RNA–Protein interactions for RNA: ENST00000528653.1

EIF3F-202, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

TSL 2

Gene EIF3F, Length 739 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-202ENST00000528653 USP50Q70EL3 339 aaPredicted RBP16.51■□□□□ 0.23
EIF3F-202ENST00000528653 MIGA1Q8NAN2 632 aa16.51■□□□□ 0.23
EIF3F-202ENST00000528653 FAM163AQ96GL9 167 aaPredicted RBP16.51■□□□□ 0.23
EIF3F-202ENST00000528653 AATFQ9NY61 560 aaKnown RBP eCLIP16.51■□□□□ 0.23
EIF3F-202ENST00000528653 GPR75-ASB3A0A0A6YYF3 556 aa16.5■□□□□ 0.23
EIF3F-202ENST00000528653 CLRN2A0PK11 232 aa16.5■□□□□ 0.23
EIF3F-202ENST00000528653 POTEIP0CG38 1075 aa16.5■□□□□ 0.23
EIF3F-202ENST00000528653 POTEJP0CG39 1038 aa16.5■□□□□ 0.23
EIF3F-202ENST00000528653 DYNLL1P63167 89 aaKnown RBP16.5■□□□□ 0.23
EIF3F-202ENST00000528653 UBE3CQ15386 1083 aa16.5■□□□□ 0.23
EIF3F-202ENST00000528653 TMED8Q6PL24 325 aaPredicted RBP16.5■□□□□ 0.23
EIF3F-202ENST00000528653 PNMA8AQ86V59 439 aaPredicted RBP16.5■□□□□ 0.23
EIF3F-202ENST00000528653 APPBP2Q92624 585 aa16.5■□□□□ 0.23
EIF3F-202ENST00000528653 NOL10Q9BSC4 688 aaKnown RBP16.5■□□□□ 0.23
EIF3F-202ENST00000528653 TDRD3Q9H7E2 651 aaKnown RBP16.5■□□□□ 0.23
EIF3F-202ENST00000528653 GGA3Q9NZ52 723 aa16.5■□□□□ 0.23
EIF3F-202ENST00000528653 MYO1BO43795 1136 aa16.49■□□□□ 0.23
EIF3F-202ENST00000528653 SPDYE2Q495Y8 402 aa16.49■□□□□ 0.23
EIF3F-202ENST00000528653 CDC42EP5Q6NZY7 148 aa16.49■□□□□ 0.23
EIF3F-202ENST00000528653 CDK5RAP2Q96SN8 1893 aa16.49■□□□□ 0.23
EIF3F-202ENST00000528653 DIAPH3Q9NSV4 1193 aa16.49■□□□□ 0.23
EIF3F-202ENST00000528653 ZNF70Q9UC06 446 aaPredicted RBP16.49■□□□□ 0.23
EIF3F-202ENST00000528653 A0A0D9SFI3 127 aa16.48■□□□□ 0.23
EIF3F-202ENST00000528653 MAGEB6P1A0A0J9YX57 407 aa16.48■□□□□ 0.23
EIF3F-202ENST00000528653 MBD4O95243 580 aa16.48■□□□□ 0.23
EIF3F-202ENST00000528653 BAG3O95817 575 aa16.48■□□□□ 0.23
EIF3F-202ENST00000528653 CACNB3P54284 484 aa16.48■□□□□ 0.23
EIF3F-202ENST00000528653 NMIQ13287 307 aaPredicted RBP16.48■□□□□ 0.23
EIF3F-202ENST00000528653 ZMYM1Q5SVZ6 1142 aa16.48■□□□□ 0.23
EIF3F-202ENST00000528653 ANGEL2Q5VTE6 544 aaKnown RBP16.48■□□□□ 0.23
EIF3F-202ENST00000528653 SH3RF3Q8TEJ3 882 aaPredicted RBP16.48■□□□□ 0.23
EIF3F-202ENST00000528653 OSBP2Q969R2 916 aa16.48■□□□□ 0.23
EIF3F-202ENST00000528653 FAM227BQ96M60 508 aa16.48■□□□□ 0.23
EIF3F-202ENST00000528653 VEZTQ9HBM0 779 aa16.48■□□□□ 0.23
EIF3F-202ENST00000528653 USP40Q9NVE5 1235 aa16.48■□□□□ 0.23
EIF3F-202ENST00000528653 TMOD2Q9NZR1 351 aa16.48■□□□□ 0.23
EIF3F-202ENST00000528653 CLEC11AQ9Y240 323 aa16.48■□□□□ 0.23
EIF3F-202ENST00000528653 M0R2C6 588 aa16.47■□□□□ 0.23
EIF3F-202ENST00000528653 RHBDL3P58872 404 aa16.47■□□□□ 0.23
EIF3F-202ENST00000528653 LDHDQ86WU2 507 aa16.47■□□□□ 0.23
EIF3F-202ENST00000528653 TEX11Q8IYF3 940 aa16.47■□□□□ 0.23
EIF3F-202ENST00000528653 LCORLQ8N3X6 602 aa16.47■□□□□ 0.23
EIF3F-202ENST00000528653 SEC62Q99442 399 aaKnown RBP16.47■□□□□ 0.23
EIF3F-202ENST00000528653 RIOK1Q9BRS2 568 aaKnown RBP16.47■□□□□ 0.23
EIF3F-202ENST00000528653 PUS7LQ9H0K6 701 aaKnown RBP16.47■□□□□ 0.23
EIF3F-202ENST00000528653 ARMT1Q9H993 441 aa16.47■□□□□ 0.23
EIF3F-202ENST00000528653 FOCADQ5VW36 1801 aa16.47■□□□□ 0.23
EIF3F-202ENST00000528653 NAV1Q8NEY1 1877 aa16.46■□□□□ 0.23
EIF3F-202ENST00000528653 POLR2AP24928 1970 aaKnown RBP16.46■□□□□ 0.23
EIF3F-202ENST00000528653 HIP1O00291 1037 aa16.46■□□□□ 0.23
EIF3F-202ENST00000528653 PPP4CP60510 307 aa16.46■□□□□ 0.23
EIF3F-202ENST00000528653 TICAM2Q86XR7 235 aa16.46■□□□□ 0.23
EIF3F-202ENST00000528653 AIDAQ96BJ3 306 aa16.46■□□□□ 0.23
EIF3F-202ENST00000528653 SCAF8Q9UPN6 1271 aaKnown RBP16.46■□□□□ 0.23
EIF3F-202ENST00000528653 TCP10L2B9ZVM9 353 aa16.45■□□□□ 0.22
EIF3F-202ENST00000528653 GPAA1O43292 621 aa16.45■□□□□ 0.22
EIF3F-202ENST00000528653 TOMM70O94826 608 aa16.45■□□□□ 0.22
EIF3F-202ENST00000528653 PLCG2P16885 1265 aa16.45■□□□□ 0.22
EIF3F-202ENST00000528653 CHMLP26374 656 aa16.45■□□□□ 0.22
EIF3F-202ENST00000528653 NFIAQ12857 509 aa16.45■□□□□ 0.22
EIF3F-202ENST00000528653 CWC27Q6UX04 472 aaKnown RBP16.45■□□□□ 0.22
EIF3F-202ENST00000528653 CCDC129Q6ZRS4 1044 aa16.45■□□□□ 0.22
EIF3F-202ENST00000528653 ZC3H15Q8WU90 426 aaKnown RBP16.45■□□□□ 0.22
EIF3F-202ENST00000528653 PITPNM2Q9BZ72 1349 aa16.45■□□□□ 0.22
EIF3F-202ENST00000528653 WDHD1O75717 1129 aaPredicted RBP16.44■□□□□ 0.22
EIF3F-202ENST00000528653 PICALMQ13492 652 aa16.44■□□□□ 0.22
EIF3F-202ENST00000528653 MAP1SQ66K74 1059 aaPredicted RBP16.44■□□□□ 0.22
EIF3F-202ENST00000528653 CERS3Q8IU89 383 aa16.44■□□□□ 0.22
EIF3F-202ENST00000528653 APOBEC3FQ8IUX4 373 aaKnown RBP16.44■□□□□ 0.22
EIF3F-202ENST00000528653 DCPSQ96C86 337 aaKnown RBP16.44■□□□□ 0.22
EIF3F-202ENST00000528653 CRNKL1Q9BZJ0 848 aaKnown RBP16.44■□□□□ 0.22
EIF3F-202ENST00000528653 HELLSQ9NRZ9 838 aa16.44■□□□□ 0.22
EIF3F-202ENST00000528653 PGAP2Q9UHJ9 254 aa16.44■□□□□ 0.22
EIF3F-202ENST00000528653 DDX60LQ5H9U9 1706 aaKnown RBP16.44■□□□□ 0.22
EIF3F-202ENST00000528653 ADM5C9JUS6 153 aa16.43■□□□□ 0.22
EIF3F-202ENST00000528653 CDC45O75419 566 aa16.43■□□□□ 0.22
EIF3F-202ENST00000528653 ZNF589Q86UQ0 364 aaPredicted RBP16.43■□□□□ 0.22
EIF3F-202ENST00000528653 MAPKAPK5Q8IW41 473 aa16.43■□□□□ 0.22
EIF3F-202ENST00000528653 GLIS2Q9BZE0 524 aaPredicted RBP16.43■□□□□ 0.22
EIF3F-202ENST00000528653 DDX4Q9NQI0 724 aaKnown RBP16.43■□□□□ 0.22
EIF3F-202ENST00000528653 CNTNAP1P78357 1384 aa16.42■□□□□ 0.22
EIF3F-202ENST00000528653 PRKAB2O43741 272 aa16.42■□□□□ 0.22
EIF3F-202ENST00000528653 TNFAIP1Q13829 316 aa16.42■□□□□ 0.22
EIF3F-202ENST00000528653 MCMDC2Q4G0Z9 681 aa16.42■□□□□ 0.22
EIF3F-202ENST00000528653 FKBP1CQ5VVH2 108 aa16.42■□□□□ 0.22
EIF3F-202ENST00000528653 CHADLQ6NUI6 762 aa16.42■□□□□ 0.22
EIF3F-202ENST00000528653 KRT26Q7Z3Y9 468 aa16.42■□□□□ 0.22
EIF3F-202ENST00000528653 SULF1Q8IWU6 871 aa16.42■□□□□ 0.22
EIF3F-202ENST00000528653 TGFBRAP1Q8WUH2 860 aa16.42■□□□□ 0.22
EIF3F-202ENST00000528653 SDR42E1Q8WUS8 393 aa16.42■□□□□ 0.22
EIF3F-202ENST00000528653 STRBPQ96SI9 672 aaKnown RBP16.42■□□□□ 0.22
EIF3F-202ENST00000528653 IDI2Q9BXS1 227 aa16.42■□□□□ 0.22
EIF3F-202ENST00000528653 IL25Q9H293 177 aa16.42■□□□□ 0.22
EIF3F-202ENST00000528653 FAM198AQ9UFP1 575 aa16.42■□□□□ 0.22
EIF3F-202ENST00000528653 FLT1P17948 1338 aa16.42■□□□□ 0.22
EIF3F-202ENST00000528653 CCDC171Q6TFL3 1326 aa16.42■□□□□ 0.22
EIF3F-202ENST00000528653 RAD50Q92878 1312 aa16.42■□□□□ 0.22
EIF3F-202ENST00000528653 BAZ2AQ9UIF9 1905 aaKnown RBP16.41■□□□□ 0.22
EIF3F-202ENST00000528653 USP5P45974 858 aa16.41■□□□□ 0.22
EIF3F-202ENST00000528653 TNNI2P48788 182 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms