RNA–Protein interactions for RNA: ENST00000516309.1

RNU6ATAC39P-201, Transcript of RNA, U6atac small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6ATAC39P, Length 149 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC39P-201ENST00000516309 SLC26A8Q96RN1 970 aa8.33□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 CAMKK2Q96RR4 588 aa8.33□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.33□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 TRAK1Q9UPV9 953 aa8.33□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 CBFA2T2O43439 604 aa8.32□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 TRIM27P14373 513 aa8.32□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 MCM4P33991 863 aa8.32□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 GEMIN4P57678 1058 aaKnown RBP8.32□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 CAMK2GQ13555 558 aaPredicted RBP8.32□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 HYIQ5T013 277 aa8.32□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 SH3PXD2AQ5TCZ1 1133 aa8.32□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 KANK3Q6NY19 840 aa8.32□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 NECAB2Q7Z6G3 386 aa8.32□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 ZBTB46Q86UZ6 589 aa8.32□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 GALNT12Q8IXK2 581 aa8.32□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 AFAP1L2Q8N4X5 818 aa8.32□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 C3orf58Q8NDZ4 430 aa8.32□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 MTMR8Q96EF0 704 aa8.32□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 GPR101Q96P66 508 aaPredicted RBP8.32□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 PHACTR1Q9C0D0 580 aa8.32□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 CLIC5Q9NZA1 410 aa8.32□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 PUF60Q9UHX1 559 aaKnown RBP8.32□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 TLR6Q9Y2C9 796 aa8.32□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 ROBO2Q9HCK4 1378 aa8.32□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 RFPL3O75679 317 aa8.31□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 RAPGEF3O95398 923 aa8.31□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 LIG3P49916 1009 aa8.31□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 ITKQ08881 620 aa8.31□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 TLR1Q15399 786 aa8.31□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 CDC37Q16543 378 aaPredicted RBP8.31□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 ALDH1L2Q3SY69 923 aa8.31□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 ZC3H12BQ5HYM0 836 aaKnown RBP8.31□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 PDE12Q6L8Q7 609 aaKnown RBP8.31□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 FAM196AQ6ZSG2 479 aa8.31□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 NBPF11Q86T75 865 aa8.31□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 ZSCAN30Q86W11 494 aa8.31□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 SUGP1Q8IWZ8 645 aaKnown RBP8.31□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 FTSJ3Q8IY81 847 aaKnown RBP8.31□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 MAGEB6Q8N7X4 407 aa8.31□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 HOOK2Q96ED9 719 aa8.31□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 SCLT1Q96NL6 688 aa8.31□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 TNKS2Q9H2K2 1166 aa8.31□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 ZNF180Q9UJW8 692 aa8.31□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 USP3Q9Y6I4 520 aa8.31□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 GSG1L2A8MUP6 293 aa8.3□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 MICAL2O94851 1124 aa8.3□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 DDIT3P35638 169 aa8.3□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 HALP42357 657 aa8.3□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 SARSP49591 514 aaKnown RBP8.3□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 PUM3Q15397 648 aaKnown RBP8.3□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 PPP2R5EQ16537 467 aa8.3□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 LONRF2Q1L5Z9 754 aa8.3□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 IL31Q6EBC2 164 aa8.3□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 MMS22LQ6ZRQ5 1243 aa8.3□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 VASH1Q7L8A9 365 aaPredicted RBP8.3□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 ANKRD23Q86SG2 305 aa8.3□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 MORC1Q86VD1 984 aa8.3□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 ANKRD24Q8TF21 1146 aa8.3□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 L3MBTL2Q969R5 705 aa8.3□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 SKA1Q96BD8 255 aa8.3□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 CHMP4CQ96CF2 233 aa8.3□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 MPP4Q96JB8 637 aa8.3□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 LRRC27Q9C0I9 530 aa8.3□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 STRN4Q9NRL3 753 aa8.3□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 SLC5A4Q9NY91 659 aa8.3□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 CABP1Q9NZU7 370 aa8.3□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 EVLQ9UI08 416 aaPredicted RBP8.3□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 HDAC9Q9UKV0 1011 aa8.3□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 FAM153BP0C7A2 387 aa8.29□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 RBP3P10745 1247 aa8.29□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 ZNF165P49910 485 aa8.29□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 CASP7P55210 303 aa8.29□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 FCGRTP55899 365 aa8.29□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 MTMR1Q13613 665 aa8.29□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 LONRF1Q17RB8 773 aa8.29□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 GLIPR1L2Q4G1C9 344 aa8.29□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 DDX46Q7L014 1031 aaKnown RBP8.29□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 ZNF622Q969S3 477 aaKnown RBP eCLIP8.29□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 RTFDC1Q9BY42 306 aaPredicted RBP8.29□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 RASSF10A6NK89 507 aa8.28□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 TLR3O15455 904 aaKnown RBP8.28□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 FIBPO43427 364 aa8.28□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 SRGNP10124 158 aa8.28□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 IMPDH2P12268 514 aa8.28□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 RRM1P23921 792 aa8.28□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 NEK3P51956 506 aa8.28□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 MSL3Q8N5Y2 521 aaKnown RBP8.28□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 PJA1Q8NG27 643 aa8.28□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 ZDHHC1Q8WTX9 485 aa8.28□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 RUSC1Q9BVN2 902 aa8.28□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 CSRNP2Q9H175 543 aa8.28□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 EHD4Q9H223 541 aa8.28□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 RETREG1Q9H6L5 497 aa8.28□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 LGR6Q9HBX8 967 aa8.28□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 RAB6BQ9NRW1 208 aa8.28□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 CWC25Q9NXE8 425 aaPredicted RBP8.28□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 OBP2AQ9NY56 170 aa8.28□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 C9orf78Q9NZ63 289 aaPredicted RBP8.28□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 FEZ2Q9UHY8 353 aaPredicted RBP8.28□□□□□ -1.08
RNU6ATAC39P-201ENST00000516309 MAP4K5Q9Y4K4 846 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms