RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 NSUN4Q96CB9 384 aaKnown RBP31.65■■■□□ 2.66
CPSF6-205ENST00000550075 THSD7BQ9C0I4 1608 aa31.64■■■□□ 2.66
CPSF6-205ENST00000550075 PPP1R12BO60237 982 aaPredicted RBP31.64■■■□□ 2.66
CPSF6-205ENST00000550075 CACNB3P54284 484 aa31.64■■■□□ 2.66
CPSF6-205ENST00000550075 CDC42EP5Q6NZY7 148 aa31.64■■■□□ 2.66
CPSF6-205ENST00000550075 NOL10Q9BSC4 688 aaKnown RBP31.64■■■□□ 2.66
CPSF6-205ENST00000550075 RGMBQ6NW40 437 aa31.63■■■□□ 2.65
CPSF6-205ENST00000550075 USP40Q9NVE5 1235 aa31.63■■■□□ 2.65
CPSF6-205ENST00000550075 RPAP1Q9BWH6 1393 aaPredicted RBP31.63■■■□□ 2.65
CPSF6-205ENST00000550075 SSC5DA1L4H1 1573 aa31.62■■■□□ 2.65
CPSF6-205ENST00000550075 SMARCA5O60264 1052 aaPredicted RBP31.62■■■□□ 2.65
CPSF6-205ENST00000550075 BTDP43251 543 aa31.62■■■□□ 2.65
CPSF6-205ENST00000550075 HDAC1Q13547 482 aaPredicted RBP31.62■■■□□ 2.65
CPSF6-205ENST00000550075 NAA16Q6N069 864 aaPredicted RBP31.62■■■□□ 2.65
CPSF6-205ENST00000550075 HOOK2Q96ED9 719 aa31.62■■■□□ 2.65
CPSF6-205ENST00000550075 ZBTB47Q9UFB7 747 aaPredicted RBP31.62■■■□□ 2.65
CPSF6-205ENST00000550075 DOCK2Q92608 1830 aa31.61■■■□□ 2.65
CPSF6-205ENST00000550075 TTF1Q15361 905 aaPredicted RBP31.61■■■□□ 2.65
CPSF6-205ENST00000550075 NBPF12Q5TAG4 269 aaPredicted RBP31.61■■■□□ 2.65
CPSF6-205ENST00000550075 EXOC6Q8TAG9 804 aa31.61■■■□□ 2.65
CPSF6-205ENST00000550075 GPATCH3Q96I76 525 aa31.61■■■□□ 2.65
CPSF6-205ENST00000550075 TMEM39BQ9GZU3 492 aa31.61■■■□□ 2.65
CPSF6-205ENST00000550075 MAP4K4O95819 1239 aaPredicted RBP31.6■■■□□ 2.65
CPSF6-205ENST00000550075 ZNF157P51786 506 aaPredicted RBP31.6■■■□□ 2.65
CPSF6-205ENST00000550075 PRKG1Q13976 671 aa31.6■■■□□ 2.65
CPSF6-205ENST00000550075 TMED8Q6PL24 325 aaPredicted RBP31.6■■■□□ 2.65
CPSF6-205ENST00000550075 CCDC102AQ96A19 550 aa31.6■■■□□ 2.65
CPSF6-205ENST00000550075 PIH1D3Q9NQM4 214 aaKnown RBP31.6■■■□□ 2.65
CPSF6-205ENST00000550075 MYO5AQ9Y4I1 1855 aaKnown RBP31.59■■■□□ 2.65
CPSF6-205ENST00000550075 GPR75-ASB3A0A0A6YYF3 556 aa31.59■■■□□ 2.65
CPSF6-205ENST00000550075 IDH1O75874 414 aaKnown RBP31.59■■■□□ 2.65
CPSF6-205ENST00000550075 NOGQ13253 232 aa31.59■■■□□ 2.65
CPSF6-205ENST00000550075 ZNF384Q8TF68 577 aa31.59■■■□□ 2.65
CPSF6-205ENST00000550075 ANGEL1Q9UNK9 670 aaKnown RBP31.59■■■□□ 2.65
CPSF6-205ENST00000550075 UBE2Q2LH0YL09 131 aa31.58■■■□□ 2.65
CPSF6-205ENST00000550075 MAP3K12Q12852 859 aa31.58■■■□□ 2.65
CPSF6-205ENST00000550075 MOB2Q70IA6 237 aa31.58■■■□□ 2.65
CPSF6-205ENST00000550075 FAM151AQ8WW52 585 aa31.58■■■□□ 2.65
CPSF6-205ENST00000550075 GCC1Q96CN9 775 aa31.58■■■□□ 2.65
CPSF6-205ENST00000550075 TEPSINQ96N21 525 aa31.58■■■□□ 2.65
CPSF6-205ENST00000550075 ATP5JP18859 108 aa31.57■■■□□ 2.64
CPSF6-205ENST00000550075 MAP2K2P36507 400 aa31.57■■■□□ 2.64
CPSF6-205ENST00000550075 IREB2P48200 963 aaKnown RBP31.57■■■□□ 2.64
CPSF6-205ENST00000550075 DNAJC2Q99543 621 aaKnown RBP31.57■■■□□ 2.64
CPSF6-205ENST00000550075 BAG3O95817 575 aa31.56■■■□□ 2.64
CPSF6-205ENST00000550075 MAP3K11Q16584 847 aa31.56■■■□□ 2.64
CPSF6-205ENST00000550075 IDI2Q9BXS1 227 aa31.56■■■□□ 2.64
CPSF6-205ENST00000550075 RWDD1Q9H446 243 aaPredicted RBP31.56■■■□□ 2.64
CPSF6-205ENST00000550075 NDUFB9Q9Y6M9 179 aa31.56■■■□□ 2.64
CPSF6-205ENST00000550075 RFX7Q2KHR2 1363 aa31.56■■■□□ 2.64
CPSF6-205ENST00000550075 UNCXA6NJT0 531 aa31.55■■■□□ 2.64
CPSF6-205ENST00000550075 ENTPD3O75355 529 aa31.55■■■□□ 2.64
CPSF6-205ENST00000550075 PLCG2P16885 1265 aa31.55■■■□□ 2.64
CPSF6-205ENST00000550075 AK9Q5TCS8 1911 aa31.55■■■□□ 2.64
CPSF6-205ENST00000550075 SLC10A3P09131 477 aa31.54■■■□□ 2.64
CPSF6-205ENST00000550075 MAP2K1Q02750 393 aaPredicted RBP31.54■■■□□ 2.64
CPSF6-205ENST00000550075 TCP10Q12799 353 aa31.54■■■□□ 2.64
CPSF6-205ENST00000550075 NFIAQ12857 509 aa31.54■■■□□ 2.64
CPSF6-205ENST00000550075 ECHDC1Q9NTX5 307 aa31.54■■■□□ 2.64
CPSF6-205ENST00000550075 GOLIM4O00461 696 aa31.53■■■□□ 2.64
CPSF6-205ENST00000550075 RGS3P49796 1198 aa31.53■■■□□ 2.64
CPSF6-205ENST00000550075 LDLRAD1Q5T700 205 aa31.53■■■□□ 2.64
CPSF6-205ENST00000550075 DCAF15Q66K64 600 aa31.53■■■□□ 2.64
CPSF6-205ENST00000550075 CERS3Q8IU89 383 aa31.53■■■□□ 2.64
CPSF6-205ENST00000550075 BOLA2Q9H3K6 86 aa31.53■■■□□ 2.64
CPSF6-205ENST00000550075 ANTXR1Q9H6X2 564 aa31.53■■■□□ 2.64
CPSF6-205ENST00000550075 FAM198AQ9UFP1 575 aa31.53■■■□□ 2.64
CPSF6-205ENST00000550075 AOC2O75106 756 aa31.52■■■□□ 2.64
CPSF6-205ENST00000550075 CYP7A1P22680 504 aa31.52■■■□□ 2.64
CPSF6-205ENST00000550075 RHBDL3P58872 404 aa31.52■■■□□ 2.64
CPSF6-205ENST00000550075 RASAL3Q86YV0 1011 aa31.52■■■□□ 2.64
CPSF6-205ENST00000550075 CDAN1Q8IWY9 1227 aa31.52■■■□□ 2.64
CPSF6-205ENST00000550075 HAUS7Q99871 368 aa31.52■■■□□ 2.64
CPSF6-205ENST00000550075 PAG1Q9NWQ8 432 aa31.52■■■□□ 2.64
CPSF6-205ENST00000550075 WDHD1O75717 1129 aaPredicted RBP31.51■■■□□ 2.63
CPSF6-205ENST00000550075 TEX11Q8IYF3 940 aa31.51■■■□□ 2.63
CPSF6-205ENST00000550075 MAGEB6Q8N7X4 407 aa31.51■■■□□ 2.63
CPSF6-205ENST00000550075 AIDAQ96BJ3 306 aa31.51■■■□□ 2.63
CPSF6-205ENST00000550075 FAM155AB1AL88 458 aaPredicted RBP31.5■■■□□ 2.63
CPSF6-205ENST00000550075 NPM3O75607 178 aaKnown RBP31.5■■■□□ 2.63
CPSF6-205ENST00000550075 PICALMQ13492 652 aa31.5■■■□□ 2.63
CPSF6-205ENST00000550075 ANKRD13AQ8IZ07 590 aa31.5■■■□□ 2.63
CPSF6-205ENST00000550075 AATFQ9NY61 560 aaKnown RBP eCLIP31.5■■■□□ 2.63
CPSF6-205ENST00000550075 FZD1Q9UP38 647 aa31.5■■■□□ 2.63
CPSF6-205ENST00000550075 OTOFQ9HC10 1997 aa31.5■■■□□ 2.63
CPSF6-205ENST00000550075 USP2O75604 605 aaPredicted RBP31.49■■■□□ 2.63
CPSF6-205ENST00000550075 HSPA1AP0DMV8 641 aaKnown RBP31.49■■■□□ 2.63
CPSF6-205ENST00000550075 HSPA1BP0DMV9 641 aaKnown RBP31.49■■■□□ 2.63
CPSF6-205ENST00000550075 PPP4CP60510 307 aa31.49■■■□□ 2.63
CPSF6-205ENST00000550075 ANKRD45Q5TZF3 282 aa31.49■■■□□ 2.63
CPSF6-205ENST00000550075 ZSCAN29Q8IWY8 852 aaPredicted RBP31.49■■■□□ 2.63
CPSF6-205ENST00000550075 BEGAINQ9BUH8 593 aa31.48■■■□□ 2.63
CPSF6-205ENST00000550075 DDX24Q9GZR7 859 aaKnown RBP eCLIP31.48■■■□□ 2.632e-10■■□□□ 13
CPSF6-205ENST00000550075 TTC41PQ6P2S7 1318 aa31.48■■■□□ 2.63
CPSF6-205ENST00000550075 COL2A1P02458 1487 aaPredicted RBP31.47■■■□□ 2.63
CPSF6-205ENST00000550075 IRX6P78412 446 aaPredicted RBP31.47■■■□□ 2.63
CPSF6-205ENST00000550075 SLC10A4Q96EP9 437 aa31.47■■■□□ 2.63
CPSF6-205ENST00000550075 ERC2O15083 957 aa31.46■■■□□ 2.63
CPSF6-205ENST00000550075 ADGRA1Q86SQ6 560 aa31.46■■■□□ 2.63
CPSF6-205ENST00000550075 SH3RF3Q8TEJ3 882 aaPredicted RBP31.46■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms