RNA–Protein interactions for RNA: ENST00000524074.1

PFDN1-207, Transcript of prefoldin subunit 1, humanhuman

TSL 5 BASIC

Gene PFDN1, Length 395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-207ENST00000524074 ARNTP27540 789 aa11.93□□□□□ -0.5
PFDN1-207ENST00000524074 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.93□□□□□ -0.5
PFDN1-207ENST00000524074 RUFY4Q6ZNE9 571 aa11.93□□□□□ -0.5
PFDN1-207ENST00000524074 ZSWIM2Q8NEG5 633 aa11.93□□□□□ -0.5
PFDN1-207ENST00000524074 JDP2Q8WYK2 163 aa11.93□□□□□ -0.5
PFDN1-207ENST00000524074 ZNF669Q96BR6 464 aaPredicted RBP11.93□□□□□ -0.5
PFDN1-207ENST00000524074 TRERF1Q96PN7 1200 aa11.93□□□□□ -0.5
PFDN1-207ENST00000524074 A0A1W2PQH9 124 aa11.92□□□□□ -0.5
PFDN1-207ENST00000524074 GRIN3BO60391 1043 aa11.92□□□□□ -0.5
PFDN1-207ENST00000524074 THBS1P07996 1170 aa11.92□□□□□ -0.5
PFDN1-207ENST00000524074 BMP1P13497 986 aa11.92□□□□□ -0.5
PFDN1-207ENST00000524074 CNGA1P29973 690 aa11.92□□□□□ -0.5
PFDN1-207ENST00000524074 DALRD3Q5D0E6 543 aaKnown RBP11.92□□□□□ -0.5
PFDN1-207ENST00000524074 HFE2Q6ZVN8 426 aa11.92□□□□□ -0.5
PFDN1-207ENST00000524074 KRT26Q7Z3Y9 468 aa11.92□□□□□ -0.5
PFDN1-207ENST00000524074 TTC6Q86TZ1 520 aa11.92□□□□□ -0.5
PFDN1-207ENST00000524074 GRIN3AQ8TCU5 1115 aa11.92□□□□□ -0.5
PFDN1-207ENST00000524074 POP1Q99575 1024 aaKnown RBP11.92□□□□□ -0.5
PFDN1-207ENST00000524074 DNMT3LQ9UJW3 386 aa11.92□□□□□ -0.5
PFDN1-207ENST00000524074 POLR3KQ9Y2Y1 108 aaPredicted RBP11.92□□□□□ -0.5
PFDN1-207ENST00000524074 CD2APQ9Y5K6 639 aa11.92□□□□□ -0.5
PFDN1-207ENST00000524074 H7C1W4 665 aa11.91□□□□□ -0.5
PFDN1-207ENST00000524074 ATE1O95260 518 aa11.91□□□□□ -0.5
PFDN1-207ENST00000524074 CD33P20138 364 aa11.91□□□□□ -0.5
PFDN1-207ENST00000524074 LRRFIP1Q32MZ4 808 aaKnown RBP11.91□□□□□ -0.5
PFDN1-207ENST00000524074 ODR4Q5SWX8 454 aa11.91□□□□□ -0.5
PFDN1-207ENST00000524074 CEP135Q66GS9 1140 aa11.91□□□□□ -0.5
PFDN1-207ENST00000524074 TRIM67Q6ZTA4 783 aa11.91□□□□□ -0.5
PFDN1-207ENST00000524074 STK35Q8TDR2 534 aa11.91□□□□□ -0.5
PFDN1-207ENST00000524074 PSMD1Q99460 953 aa11.91□□□□□ -0.5
PFDN1-207ENST00000524074 TM9SF2Q99805 663 aa11.91□□□□□ -0.5
PFDN1-207ENST00000524074 HOMER2Q9NSB8 354 aa11.91□□□□□ -0.5
PFDN1-207ENST00000524074 SLC52A1Q9NWF4 448 aa11.91□□□□□ -0.5
PFDN1-207ENST00000524074 SENP3-EIF4A1A0A087X0R7 540 aa11.9□□□□□ -0.5
PFDN1-207ENST00000524074 BNIP3LO60238 219 aa11.9□□□□□ -0.5
PFDN1-207ENST00000524074 EIF2AK2P19525 551 aaKnown RBP11.9□□□□□ -0.5
PFDN1-207ENST00000524074 PCSK7Q16549 785 aa11.9□□□□□ -0.5
PFDN1-207ENST00000524074 SCARA3Q6AZY7 606 aa11.9□□□□□ -0.5
PFDN1-207ENST00000524074 EEPD1Q7L9B9 569 aa11.9□□□□□ -0.5
PFDN1-207ENST00000524074 DDX54Q8TDD1 881 aaKnown RBP11.9□□□□□ -0.5
PFDN1-207ENST00000524074 A0A0G2JS52 829 aa11.89□□□□□ -0.51
PFDN1-207ENST00000524074 GUCY2CP25092 1073 aa11.89□□□□□ -0.51
PFDN1-207ENST00000524074 UBAP2LQ14157 1087 aaKnown RBP11.89□□□□□ -0.51
PFDN1-207ENST00000524074 ZNF423Q2M1K9 1284 aa11.89□□□□□ -0.51
PFDN1-207ENST00000524074 IGFLR1Q9H665 355 aa11.89□□□□□ -0.51
PFDN1-207ENST00000524074 SLC12A7Q9Y666 1083 aa11.89□□□□□ -0.51
PFDN1-207ENST00000524074 ZBTB42B2RXF5 422 aa11.88□□□□□ -0.51
PFDN1-207ENST00000524074 TBC1D8BQ0IIM8 1120 aa11.88□□□□□ -0.51
PFDN1-207ENST00000524074 TMEM67Q5HYA8 995 aa11.88□□□□□ -0.51
PFDN1-207ENST00000524074 ZSCAN1Q8NBB4 408 aa11.88□□□□□ -0.51
PFDN1-207ENST00000524074 CCDC136Q96JN2 1154 aa11.88□□□□□ -0.51
PFDN1-207ENST00000524074 NDFIP2Q9NV92 336 aa11.88□□□□□ -0.51
PFDN1-207ENST00000524074 PLEKHD1A6NEE1 506 aa11.87□□□□□ -0.51
PFDN1-207ENST00000524074 PTPRAP18433 802 aa11.87□□□□□ -0.51
PFDN1-207ENST00000524074 MRM1Q6IN84 353 aaKnown RBP11.87□□□□□ -0.51
PFDN1-207ENST00000524074 FMNL3Q8IVF7 1028 aa11.87□□□□□ -0.51
PFDN1-207ENST00000524074 MICALL1Q8N3F8 863 aa11.87□□□□□ -0.51
PFDN1-207ENST00000524074 ABHD17AQ96GS6 310 aa11.87□□□□□ -0.51
PFDN1-207ENST00000524074 ZFP42Q96MM3 310 aa11.87□□□□□ -0.51
PFDN1-207ENST00000524074 IER2Q9BTL4 223 aa11.87□□□□□ -0.51
PFDN1-207ENST00000524074 ANTXR1Q9H6X2 564 aa11.87□□□□□ -0.51
PFDN1-207ENST00000524074 FAM177BA6PVY3 158 aa11.86□□□□□ -0.51
PFDN1-207ENST00000524074 MEIS3P2A8K0S8 358 aa11.86□□□□□ -0.51
PFDN1-207ENST00000524074 PTPN11Q06124 597 aaPredicted RBP11.86□□□□□ -0.51
PFDN1-207ENST00000524074 ZNF252P-AS1Q0IIN9 211 aa11.86□□□□□ -0.51
PFDN1-207ENST00000524074 MLECQ14165 292 aa11.86□□□□□ -0.51
PFDN1-207ENST00000524074 C21orf62-AS1Q17RA5 79 aa11.86□□□□□ -0.51
PFDN1-207ENST00000524074 TRIM46Q7Z4K8 759 aa11.86□□□□□ -0.51
PFDN1-207ENST00000524074 DHX37Q8IY37 1157 aaKnown RBP11.86□□□□□ -0.51
PFDN1-207ENST00000524074 CHAC2Q8WUX2 184 aa11.86□□□□□ -0.51
PFDN1-207ENST00000524074 TMEM40Q8WWA1 233 aa11.86□□□□□ -0.51
PFDN1-207ENST00000524074 MFSD3Q96ES6 412 aa11.86□□□□□ -0.51
PFDN1-207ENST00000524074 UBE2OQ9C0C9 1292 aaKnown RBP11.86□□□□□ -0.51
PFDN1-207ENST00000524074 HCN2Q9UL51 889 aa11.86□□□□□ -0.51
PFDN1-207ENST00000524074 SOX13Q9UN79 622 aa11.86□□□□□ -0.51
PFDN1-207ENST00000524074 CCDC194A0A1B0GVG4 234 aa11.85□□□□□ -0.51
PFDN1-207ENST00000524074 MAN1A2O60476 641 aa11.85□□□□□ -0.51
PFDN1-207ENST00000524074 NCAPHQ15003 741 aa11.85□□□□□ -0.51
PFDN1-207ENST00000524074 MAP1SQ66K74 1059 aaPredicted RBP11.85□□□□□ -0.51
PFDN1-207ENST00000524074 HGSNATQ68CP4 663 aa11.85□□□□□ -0.51
PFDN1-207ENST00000524074 VN1R5Q7Z5H4 357 aa11.85□□□□□ -0.51
PFDN1-207ENST00000524074 SPATA9Q9BWV2 254 aa11.85□□□□□ -0.51
PFDN1-207ENST00000524074 DNAJB12Q9NXW2 375 aaKnown RBP11.85□□□□□ -0.51
PFDN1-207ENST00000524074 ATXN7L1Q9ULK2 861 aaPredicted RBP11.85□□□□□ -0.51
PFDN1-207ENST00000524074 RIPOR2Q9Y4F9 1068 aa11.85□□□□□ -0.51
PFDN1-207ENST00000524074 VHLLQ6RSH7 139 aa11.84□□□□□ -0.51
PFDN1-207ENST00000524074 ADAMTSL4Q6UY14 1074 aa11.84□□□□□ -0.51
PFDN1-207ENST00000524074 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.84□□□□□ -0.51
PFDN1-207ENST00000524074 NIM1KQ8IY84 436 aa11.84□□□□□ -0.51
PFDN1-207ENST00000524074 SLC26A8Q96RN1 970 aa11.84□□□□□ -0.51
PFDN1-207ENST00000524074 ATP8A1Q9Y2Q0 1164 aa11.84□□□□□ -0.51
PFDN1-207ENST00000524074 UPK3BL1B0FP48 263 aa11.83□□□□□ -0.52
PFDN1-207ENST00000524074 UPK3BL2E5RIL1 263 aa11.83□□□□□ -0.52
PFDN1-207ENST00000524074 HTR3BO95264 441 aa11.83□□□□□ -0.52
PFDN1-207ENST00000524074 MAP4K4O95819 1239 aaPredicted RBP11.83□□□□□ -0.52
PFDN1-207ENST00000524074 FAM153BP0C7A2 387 aa11.83□□□□□ -0.52
PFDN1-207ENST00000524074 AP3B2Q13367 1082 aa11.83□□□□□ -0.52
PFDN1-207ENST00000524074 LONRF2Q1L5Z9 754 aa11.83□□□□□ -0.52
PFDN1-207ENST00000524074 TM4SF20Q53R12 229 aa11.83□□□□□ -0.52
PFDN1-207ENST00000524074 LRRC47Q8N1G4 583 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms