 389 aa5.3□□□□□ -1.56
SCFD1-213ENST00000554776 FAM95CA0A1B0GW59 222 aa5.29□□□□□ -1.56
SCFD1-213ENST00000554776 SORBS3O60504 671 aa5.29□□□□□ -1.56
SCFD1-213ENST00000554776 TRIM37O94972 964 aa5.29□□□□□ -1.56
SCFD1-213ENST00000554776 ASPAP45381 313 aa5.29□□□□□ -1.56
SCFD1-213ENST00000554776 LRRC14Q15048 493 aa5.29□□□□□ -1.56
SCFD1-213ENST00000554776 PCNX4Q63HM2 1172 aa5.29□□□□□ -1.56
SCFD1-213ENST00000554776 LLGL2Q6P1M3 1020 aa5.29□□□□□ -1.56
SCFD1-213ENST00000554776 GPBAR1Q8TDU6 330 aa5.29□□□□□ -1.56
SCFD1-213ENST00000554776 CRELD1Q96HD1 420 aa5.29□□□□□ -1.56
SCFD1-213ENST00000554776 FANCD2OSQ96PS1 177 aa5.29□□□□□ -1.56
SCFD1-213ENST00000554776 ATXN3LQ9H3M9 355 aa5.29□□□□□ -1.56
SCFD1-213ENST00000554776 RNF112Q9ULX5 631 aa5.29□□□□□ -1.56
SCFD1-213ENST00000554776 CYP8B1Q9UNU6 501 aa5.29□□□□□ -1.56
SCFD1-213ENST00000554776 RAB6AP20340 208 aa5.28□□□□□ -1.56
SCFD1-213ENST00000554776 ST13P50502 369 aaKnown RBP5.28□□□□□ -1.56
SCFD1-213ENST00000554776 CCDC85BQ15834 202 aaPredicted RBP5.28□□□□□ -1.56
SCFD1-213ENST00000554776 ZC3H12AQ5D1E8 599 aaKnown RBP5.28□□□□□ -1.56
SCFD1-213ENST00000554776 LDLRAD1Q5T700 205 aa5.28□□□□□ -1.56
SCFD1-213ENST00000554776 MEI1Q5TIA1 1274 aa5.28□□□□□ -1.56
SCFD1-213ENST00000554776 PAOXQ6QHF9 649 aa5.28□□□□□ -1.56
SCFD1-213ENST00000554776 MPRIPQ6WCQ1 1025 aa5.28□□□□□ -1.56
SCFD1-213ENST00000554776 ZDHHC13Q8IUH4 622 aa5.28□□□□□ -1.56
SCFD1-213ENST00000554776 SEMA6CQ9H3T2 930 aa5.28□□□□□ -1.56
SCFD1-213ENST00000554776 MRS2Q9HD23 443 aa5.28□□□□□ -1.56
SCFD1-213ENST00000554776 DISC1Q9NRI5 854 aa5.28□□□□□ -1.56
SCFD1-213ENST00000554776 VTI1BQ9UEU0 232 aa5.28□□□□□ -1.56
SCFD1-213ENST00000554776 USP31Q70CQ4 1352 aa5.28□□□□□ -1.56
SCFD1-213ENST00000554776 UNCXA6NJT0 531 aa5.27□□□□□ -1.57
SCFD1-213ENST00000554776 NFICP08651 508 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms