RNA–Protein interactions for RNA: ENST00000522111.2

TRNP1-201, Transcript of TMF1-regulated nuclear protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRNP1, Length 1,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1-201ENST00000522111 CHST3Q7LGC8 479 aa32.3■■■□□ 2.76
TRNP1-201ENST00000522111 RTKN2Q8IZC4 609 aa32.3■■■□□ 2.76
TRNP1-201ENST00000522111 SUPT20HQ8NEM7 779 aa32.3■■■□□ 2.76
TRNP1-201ENST00000522111 LIMCH1Q9UPQ0 1083 aa32.3■■■□□ 2.76
TRNP1-201ENST00000522111 SCN9AQ15858 1988 aa32.3■■■□□ 2.76
TRNP1-201ENST00000522111 SRCAPQ6ZRS2 3230 aa32.3■■■□□ 2.76
TRNP1-201ENST00000522111 MROH7-TTC4A0A0A0MT08 1334 aa32.3■■■□□ 2.76
TRNP1-201ENST00000522111 BRCA1P38398 1863 aaKnown RBP32.29■■■□□ 2.76
TRNP1-201ENST00000522111 CTDSPL2Q05D32 466 aa32.29■■■□□ 2.76
TRNP1-201ENST00000522111 DALRD3Q5D0E6 543 aaKnown RBP32.29■■■□□ 2.76
TRNP1-201ENST00000522111 TMED8Q6PL24 325 aaPredicted RBP32.29■■■□□ 2.76
TRNP1-201ENST00000522111 LARGE1O95461 756 aa32.28■■■□□ 2.76
TRNP1-201ENST00000522111 HMGB1P09429 215 aaKnown RBP32.28■■■□□ 2.76
TRNP1-201ENST00000522111 STK11IPQ8N1F8 1099 aa32.28■■■□□ 2.76
TRNP1-201ENST00000522111 CRNKL1Q9BZJ0 848 aaKnown RBP32.28■■■□□ 2.76
TRNP1-201ENST00000522111 TOB2Q14106 344 aaPredicted RBP32.28■■■□□ 2.76
TRNP1-201ENST00000522111 Q6ZUG5 572 aa32.28■■■□□ 2.76
TRNP1-201ENST00000522111 DHX32Q7L7V1 743 aaKnown RBP32.28■■■□□ 2.76
TRNP1-201ENST00000522111 ZNF277Q9NRM2 450 aaPredicted RBP32.27■■■□□ 2.76
TRNP1-201ENST00000522111 LDHCP07864 332 aa32.27■■■□□ 2.76
TRNP1-201ENST00000522111 FGD1P98174 961 aa32.27■■■□□ 2.76
TRNP1-201ENST00000522111 RALYLQ86SE5 291 aaKnown RBP32.27■■■□□ 2.76
TRNP1-201ENST00000522111 SH3RF3Q8TEJ3 882 aaPredicted RBP32.27■■■□□ 2.76
TRNP1-201ENST00000522111 NOL10Q9BSC4 688 aaKnown RBP32.27■■■□□ 2.76
TRNP1-201ENST00000522111 INCENPQ9NQS7 918 aa32.27■■■□□ 2.76
TRNP1-201ENST00000522111 CD2APQ9Y5K6 639 aa32.27■■■□□ 2.76
TRNP1-201ENST00000522111 MINDY4BA8MYZ0 360 aa32.26■■■□□ 2.75
TRNP1-201ENST00000522111 IGSF3O75054 1194 aa32.26■■■□□ 2.75
TRNP1-201ENST00000522111 TPCN1Q9ULQ1 816 aa32.26■■■□□ 2.75
TRNP1-201ENST00000522111 GRIPAP1Q4V328 841 aa32.25■■■□□ 2.75
TRNP1-201ENST00000522111 NCOA7Q8NI08 942 aa32.25■■■□□ 2.75
TRNP1-201ENST00000522111 PSMD1Q99460 953 aa32.25■■■□□ 2.75
TRNP1-201ENST00000522111 TTF2Q9UNY4 1162 aaKnown RBP32.25■■■□□ 2.75
TRNP1-201ENST00000522111 BAG3O95817 575 aa32.25■■■□□ 2.75
TRNP1-201ENST00000522111 BTDP43251 543 aa32.25■■■□□ 2.75
TRNP1-201ENST00000522111 NEDD4P46934 1319 aa32.24■■■□□ 2.75
TRNP1-201ENST00000522111 CYP2D7A0A087X1C5 515 aa32.24■■■□□ 2.75
TRNP1-201ENST00000522111 SMIM22K7EJ46 135 aa32.24■■■□□ 2.75
TRNP1-201ENST00000522111 ANKRD1Q15327 319 aa32.24■■■□□ 2.75
TRNP1-201ENST00000522111 TRDNQ13061 729 aa32.23■■■□□ 2.75
TRNP1-201ENST00000522111 CUL4AQ13619 759 aa32.23■■■□□ 2.75
TRNP1-201ENST00000522111 ILDR2Q71H61 639 aa32.23■■■□□ 2.75
TRNP1-201ENST00000522111 NKX2-3Q8TAU0 364 aa32.23■■■□□ 2.75
TRNP1-201ENST00000522111 DCP1AQ9NPI6 582 aaPredicted RBP32.23■■■□□ 2.75
TRNP1-201ENST00000522111 DDIT3P35638 169 aa32.23■■■□□ 2.75
TRNP1-201ENST00000522111 SCNN1DP51172 638 aa32.23■■■□□ 2.75
TRNP1-201ENST00000522111 EXOSC10Q01780 885 aaKnown RBP32.23■■■□□ 2.75
TRNP1-201ENST00000522111 PPARAQ07869 468 aa32.23■■■□□ 2.75
TRNP1-201ENST00000522111 ME3Q16798 604 aa32.22■■■□□ 2.75
TRNP1-201ENST00000522111 SOGA3Q5TF21 947 aa32.22■■■□□ 2.75
TRNP1-201ENST00000522111 SLF2Q8IX21 1173 aa32.22■■■□□ 2.75
TRNP1-201ENST00000522111 MB21D2Q8IYB1 491 aaPredicted RBP32.22■■■□□ 2.75
TRNP1-201ENST00000522111 BRF1Q92994 677 aa32.22■■■□□ 2.75
TRNP1-201ENST00000522111 ALDH8A1Q9H2A2 487 aaPredicted RBP32.22■■■□□ 2.75
TRNP1-201ENST00000522111 BCS1LQ9Y276 419 aa32.22■■■□□ 2.75
TRNP1-201ENST00000522111 TIAM2Q8IVF5 1701 aa32.22■■■□□ 2.75
TRNP1-201ENST00000522111 ADAMTSL1Q8N6G6 1762 aa32.21■■■□□ 2.75
TRNP1-201ENST00000522111 SLC4A8Q2Y0W8 1093 aa32.21■■■□□ 2.75
TRNP1-201ENST00000522111 STRIP1Q5VSL9 837 aa32.21■■■□□ 2.75
TRNP1-201ENST00000522111 LARGE2Q8N3Y3 721 aa32.21■■■□□ 2.75
TRNP1-201ENST00000522111 NLGN2Q8NFZ4 835 aa32.21■■■□□ 2.75
TRNP1-201ENST00000522111 SUGT1Q9Y2Z0 365 aa32.21■■■□□ 2.75
TRNP1-201ENST00000522111 TACC3Q9Y6A5 838 aa32.21■■■□□ 2.75
TRNP1-201ENST00000522111 B4E1Z4 1266 aa32.21■■■□□ 2.75
TRNP1-201ENST00000522111 USP5P45974 858 aa32.21■■■□□ 2.75
TRNP1-201ENST00000522111 DAGLAQ9Y4D2 1042 aa32.21■■■□□ 2.75
TRNP1-201ENST00000522111 ZNF646O15015 1829 aaPredicted RBP32.21■■■□□ 2.75
TRNP1-201ENST00000522111 COL4A5P29400 1685 aa32.2■■■□□ 2.75
TRNP1-201ENST00000522111 USP17L3A6NCW0 530 aa32.2■■■□□ 2.75
TRNP1-201ENST00000522111 USP17L4A6NCW7 530 aa32.2■■■□□ 2.75
TRNP1-201ENST00000522111 YDJCA8MPS7 323 aa32.2■■■□□ 2.75
TRNP1-201ENST00000522111 USP17L12C9JPN9 530 aa32.2■■■□□ 2.75
TRNP1-201ENST00000522111 USP17L21D6R901 530 aa32.2■■■□□ 2.75
TRNP1-201ENST00000522111 DACT2Q5SW24 774 aa32.2■■■□□ 2.75
TRNP1-201ENST00000522111 USP17L1Q7RTZ2 530 aa32.2■■■□□ 2.75
TRNP1-201ENST00000522111 KIAA0825Q8IV33 1275 aa32.2■■■□□ 2.75
TRNP1-201ENST00000522111 TOMM22Q9NS69 142 aa32.2■■■□□ 2.75
TRNP1-201ENST00000522111 ATP8A2Q9NTI2 1148 aa32.2■■■□□ 2.75
TRNP1-201ENST00000522111 GAKO14976 1311 aa32.2■■■□□ 2.74
TRNP1-201ENST00000522111 GPR75-ASB3A0A0A6YYF3 556 aa32.19■■■□□ 2.74
TRNP1-201ENST00000522111 PRC1O43663 620 aa32.19■■■□□ 2.74
TRNP1-201ENST00000522111 MCM5P33992 734 aa32.19■■■□□ 2.74
TRNP1-201ENST00000522111 PPP4CP60510 307 aa32.19■■■□□ 2.74
TRNP1-201ENST00000522111 EVX2Q03828 476 aa32.19■■■□□ 2.74
TRNP1-201ENST00000522111 AKNAD1Q5T1N1 836 aa32.19■■■□□ 2.74
TRNP1-201ENST00000522111 CTR9Q6PD62 1173 aa32.19■■■□□ 2.74
TRNP1-201ENST00000522111 CCDC83Q8IWF9 413 aa32.19■■■□□ 2.74
TRNP1-201ENST00000522111 NECAB1Q8N987 351 aa32.19■■■□□ 2.74
TRNP1-201ENST00000522111 CHMP5Q9NZZ3 219 aa32.19■■■□□ 2.74
TRNP1-201ENST00000522111 ANTXR2P58335 489 aa32.19■■■□□ 2.74
TRNP1-201ENST00000522111 STK3Q13188 491 aa32.19■■■□□ 2.74
TRNP1-201ENST00000522111 RRP12Q5JTH9 1297 aaKnown RBP32.19■■■□□ 2.74
TRNP1-201ENST00000522111 GIMAP6Q6P9H5 292 aa32.19■■■□□ 2.74
TRNP1-201ENST00000522111 MFSD6Q6ZSS7 791 aa32.19■■■□□ 2.74
TRNP1-201ENST00000522111 GPHNQ9NQX3 736 aaPredicted RBP32.19■■■□□ 2.74
TRNP1-201ENST00000522111 TGFBRAP1Q8WUH2 860 aa32.18■■■□□ 2.74
TRNP1-201ENST00000522111 ZSCAN31Q96LW9 406 aaPredicted RBP32.18■■■□□ 2.74
TRNP1-201ENST00000522111 SPON1Q9HCB6 807 aa32.18■■■□□ 2.74
TRNP1-201ENST00000522111 CDK5RAP2Q96SN8 1893 aa32.18■■■□□ 2.74
TRNP1-201ENST00000522111 DTNBO60941 627 aa32.18■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms