RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 ZNF333Q96JL9 665 aa3.38□□□□□ -1.87
TRAV1-1-201ENST00000542354 CYLDQ9NQC7 956 aa3.38□□□□□ -1.87
TRAV1-1-201ENST00000542354 ACACBO00763 2458 aa3.38□□□□□ -1.87
TRAV1-1-201ENST00000542354 DICER1Q9UPY3 1922 aaKnown RBP3.38□□□□□ -1.87
TRAV1-1-201ENST00000542354 SLIT3O75094 1523 aa3.38□□□□□ -1.87
TRAV1-1-201ENST00000542354 CNTNAP5Q8WYK1 1306 aa3.38□□□□□ -1.87
TRAV1-1-201ENST00000542354 FAM208BQ5VWN6 2430 aa3.38□□□□□ -1.87
TRAV1-1-201ENST00000542354 EIF3AQ14152 1382 aaKnown RBP3.38□□□□□ -1.87
TRAV1-1-201ENST00000542354 CEP162Q5TB80 1403 aa3.37□□□□□ -1.87
TRAV1-1-201ENST00000542354 ZBBXA8MT70 800 aa3.37□□□□□ -1.87
TRAV1-1-201ENST00000542354 WASLO00401 505 aaPredicted RBP3.37□□□□□ -1.87
TRAV1-1-201ENST00000542354 C21orf2O43822 256 aa3.37□□□□□ -1.87
TRAV1-1-201ENST00000542354 LILRA1O75019 489 aa3.37□□□□□ -1.87
TRAV1-1-201ENST00000542354 GNRH1P01148 92 aa3.37□□□□□ -1.87
TRAV1-1-201ENST00000542354 GYS1P13807 737 aa3.37□□□□□ -1.87
TRAV1-1-201ENST00000542354 RFC4P35249 363 aa3.37□□□□□ -1.87
TRAV1-1-201ENST00000542354 SLC9C1Q4G0N8 1177 aa3.37□□□□□ -1.87
TRAV1-1-201ENST00000542354 XP32Q5T750 250 aa3.37□□□□□ -1.87
TRAV1-1-201ENST00000542354 NBPF10Q6P3W6 841 aaKnown RBP3.37□□□□□ -1.87
TRAV1-1-201ENST00000542354 CDC37L1Q7L3B6 337 aa3.37□□□□□ -1.87
TRAV1-1-201ENST00000542354 LURAP1LQ8IV03 231 aa3.37□□□□□ -1.87
TRAV1-1-201ENST00000542354 LRRN4Q8WUT4 740 aa3.37□□□□□ -1.87
TRAV1-1-201ENST00000542354 MYLIPQ8WY64 445 aa3.37□□□□□ -1.87
TRAV1-1-201ENST00000542354 SMARCC1Q92922 1105 aaPredicted RBP3.37□□□□□ -1.87
TRAV1-1-201ENST00000542354 FBXL18Q96ME1 805 aa3.37□□□□□ -1.87
TRAV1-1-201ENST00000542354 SEMA6BQ9H3T3 888 aa3.37□□□□□ -1.87
TRAV1-1-201ENST00000542354 PRM3Q9NNZ6 103 aa3.37□□□□□ -1.87
TRAV1-1-201ENST00000542354 TMPRSS4Q9NRS4 437 aa3.37□□□□□ -1.87
TRAV1-1-201ENST00000542354 NLRP2Q9NX02 1062 aa3.37□□□□□ -1.87
TRAV1-1-201ENST00000542354 ATXN7L1Q9ULK2 861 aaPredicted RBP3.37□□□□□ -1.87
TRAV1-1-201ENST00000542354 RTCBQ9Y3I0 505 aaKnown RBP3.37□□□□□ -1.87
TRAV1-1-201ENST00000542354 PCDHB9Q9Y5E1 797 aa3.37□□□□□ -1.87
TRAV1-1-201ENST00000542354 WNK3Q9BYP7 1800 aa3.37□□□□□ -1.87
TRAV1-1-201ENST00000542354 ZFHX4Q86UP3 3567 aa3.37□□□□□ -1.87
TRAV1-1-201ENST00000542354 C5P01031 1676 aa3.36□□□□□ -1.87
TRAV1-1-201ENST00000542354 C4AP0C0L4 1744 aa3.36□□□□□ -1.87
TRAV1-1-201ENST00000542354 ZFHX2Q9C0A1 2572 aaPredicted RBP3.36□□□□□ -1.87
TRAV1-1-201ENST00000542354 A0A1W2PRU2 124 aa3.36□□□□□ -1.87
TRAV1-1-201ENST00000542354 PROCP04070 461 aa3.36□□□□□ -1.87
TRAV1-1-201ENST00000542354 USP17L8P0C7I0 530 aa3.36□□□□□ -1.87
TRAV1-1-201ENST00000542354 BMP4P12644 408 aa3.36□□□□□ -1.87
TRAV1-1-201ENST00000542354 RHOQP17081 205 aa3.36□□□□□ -1.87
TRAV1-1-201ENST00000542354 EPS15P42566 896 aa3.36□□□□□ -1.87
TRAV1-1-201ENST00000542354 ERVK-9P63128 1117 aa3.36□□□□□ -1.87
TRAV1-1-201ENST00000542354 SAFB2Q14151 953 aaKnown RBP eCLIP3.36□□□□□ -1.87
TRAV1-1-201ENST00000542354 DBN1Q16643 649 aa3.36□□□□□ -1.87
TRAV1-1-201ENST00000542354 SOGA3Q5TF21 947 aa3.36□□□□□ -1.87
TRAV1-1-201ENST00000542354 TMEM132EQ6IEE7 984 aa3.36□□□□□ -1.87
TRAV1-1-201ENST00000542354 C2CD5Q86YS7 1000 aa3.36□□□□□ -1.87
TRAV1-1-201ENST00000542354 ACDQ96AP0 544 aa3.36□□□□□ -1.87
TRAV1-1-201ENST00000542354 ERO1AQ96HE7 468 aa3.36□□□□□ -1.87
TRAV1-1-201ENST00000542354 GLIS2Q9BZE0 524 aaPredicted RBP3.36□□□□□ -1.87
TRAV1-1-201ENST00000542354 UBE2OQ9C0C9 1292 aaKnown RBP3.36□□□□□ -1.87
TRAV1-1-201ENST00000542354 RPGRIP1LQ68CZ1 1315 aa3.36□□□□□ -1.87
TRAV1-1-201ENST00000542354 ZNF541Q9H0D2 1346 aa3.36□□□□□ -1.87
TRAV1-1-201ENST00000542354 HTTP42858 3142 aa3.36□□□□□ -1.87
TRAV1-1-201ENST00000542354 C5orf42Q9H799 3197 aa3.36□□□□□ -1.87
TRAV1-1-201ENST00000542354 POLR3AO14802 1390 aaPredicted RBP3.36□□□□□ -1.87
TRAV1-1-201ENST00000542354 NSD2O96028 1365 aa3.36□□□□□ -1.87
TRAV1-1-201ENST00000542354 PALLDQ8WX93 1383 aa3.36□□□□□ -1.87
TRAV1-1-201ENST00000542354 PRR33A8MZF0 331 aa3.35□□□□□ -1.87
TRAV1-1-201ENST00000542354 ID4P47928 161 aa3.35□□□□□ -1.87
TRAV1-1-201ENST00000542354 TM4SF4P48230 202 aa3.35□□□□□ -1.87
TRAV1-1-201ENST00000542354 GRIN2CQ14957 1233 aa3.35□□□□□ -1.87
TRAV1-1-201ENST00000542354 ARHGEF6Q15052 776 aa3.35□□□□□ -1.87
TRAV1-1-201ENST00000542354 TMEM214Q6NUQ4 689 aaKnown RBP3.35□□□□□ -1.87
TRAV1-1-201ENST00000542354 SLCO4C1Q6ZQN7 724 aa3.35□□□□□ -1.87
TRAV1-1-201ENST00000542354 C1orf216Q8TAB5 229 aa3.35□□□□□ -1.87
TRAV1-1-201ENST00000542354 EDARADDQ8WWZ3 215 aa3.35□□□□□ -1.87
TRAV1-1-201ENST00000542354 ZNF622Q969S3 477 aaKnown RBP eCLIP3.35□□□□□ -1.87
TRAV1-1-201ENST00000542354 UIMC1Q96RL1 719 aa3.35□□□□□ -1.87
TRAV1-1-201ENST00000542354 EFCC1Q9HA90 598 aa3.35□□□□□ -1.87
TRAV1-1-201ENST00000542354 GBA2Q9HCG7 927 aaPredicted RBP3.35□□□□□ -1.87
TRAV1-1-201ENST00000542354 POGKQ9P215 609 aa3.35□□□□□ -1.87
TRAV1-1-201ENST00000542354 THEGQ9P2T0 379 aa3.35□□□□□ -1.87
TRAV1-1-201ENST00000542354 GJA3Q9Y6H8 435 aa3.35□□□□□ -1.87
TRAV1-1-201ENST00000542354 C4BP0C0L5 1744 aa3.35□□□□□ -1.87
TRAV1-1-201ENST00000542354 ANKRD30AQ9BXX3 1397 aa3.35□□□□□ -1.87
TRAV1-1-201ENST00000542354 SCN11AQ9UI33 1791 aa3.35□□□□□ -1.87
TRAV1-1-201ENST00000542354 ASH1LQ9NR48 2969 aaKnown RBP3.35□□□□□ -1.87
TRAV1-1-201ENST00000542354 MYOM3Q5VTT5 1437 aa3.35□□□□□ -1.87
TRAV1-1-201ENST00000542354 SMG6Q86US8 1419 aaKnown RBP3.35□□□□□ -1.87
TRAV1-1-201ENST00000542354 UBR3Q6ZT12 1888 aa3.35□□□□□ -1.87
TRAV1-1-201ENST00000542354 IFT172Q9UG01 1749 aa3.34□□□□□ -1.87
TRAV1-1-201ENST00000542354 FAM86C2PA6NEL3 165 aa3.34□□□□□ -1.87
TRAV1-1-201ENST00000542354 FZD9O00144 591 aa3.34□□□□□ -1.87
TRAV1-1-201ENST00000542354 EIF6P56537 245 aaKnown RBP3.34□□□□□ -1.87
TRAV1-1-201ENST00000542354 POU4F2Q12837 409 aa3.34□□□□□ -1.87
TRAV1-1-201ENST00000542354 ST3GAL2Q16842 350 aa3.34□□□□□ -1.87
TRAV1-1-201ENST00000542354 UBE2Q1Q7Z7E8 422 aa3.34□□□□□ -1.87
TRAV1-1-201ENST00000542354 Q8N3U1 123 aa3.34□□□□□ -1.87
TRAV1-1-201ENST00000542354 LINC00116Q8NCU8 138 aa3.34□□□□□ -1.87
TRAV1-1-201ENST00000542354 PCMTD1Q96MG8 357 aaPredicted RBP3.34□□□□□ -1.87
TRAV1-1-201ENST00000542354 NECAB3Q96P71 396 aaPredicted RBP3.34□□□□□ -1.87
TRAV1-1-201ENST00000542354 PRAM1Q96QH2 718 aa3.34□□□□□ -1.87
TRAV1-1-201ENST00000542354 NACC1Q96RE7 527 aa3.34□□□□□ -1.87
TRAV1-1-201ENST00000542354 ZSCAN10Q96SZ4 725 aaPredicted RBP3.34□□□□□ -1.87
TRAV1-1-201ENST00000542354 ESYT1Q9BSJ8 1104 aa3.34□□□□□ -1.87
TRAV1-1-201ENST00000542354 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.34□□□□□ -1.87
TRAV1-1-201ENST00000542354 GRIP2Q9C0E4 1043 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms