RNA–Protein interactions for RNA: ENST00000517940.1

AP3B1-203, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 2

Gene AP3B1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-203ENST00000517940 UBE3CQ15386 1083 aa14.33□□□□□ -0.12
AP3B1-203ENST00000517940 SPDYE2Q495Y8 402 aa14.33□□□□□ -0.12
AP3B1-203ENST00000517940 USP50Q70EL3 339 aaPredicted RBP14.33□□□□□ -0.12
AP3B1-203ENST00000517940 OGFOD1Q8N543 542 aa14.33□□□□□ -0.12
AP3B1-203ENST00000517940 FAM227BQ96M60 508 aa14.33□□□□□ -0.12
AP3B1-203ENST00000517940 SEC62Q99442 399 aaKnown RBP14.33□□□□□ -0.12
AP3B1-203ENST00000517940 TDRD3Q9H7E2 651 aaKnown RBP14.33□□□□□ -0.12
AP3B1-203ENST00000517940 GPBP1L1Q9HC44 474 aaPredicted RBP14.33□□□□□ -0.12
AP3B1-203ENST00000517940 DDX4Q9NQI0 724 aaKnown RBP14.33□□□□□ -0.12
AP3B1-203ENST00000517940 GGA3Q9NZ52 723 aa14.33□□□□□ -0.12
AP3B1-203ENST00000517940 PAPPA2Q9BXP8 1791 aa14.32□□□□□ -0.12
AP3B1-203ENST00000517940 NAV1Q8NEY1 1877 aa14.32□□□□□ -0.12
AP3B1-203ENST00000517940 SSC5DA1L4H1 1573 aa14.32□□□□□ -0.12
AP3B1-203ENST00000517940 A0A0D9SFI3 127 aa14.32□□□□□ -0.12
AP3B1-203ENST00000517940 CLRN2A0PK11 232 aa14.32□□□□□ -0.12
AP3B1-203ENST00000517940 IGSF3O75054 1194 aa14.32□□□□□ -0.12
AP3B1-203ENST00000517940 WDHD1O75717 1129 aaPredicted RBP14.32□□□□□ -0.12
AP3B1-203ENST00000517940 MMP14P50281 582 aa14.32□□□□□ -0.12
AP3B1-203ENST00000517940 PPP4CP60510 307 aa14.32□□□□□ -0.12
AP3B1-203ENST00000517940 DLGAP5Q15398 846 aa14.32□□□□□ -0.12
AP3B1-203ENST00000517940 BMP2KLQ5H9B9 411 aa14.32□□□□□ -0.12
AP3B1-203ENST00000517940 ZMYM1Q5SVZ6 1142 aa14.32□□□□□ -0.12
AP3B1-203ENST00000517940 CDAN1Q8IWY9 1227 aa14.32□□□□□ -0.12
AP3B1-203ENST00000517940 LCORLQ8N3X6 602 aa14.32□□□□□ -0.12
AP3B1-203ENST00000517940 MIGA1Q8NAN2 632 aa14.32□□□□□ -0.12
AP3B1-203ENST00000517940 FSD1Q9BTV5 496 aa14.32□□□□□ -0.12
AP3B1-203ENST00000517940 ZNF70Q9UC06 446 aaPredicted RBP14.32□□□□□ -0.12
AP3B1-203ENST00000517940 HDAC9Q9UKV0 1011 aa14.32□□□□□ -0.12
AP3B1-203ENST00000517940 BAZ2AQ9UIF9 1905 aaKnown RBP14.32□□□□□ -0.12
AP3B1-203ENST00000517940 TRIM6-TRIM34B2RNG4 842 aa14.31□□□□□ -0.12
AP3B1-203ENST00000517940 RNF113AO15541 343 aaKnown RBP14.31□□□□□ -0.12
AP3B1-203ENST00000517940 FMR1Q06787 632 aaKnown RBP eCLIP14.31□□□□□ -0.12
AP3B1-203ENST00000517940 EAPPQ56P03 285 aaPredicted RBP14.31□□□□□ -0.12
AP3B1-203ENST00000517940 ANGEL2Q5VTE6 544 aaKnown RBP14.31□□□□□ -0.12
AP3B1-203ENST00000517940 SH3RF3Q8TEJ3 882 aaPredicted RBP14.31□□□□□ -0.12
AP3B1-203ENST00000517940 RILPL2Q969X0 211 aa14.31□□□□□ -0.12
AP3B1-203ENST00000517940 AATFQ9NY61 560 aaKnown RBP eCLIP14.31□□□□□ -0.12
AP3B1-203ENST00000517940 FAM198AQ9UFP1 575 aa14.31□□□□□ -0.12
AP3B1-203ENST00000517940 NMIQ13287 307 aaPredicted RBP14.3□□□□□ -0.12
AP3B1-203ENST00000517940 CCDC129Q6ZRS4 1044 aa14.3□□□□□ -0.12
AP3B1-203ENST00000517940 ZNF589Q86UQ0 364 aaPredicted RBP14.3□□□□□ -0.12
AP3B1-203ENST00000517940 ZFPM1Q8IX07 1006 aa14.3□□□□□ -0.12
AP3B1-203ENST00000517940 CNTROBQ8N137 903 aa14.3□□□□□ -0.12
AP3B1-203ENST00000517940 APPBP2Q92624 585 aa14.3□□□□□ -0.12
AP3B1-203ENST00000517940 MKRN1Q9UHC7 482 aaKnown RBP14.3□□□□□ -0.12
AP3B1-203ENST00000517940 MYH1P12882 1939 aa14.29□□□□□ -0.12
AP3B1-203ENST00000517940 ADM5C9JUS6 153 aa14.29□□□□□ -0.12
AP3B1-203ENST00000517940 PRKAB2O43741 272 aa14.29□□□□□ -0.12
AP3B1-203ENST00000517940 MBD4O95243 580 aa14.29□□□□□ -0.12
AP3B1-203ENST00000517940 CHMLP26374 656 aa14.29□□□□□ -0.12
AP3B1-203ENST00000517940 RBM5P52756 815 aaKnown RBP eCLIP14.29□□□□□ -0.12
AP3B1-203ENST00000517940 GSTO1P78417 241 aa14.29□□□□□ -0.12
AP3B1-203ENST00000517940 EVX2Q03828 476 aa14.29□□□□□ -0.12
AP3B1-203ENST00000517940 MAP1SQ66K74 1059 aaPredicted RBP14.29□□□□□ -0.12
AP3B1-203ENST00000517940 SH3BP5LQ7L8J4 393 aa14.29□□□□□ -0.12
AP3B1-203ENST00000517940 PNMA8AQ86V59 439 aaPredicted RBP14.29□□□□□ -0.12
AP3B1-203ENST00000517940 LDHDQ86WU2 507 aa14.29□□□□□ -0.12
AP3B1-203ENST00000517940 ARMT1Q9H993 441 aa14.29□□□□□ -0.12
AP3B1-203ENST00000517940 PITPNM2Q9BZ72 1349 aa14.29□□□□□ -0.12
AP3B1-203ENST00000517940 ATRNL1Q5VV63 1379 aa14.29□□□□□ -0.12
AP3B1-203ENST00000517940 SMIM22K7EJ46 135 aa14.28□□□□□ -0.12
AP3B1-203ENST00000517940 ITGBL1O95965 494 aaPredicted RBP14.28□□□□□ -0.12
AP3B1-203ENST00000517940 LDHCP07864 332 aa14.28□□□□□ -0.12
AP3B1-203ENST00000517940 LAMB1P07942 1786 aa14.28□□□□□ -0.12
AP3B1-203ENST00000517940 SLURP2P0DP57 97 aa14.28□□□□□ -0.12
AP3B1-203ENST00000517940 TMED8Q6PL24 325 aaPredicted RBP14.28□□□□□ -0.12
AP3B1-203ENST00000517940 ZC3H15Q8WU90 426 aaKnown RBP14.28□□□□□ -0.12
AP3B1-203ENST00000517940 TEPSINQ96N21 525 aa14.28□□□□□ -0.12
AP3B1-203ENST00000517940 STRBPQ96SI9 672 aaKnown RBP14.28□□□□□ -0.12
AP3B1-203ENST00000517940 IDI2Q9BXS1 227 aa14.28□□□□□ -0.12
AP3B1-203ENST00000517940 GLIS2Q9BZE0 524 aaPredicted RBP14.28□□□□□ -0.12
AP3B1-203ENST00000517940 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.28□□□□□ -0.127e-7■■□□□ 14
AP3B1-203ENST00000517940 EPB41L4AQ9HCS5 686 aaPredicted RBP14.28□□□□□ -0.12
AP3B1-203ENST00000517940 USP40Q9NVE5 1235 aa14.28□□□□□ -0.12
AP3B1-203ENST00000517940 TRPM7Q96QT4 1865 aa14.27□□□□□ -0.12
AP3B1-203ENST00000517940 RPAP1Q9BWH6 1393 aaPredicted RBP14.27□□□□□ -0.12
AP3B1-203ENST00000517940 FLT1P17948 1338 aa14.27□□□□□ -0.12
AP3B1-203ENST00000517940 MAGEB6P1A0A0J9YX57 407 aa14.27□□□□□ -0.13
AP3B1-203ENST00000517940 TRAF5O00463 557 aa14.27□□□□□ -0.13
AP3B1-203ENST00000517940 GPAA1O43292 621 aa14.27□□□□□ -0.13
AP3B1-203ENST00000517940 ZFYP08048 801 aaPredicted RBP14.27□□□□□ -0.13
AP3B1-203ENST00000517940 VPS53Q5VIR6 699 aa14.27□□□□□ -0.13
AP3B1-203ENST00000517940 PRAMEF18Q5VWM3 479 aa14.27□□□□□ -0.13
AP3B1-203ENST00000517940 SLF2Q8IX21 1173 aa14.27□□□□□ -0.13
AP3B1-203ENST00000517940 OTOFQ9HC10 1997 aa14.27□□□□□ -0.13
AP3B1-203ENST00000517940 COL2A1P02458 1487 aaPredicted RBP14.26□□□□□ -0.13
AP3B1-203ENST00000517940 TCP10L2B9ZVM9 353 aa14.26□□□□□ -0.13
AP3B1-203ENST00000517940 FKBP1CQ5VVH2 108 aa14.26□□□□□ -0.13
AP3B1-203ENST00000517940 ZSCAN25Q6NSZ9 544 aa14.26□□□□□ -0.13
AP3B1-203ENST00000517940 TICAM2Q86XR7 235 aa14.26□□□□□ -0.13
AP3B1-203ENST00000517940 SDR42E1Q8WUS8 393 aa14.26□□□□□ -0.13
AP3B1-203ENST00000517940 TMEM39BQ9GZU3 492 aa14.26□□□□□ -0.13
AP3B1-203ENST00000517940 VEZTQ9HBM0 779 aa14.26□□□□□ -0.13
AP3B1-203ENST00000517940 LAMA4Q16363 1823 aa14.25□□□□□ -0.13
AP3B1-203ENST00000517940 PASKQ96RG2 1323 aa14.25□□□□□ -0.13
AP3B1-203ENST00000517940 GSG1L2A8MUP6 293 aa14.25□□□□□ -0.13
AP3B1-203ENST00000517940 RASA3Q14644 834 aa14.25□□□□□ -0.13
AP3B1-203ENST00000517940 CHADLQ6NUI6 762 aa14.25□□□□□ -0.13
AP3B1-203ENST00000517940 USP48Q86UV5 1035 aa14.25□□□□□ -0.13
AP3B1-203ENST00000517940 TEX11Q8IYF3 940 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 713.5 ms