RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 TMCO3Q6UWJ1 677 aa14.29□□□□□ -0.12
HDAC7-230ENST00000552960 ILDR1Q86SU0 546 aaPredicted RBP14.29□□□□□ -0.12
HDAC7-230ENST00000552960 NLRP10Q86W26 655 aa14.29□□□□□ -0.12
HDAC7-230ENST00000552960 PDILTQ8N807 584 aa14.29□□□□□ -0.12
HDAC7-230ENST00000552960 LLPHQ9BRT6 129 aaKnown RBP14.29□□□□□ -0.12
HDAC7-230ENST00000552960 SNRKQ9NRH2 765 aa14.29□□□□□ -0.12
HDAC7-230ENST00000552960 FKBP4Q02790 459 aaKnown RBP eCLIP14.28□□□□□ -0.12
HDAC7-230ENST00000552960 BARGINQ6ZT62 677 aa14.28□□□□□ -0.12
HDAC7-230ENST00000552960 TEX13AQ9BXU3 409 aaPredicted RBP14.28□□□□□ -0.12
HDAC7-230ENST00000552960 SPTLC2O15270 562 aa14.28□□□□□ -0.12
HDAC7-230ENST00000552960 ZNF202O95125 648 aa14.28□□□□□ -0.12
HDAC7-230ENST00000552960 HMGB1P09429 215 aaKnown RBP14.28□□□□□ -0.12
HDAC7-230ENST00000552960 ADALQ6DHV7 355 aa14.28□□□□□ -0.12
HDAC7-230ENST00000552960 CCDC150Q8NCX0 1101 aa14.28□□□□□ -0.12
HDAC7-230ENST00000552960 CARD6Q9BX69 1037 aa14.28□□□□□ -0.12
HDAC7-230ENST00000552960 PALLDQ8WX93 1383 aa14.28□□□□□ -0.12
HDAC7-230ENST00000552960 TJP1Q07157 1748 aa14.28□□□□□ -0.12
HDAC7-230ENST00000552960 WASHC4Q2M389 1173 aa14.28□□□□□ -0.12
HDAC7-230ENST00000552960 JCADQ9P266 1359 aa14.28□□□□□ -0.12
HDAC7-230ENST00000552960 UTRNP46939 3433 aa14.27□□□□□ -0.12
HDAC7-230ENST00000552960 UBASH3AP57075 661 aa14.27□□□□□ -0.12
HDAC7-230ENST00000552960 FANCCQ00597 558 aa14.27□□□□□ -0.12
HDAC7-230ENST00000552960 CERKQ8TCT0 537 aa14.27□□□□□ -0.12
HDAC7-230ENST00000552960 GREM2Q9H772 168 aa14.27□□□□□ -0.12
HDAC7-230ENST00000552960 ORC3Q9UBD5 711 aaPredicted RBP14.27□□□□□ -0.12
HDAC7-230ENST00000552960 PNMA6AP0CW24 399 aaPredicted RBP14.27□□□□□ -0.13
HDAC7-230ENST00000552960 AMIGO3Q86WK7 504 aa14.27□□□□□ -0.13
HDAC7-230ENST00000552960 KBTBD3Q8NAB2 608 aa14.27□□□□□ -0.13
HDAC7-230ENST00000552960 CCDC34Q96HJ3 373 aa14.27□□□□□ -0.13
HDAC7-230ENST00000552960 OSBPL5Q9H0X9 879 aaPredicted RBP14.27□□□□□ -0.13
HDAC7-230ENST00000552960 ZCCHC17Q9NP64 241 aaKnown RBP14.27□□□□□ -0.13
HDAC7-230ENST00000552960 ARGLU1Q9NWB6 273 aaPredicted RBP14.27□□□□□ -0.13
HDAC7-230ENST00000552960 PAG1Q9NWQ8 432 aa14.27□□□□□ -0.13
HDAC7-230ENST00000552960 CARMIL3Q8ND23 1372 aa14.26□□□□□ -0.13
HDAC7-230ENST00000552960 VPS72Q15906 364 aa14.26□□□□□ -0.13
HDAC7-230ENST00000552960 LINC00301Q8NCQ3 95 aa14.26□□□□□ -0.13
HDAC7-230ENST00000552960 NEK11Q8NG66 645 aa14.26□□□□□ -0.13
HDAC7-230ENST00000552960 CDCA7Q9BWT1 371 aaPredicted RBP14.26□□□□□ -0.13
HDAC7-230ENST00000552960 ZSWIM4Q9H7M6 989 aa14.26□□□□□ -0.13
HDAC7-230ENST00000552960 IMPACTQ9P2X3 320 aa14.26□□□□□ -0.13
HDAC7-230ENST00000552960 TRMT112Q9UI30 125 aaKnown RBP14.26□□□□□ -0.13
HDAC7-230ENST00000552960 SNAP23O00161 211 aa14.26□□□□□ -0.13
HDAC7-230ENST00000552960 HSPD1P10809 573 aaKnown RBP14.26□□□□□ -0.13
HDAC7-230ENST00000552960 AEBP2Q6ZN18 517 aaPredicted RBP14.26□□□□□ -0.13
HDAC7-230ENST00000552960 HAUS7Q99871 368 aa14.26□□□□□ -0.13
HDAC7-230ENST00000552960 WNK3Q9BYP7 1800 aa14.26□□□□□ -0.13
HDAC7-230ENST00000552960 KLF18A0A0U1RQI7 1052 aa14.26□□□□□ -0.13
HDAC7-230ENST00000552960 GOLGA8BA8MQT2 603 aa14.26□□□□□ -0.13
HDAC7-230ENST00000552960 FDPSP14324 419 aaKnown RBP14.26□□□□□ -0.13
HDAC7-230ENST00000552960 RXRAP19793 462 aa14.26□□□□□ -0.13
HDAC7-230ENST00000552960 EIF5P55010 431 aaKnown RBP14.26□□□□□ -0.13
HDAC7-230ENST00000552960 ETF1P62495 437 aaKnown RBP14.26□□□□□ -0.13
HDAC7-230ENST00000552960 FNBP4Q8N3X1 1017 aaPredicted RBP14.26□□□□□ -0.13
HDAC7-230ENST00000552960 LINC00116Q8NCU8 138 aa14.26□□□□□ -0.13
HDAC7-230ENST00000552960 DPF2Q92785 391 aa14.26□□□□□ -0.13
HDAC7-230ENST00000552960 FHOD1Q9Y613 1164 aa14.26□□□□□ -0.13
HDAC7-230ENST00000552960 TEX35Q5T0J7 233 aa14.25□□□□□ -0.13
HDAC7-230ENST00000552960 MEX3CQ5U5Q3 659 aaKnown RBP14.25□□□□□ -0.13
HDAC7-230ENST00000552960 ZBTB38Q8NAP3 1195 aaPredicted RBP14.25□□□□□ -0.13
HDAC7-230ENST00000552960 CCDC87Q9NVE4 849 aa14.25□□□□□ -0.13
HDAC7-230ENST00000552960 ADORA1P30542 326 aa14.25□□□□□ -0.13
HDAC7-230ENST00000552960 SUSD4Q5VX71 490 aa14.25□□□□□ -0.13
HDAC7-230ENST00000552960 CERS3Q8IU89 383 aa14.25□□□□□ -0.13
HDAC7-230ENST00000552960 ZFP91Q96JP5 570 aaPredicted RBP14.25□□□□□ -0.13
HDAC7-230ENST00000552960 CALCOCO1Q9P1Z2 691 aa14.25□□□□□ -0.13
HDAC7-230ENST00000552960 IFIT1P09914 478 aaKnown RBP14.24□□□□□ -0.13
HDAC7-230ENST00000552960 PFKFB1P16118 471 aa14.24□□□□□ -0.13
HDAC7-230ENST00000552960 RTEL1Q9NZ71 1219 aa14.24□□□□□ -0.13
HDAC7-230ENST00000552960 H2AFXP16104 143 aaPredicted RBP14.24□□□□□ -0.13
HDAC7-230ENST00000552960 IL6STP40189 918 aaPredicted RBP14.24□□□□□ -0.13
HDAC7-230ENST00000552960 HNRNPH2P55795 449 aaKnown RBP14.24□□□□□ -0.13
HDAC7-230ENST00000552960 NLRP12P59046 1061 aa14.24□□□□□ -0.13
HDAC7-230ENST00000552960 CCDC24Q8N4L8 307 aa14.24□□□□□ -0.13
HDAC7-230ENST00000552960 KCNG4Q8TDN1 519 aa14.24□□□□□ -0.13
HDAC7-230ENST00000552960 L2HGDHQ9H9P8 463 aa14.24□□□□□ -0.13
HDAC7-230ENST00000552960 IRS4O14654 1257 aaPredicted RBP14.24□□□□□ -0.13
HDAC7-230ENST00000552960 PCCAP05165 728 aaPredicted RBP14.24□□□□□ -0.13
HDAC7-230ENST00000552960 TOP1P11387 765 aaKnown RBP14.24□□□□□ -0.13
HDAC7-230ENST00000552960 CCDC57Q2TAC2 916 aa14.24□□□□□ -0.13
HDAC7-230ENST00000552960 MYSM1Q5VVJ2 828 aa14.24□□□□□ -0.13
HDAC7-230ENST00000552960 AIFM3Q96NN9 605 aa14.24□□□□□ -0.13
HDAC7-230ENST00000552960 TRIM34Q9BYJ4 488 aa14.24□□□□□ -0.13
HDAC7-230ENST00000552960 MYH14Q7Z406 1995 aaKnown RBP14.24□□□□□ -0.13
HDAC7-230ENST00000552960 PSDA5PKW4 1024 aaPredicted RBP14.23□□□□□ -0.13
HDAC7-230ENST00000552960 TMEM232C9JQI7 657 aa14.23□□□□□ -0.13
HDAC7-230ENST00000552960 SYKP43405 635 aa14.23□□□□□ -0.13
HDAC7-230ENST00000552960 PLA2G4AP47712 749 aa14.23□□□□□ -0.13
HDAC7-230ENST00000552960 EVCP57679 992 aa14.23□□□□□ -0.13
HDAC7-230ENST00000552960 GNG11P61952 73 aa14.23□□□□□ -0.13
HDAC7-230ENST00000552960 EXOSC10Q01780 885 aaKnown RBP14.23□□□□□ -0.13
HDAC7-230ENST00000552960 PNOCQ13519 176 aa14.23□□□□□ -0.13
HDAC7-230ENST00000552960 PI16Q6UXB8 463 aa14.23□□□□□ -0.13
HDAC7-230ENST00000552960 HELBQ8NG08 1087 aaPredicted RBP14.23□□□□□ -0.13
HDAC7-230ENST00000552960 TTLL11Q8NHH1 800 aa14.23□□□□□ -0.13
HDAC7-230ENST00000552960 EYA2O00167 538 aa14.23□□□□□ -0.13
HDAC7-230ENST00000552960 TAF7LQ5H9L4 462 aa14.23□□□□□ -0.13
HDAC7-230ENST00000552960 SPECC1Q5M775 1068 aa14.23□□□□□ -0.13
HDAC7-230ENST00000552960 BICDL1Q6ZP65 573 aa14.23□□□□□ -0.13
HDAC7-230ENST00000552960 ITGA6P23229 1130 aa14.22□□□□□ -0.13
HDAC7-230ENST00000552960 GYS2P54840 703 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms