RNA–Protein interactions for RNA: ENST00000523334.1

HDAC2-215, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 4,810 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-215ENST00000523334 NSUN7Q8NE18 718 aaKnown RBP4.52□□□□□ -1.69
HDAC2-215ENST00000523334 GPT2Q8TD30 523 aa4.52□□□□□ -1.69
HDAC2-215ENST00000523334 ZNF622Q969S3 477 aaKnown RBP eCLIP4.52□□□□□ -1.691e-9■■■□□ 18.7
HDAC2-215ENST00000523334 IL17RAQ96F46 866 aa4.52□□□□□ -1.69
HDAC2-215ENST00000523334 ZKSCAN3Q9BRR0 538 aa4.52□□□□□ -1.69
HDAC2-215ENST00000523334 NOL7Q9UMY1 257 aaKnown RBP4.52□□□□□ -1.69
HDAC2-215ENST00000523334 LEMD3Q9Y2U8 911 aa4.52□□□□□ -1.69
HDAC2-215ENST00000523334 COL18A1P39060 1754 aa4.52□□□□□ -1.69
HDAC2-215ENST00000523334 ROBO1Q9Y6N7 1651 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 FSD2A1L4K1 749 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 ESPNB1AK53 854 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 RAD21O60216 631 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 APBA3O96018 575 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 SERPINB2P05120 415 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 PLCG2P16885 1265 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 KIF5BP33176 963 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 CCAR1Q8IX12 1150 aaKnown RBP4.51□□□□□ -1.69
HDAC2-215ENST00000523334 FAM43AQ8N2R8 423 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 KCNG4Q8TDN1 519 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 SDR42E1Q8WUS8 393 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 LEO1Q8WVC0 666 aaPredicted RBP4.51□□□□□ -1.69
HDAC2-215ENST00000523334 TRIM5Q9C035 493 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 AATFQ9NY61 560 aaKnown RBP eCLIP4.51□□□□□ -1.69
HDAC2-215ENST00000523334 PARP3Q9Y6F1 533 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 STRCQ7RTU9 1775 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 KCPQ6ZWJ8 1503 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 RTL9Q8NET4 1388 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 USP17L12C9JPN9 530 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 USP17L21D6R901 530 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 PRDM1O75626 825 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 PPARAQ07869 468 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 OTUD7BQ6GQQ9 843 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 TTC6Q86TZ1 520 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 GAS2L3Q86XJ1 694 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 NLGN1Q8N2Q7 840 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 LCORLQ8N3X6 602 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 PIBF1Q8WXW3 757 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 XDHP47989 1333 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 PRKAB2O43741 272 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 CALM1P0DP23 149 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 CALM2P0DP24 149 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 CALM3P0DP25 149 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 ADD1P35611 737 aaKnown RBP4.51□□□□□ -1.69
HDAC2-215ENST00000523334 NFIXQ14938 502 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 ALX1Q15699 326 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 SLC4A8Q2Y0W8 1093 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 CEP57L1Q8IYX8 460 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 MYL10Q9BUA6 226 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 KAT14Q9H8E8 782 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 GPHNQ9NQX3 736 aaPredicted RBP4.51□□□□□ -1.69
HDAC2-215ENST00000523334 FAM13BQ9NYF5 915 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 RGL2O15211 777 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 FGFR2P21802 821 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 ATP2B4P23634 1241 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 RBM5P52756 815 aaKnown RBP eCLIP4.51□□□□□ -1.69
HDAC2-215ENST00000523334 GRAPQ13588 217 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 UVSSAQ2YD98 709 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 CCDC178Q5BJE1 867 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 APOA5Q6Q788 366 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 FLAD1Q8NFF5 587 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 GRAPLQ8TC17 118 aaPredicted RBP4.51□□□□□ -1.69
HDAC2-215ENST00000523334 MRPS27Q92552 414 aaKnown RBP4.51□□□□□ -1.69
HDAC2-215ENST00000523334 STX8Q9UNK0 236 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 CEP131Q9UPN4 1083 aa4.51□□□□□ -1.69
HDAC2-215ENST00000523334 CARMIL3Q8ND23 1372 aa4.5□□□□□ -1.69
HDAC2-215ENST00000523334 AK9Q5TCS8 1911 aa4.5□□□□□ -1.69
HDAC2-215ENST00000523334 SPTLC2O15270 562 aa4.5□□□□□ -1.69
HDAC2-215ENST00000523334 MARCH6O60337 910 aa4.5□□□□□ -1.69
HDAC2-215ENST00000523334 BBOX1O75936 387 aa4.5□□□□□ -1.69
HDAC2-215ENST00000523334 EXOSC10Q01780 885 aaKnown RBP4.5□□□□□ -1.69
HDAC2-215ENST00000523334 SLC27A3Q5K4L6 730 aa4.5□□□□□ -1.69
HDAC2-215ENST00000523334 SLC10A5Q5PT55 438 aa4.5□□□□□ -1.69
HDAC2-215ENST00000523334 ZNF772Q68DY9 489 aaPredicted RBP4.5□□□□□ -1.69
HDAC2-215ENST00000523334 RBSNQ9H1K0 784 aa4.5□□□□□ -1.69
HDAC2-215ENST00000523334 ZNF219Q9P2Y4 722 aaPredicted RBP4.5□□□□□ -1.69
HDAC2-215ENST00000523334 USP25Q9UHP3 1055 aa4.5□□□□□ -1.69
HDAC2-215ENST00000523334 RIMBP2O15034 1052 aa4.5□□□□□ -1.69
HDAC2-215ENST00000523334 CAVIN2O95810 425 aa4.5□□□□□ -1.69
HDAC2-215ENST00000523334 ATP2B2Q01814 1243 aa4.5□□□□□ -1.69
HDAC2-215ENST00000523334 PPP2R5BQ15173 497 aa4.5□□□□□ -1.69
HDAC2-215ENST00000523334 OLFM4Q6UX06 510 aa4.5□□□□□ -1.69
HDAC2-215ENST00000523334 CERS3Q8IU89 383 aa4.5□□□□□ -1.69
HDAC2-215ENST00000523334 ZSCAN29Q8IWY8 852 aaPredicted RBP4.5□□□□□ -1.69
HDAC2-215ENST00000523334 MB21D2Q8IYB1 491 aaPredicted RBP4.5□□□□□ -1.69
HDAC2-215ENST00000523334 FBXO18Q8NFZ0 1043 aa4.5□□□□□ -1.69
HDAC2-215ENST00000523334 TBC1D22AQ8WUA7 517 aa4.5□□□□□ -1.69
HDAC2-215ENST00000523334 PHKBQ93100 1093 aa4.5□□□□□ -1.69
HDAC2-215ENST00000523334 FAM84BQ96KN1 310 aaPredicted RBP4.5□□□□□ -1.69
HDAC2-215ENST00000523334 ANO10Q9NW15 660 aa4.5□□□□□ -1.69
HDAC2-215ENST00000523334 PKD1L3Q7Z443 1732 aa4.5□□□□□ -1.69
HDAC2-215ENST00000523334 ZMYM6O95789 1325 aa4.5□□□□□ -1.69
HDAC2-215ENST00000523334 TSPY3P0CV98 308 aa4.5□□□□□ -1.69
HDAC2-215ENST00000523334 TSPY8P0CW00 308 aa4.5□□□□□ -1.69
HDAC2-215ENST00000523334 ZNF165P49910 485 aa4.5□□□□□ -1.69
HDAC2-215ENST00000523334 GNAQP50148 359 aa4.5□□□□□ -1.69
HDAC2-215ENST00000523334 KRT40Q6A162 431 aa4.5□□□□□ -1.69
HDAC2-215ENST00000523334 ZSCAN30Q86W11 494 aa4.5□□□□□ -1.69
HDAC2-215ENST00000523334 TEX11Q8IYF3 940 aa4.5□□□□□ -1.69
HDAC2-215ENST00000523334 ZNF654Q8IZM8 581 aa4.5□□□□□ -1.69
HDAC2-215ENST00000523334 VGLL2Q8N8G2 317 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms