RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 PDZD3Q86UT5 571 aa8.62□□□□□ -1.03
UBE2D3-225ENST00000508476 SULF2Q8IWU5 870 aa8.62□□□□□ -1.03
UBE2D3-225ENST00000508476 FBXL6Q8N531 539 aa8.62□□□□□ -1.03
UBE2D3-225ENST00000508476 ANKRD33BA6NCL7 494 aa8.61□□□□□ -1.03
UBE2D3-225ENST00000508476 WDR64B1ANS9 1081 aa8.61□□□□□ -1.03
UBE2D3-225ENST00000508476 PPP2R3AQ06190 1150 aa8.61□□□□□ -1.03
UBE2D3-225ENST00000508476 HP1BP3Q5SSJ5 553 aaPredicted RBP8.61□□□□□ -1.03
UBE2D3-225ENST00000508476 ZFYVE1Q9HBF4 777 aa8.61□□□□□ -1.03
UBE2D3-225ENST00000508476 PAGE1O75459 146 aa8.6□□□□□ -1.03
UBE2D3-225ENST00000508476 NFICP08651 508 aa8.6□□□□□ -1.03
UBE2D3-225ENST00000508476 GSTT1P30711 240 aa8.6□□□□□ -1.03
UBE2D3-225ENST00000508476 ADMP35318 185 aa8.6□□□□□ -1.03
UBE2D3-225ENST00000508476 MPRIPQ6WCQ1 1025 aa8.6□□□□□ -1.03
UBE2D3-225ENST00000508476 EZH1Q92800 747 aaPredicted RBP8.6□□□□□ -1.03
UBE2D3-225ENST00000508476 KCNB2Q92953 911 aa8.6□□□□□ -1.03
UBE2D3-225ENST00000508476 NECAB3Q96P71 396 aaPredicted RBP8.6□□□□□ -1.03
UBE2D3-225ENST00000508476 SEMA6CQ9H3T2 930 aa8.6□□□□□ -1.03
UBE2D3-225ENST00000508476 ENC1O14682 589 aa8.59□□□□□ -1.03
UBE2D3-225ENST00000508476 TMPRSS2O15393 492 aa8.59□□□□□ -1.03
UBE2D3-225ENST00000508476 DYNC1LI2O43237 492 aaPredicted RBP8.59□□□□□ -1.03
UBE2D3-225ENST00000508476 F13BP05160 661 aa8.59□□□□□ -1.03
UBE2D3-225ENST00000508476 ASPAP45381 313 aa8.59□□□□□ -1.03
UBE2D3-225ENST00000508476 CD97P48960 835 aa8.59□□□□□ -1.03
UBE2D3-225ENST00000508476 PAOXQ6QHF9 649 aa8.59□□□□□ -1.03
UBE2D3-225ENST00000508476 GSX1Q9H4S2 264 aaPredicted RBP8.59□□□□□ -1.03
UBE2D3-225ENST00000508476 ACSS3Q9H6R3 686 aa8.59□□□□□ -1.03
UBE2D3-225ENST00000508476 C12orf49Q9H741 205 aa8.59□□□□□ -1.03
UBE2D3-225ENST00000508476 PRKAG2Q9UGJ0 569 aa8.59□□□□□ -1.03
UBE2D3-225ENST00000508476 USP17L7P0C7H9 530 aa8.58□□□□□ -1.04
UBE2D3-225ENST00000508476 ARNTP27540 789 aa8.58□□□□□ -1.04
UBE2D3-225ENST00000508476 RASIP1Q5U651 963 aa8.58□□□□□ -1.04
UBE2D3-225ENST00000508476 SRCIN1Q9C0H9 1055 aa8.58□□□□□ -1.04
UBE2D3-225ENST00000508476 LGR6Q9HBX8 967 aa8.58□□□□□ -1.04
UBE2D3-225ENST00000508476 SPG7Q9UQ90 795 aa8.58□□□□□ -1.04
UBE2D3-225ENST00000508476 PCDHGC5Q9Y5F6 944 aa8.58□□□□□ -1.04
UBE2D3-225ENST00000508476 NME2P22392 152 aa8.57□□□□□ -1.04
UBE2D3-225ENST00000508476 HOXA10P31260 410 aaPredicted RBP8.57□□□□□ -1.04
UBE2D3-225ENST00000508476 KIF4BQ2VIQ3 1234 aa8.57□□□□□ -1.04
UBE2D3-225ENST00000508476 MAP1SQ66K74 1059 aaPredicted RBP8.57□□□□□ -1.04
UBE2D3-225ENST00000508476 DNAJC14Q6Y2X3 702 aaPredicted RBP8.57□□□□□ -1.04
UBE2D3-225ENST00000508476 GRIN3AQ8TCU5 1115 aa8.57□□□□□ -1.04
UBE2D3-225ENST00000508476 GATA6Q92908 595 aa8.57□□□□□ -1.04
UBE2D3-225ENST00000508476 PCMTD2Q9NV79 361 aa8.57□□□□□ -1.04
UBE2D3-225ENST00000508476 CRIM1Q9NZV1 1036 aa8.57□□□□□ -1.04
UBE2D3-225ENST00000508476 GIPC1O14908 333 aa8.56□□□□□ -1.04
UBE2D3-225ENST00000508476 CELA3AP09093 270 aa8.56□□□□□ -1.04
UBE2D3-225ENST00000508476 ZNF252P-AS1Q0IIN9 211 aa8.56□□□□□ -1.04
UBE2D3-225ENST00000508476 TBC1D32Q96NH3 1257 aa8.56□□□□□ -1.04
UBE2D3-225ENST00000508476 FANCD2OSQ96PS1 177 aa8.56□□□□□ -1.04
UBE2D3-225ENST00000508476 DUSP9Q99956 384 aaKnown RBP8.56□□□□□ -1.04
UBE2D3-225ENST00000508476 YIPF2Q9BWQ6 316 aa8.56□□□□□ -1.04
UBE2D3-225ENST00000508476 CBX8Q9HC52 389 aa8.56□□□□□ -1.04
UBE2D3-225ENST00000508476 KRT82Q9NSB4 513 aa8.56□□□□□ -1.04
UBE2D3-225ENST00000508476 DAGLAQ9Y4D2 1042 aa8.56□□□□□ -1.04
UBE2D3-225ENST00000508476 SYNGAP1Q96PV0 1343 aa8.55□□□□□ -1.04
UBE2D3-225ENST00000508476 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.55□□□□□ -1.04
UBE2D3-225ENST00000508476 FAM170BA6NMN3 283 aa8.55□□□□□ -1.04
UBE2D3-225ENST00000508476 COBLO75128 1261 aa8.55□□□□□ -1.04
UBE2D3-225ENST00000508476 PRPF40AO75400 957 aaKnown RBP8.55□□□□□ -1.04
UBE2D3-225ENST00000508476 BMP6P22004 513 aa8.55□□□□□ -1.04
UBE2D3-225ENST00000508476 ID3Q02535 119 aa8.55□□□□□ -1.04
UBE2D3-225ENST00000508476 NBPF11Q86T75 865 aa8.55□□□□□ -1.04
UBE2D3-225ENST00000508476 NPAS4Q8IUM7 802 aa8.55□□□□□ -1.04
UBE2D3-225ENST00000508476 GPBAR1Q8TDU6 330 aa8.55□□□□□ -1.04
UBE2D3-225ENST00000508476 DISC1Q9NRI5 854 aa8.55□□□□□ -1.04
UBE2D3-225ENST00000508476 FAM8A1Q9UBU6 413 aa8.55□□□□□ -1.04
UBE2D3-225ENST00000508476 PPM1HQ9ULR3 514 aa8.55□□□□□ -1.04
UBE2D3-225ENST00000508476 ADAMTS4O75173 837 aa8.54□□□□□ -1.04
UBE2D3-225ENST00000508476 SLFN14P0C7P3 912 aa8.54□□□□□ -1.04
UBE2D3-225ENST00000508476 GNA15P30679 374 aa8.54□□□□□ -1.04
UBE2D3-225ENST00000508476 EAPPQ56P03 285 aaPredicted RBP8.54□□□□□ -1.04
UBE2D3-225ENST00000508476 SEZ6L2Q6UXD5 910 aa8.54□□□□□ -1.04
UBE2D3-225ENST00000508476 ZAR1Q86SH2 424 aa8.54□□□□□ -1.04
UBE2D3-225ENST00000508476 C1GALT1Q9NS00 363 aa8.54□□□□□ -1.04
UBE2D3-225ENST00000508476 KIAA1324LA8MWY0 1029 aaPredicted RBP8.53□□□□□ -1.04
UBE2D3-225ENST00000508476 MAP7Q14244 749 aa8.53□□□□□ -1.04
UBE2D3-225ENST00000508476 OSBPL1AQ9BXW6 950 aa8.53□□□□□ -1.04
UBE2D3-225ENST00000508476 CEP44Q9C0F1 390 aa8.53□□□□□ -1.04
UBE2D3-225ENST00000508476 GZF1Q9H116 711 aaPredicted RBP8.53□□□□□ -1.04
UBE2D3-225ENST00000508476 ATG3Q9NT62 314 aa8.53□□□□□ -1.04
UBE2D3-225ENST00000508476 HCLS1P14317 486 aaPredicted RBP8.52□□□□□ -1.05
UBE2D3-225ENST00000508476 SPINK2P20155 84 aa8.52□□□□□ -1.05
UBE2D3-225ENST00000508476 TTLL4Q14679 1199 aa8.52□□□□□ -1.05
UBE2D3-225ENST00000508476 EMILIN2Q9BXX0 1053 aa8.52□□□□□ -1.05
UBE2D3-225ENST00000508476 CACNA2D2Q9NY47 1150 aa8.52□□□□□ -1.05
UBE2D3-225ENST00000508476 PIM2Q9P1W9 311 aa8.52□□□□□ -1.05
UBE2D3-225ENST00000508476 TTF2Q9UNY4 1162 aaKnown RBP8.52□□□□□ -1.05
UBE2D3-225ENST00000508476 NEFMP07197 916 aa8.51□□□□□ -1.05
UBE2D3-225ENST00000508476 EIF4BP23588 611 aaKnown RBP8.51□□□□□ -1.05
UBE2D3-225ENST00000508476 TAGLNQ01995 201 aaKnown RBP8.51□□□□□ -1.05
UBE2D3-225ENST00000508476 COL19A1Q14993 1142 aa8.51□□□□□ -1.05
UBE2D3-225ENST00000508476 ZC3H12AQ5D1E8 599 aaKnown RBP8.51□□□□□ -1.05
UBE2D3-225ENST00000508476 ANKRD24Q8TF21 1146 aa8.51□□□□□ -1.05
UBE2D3-225ENST00000508476 ACSBG1Q96GR2 724 aa8.51□□□□□ -1.05
UBE2D3-225ENST00000508476 ATXN3LQ9H3M9 355 aa8.51□□□□□ -1.05
UBE2D3-225ENST00000508476 PIDD1Q9HB75 910 aa8.51□□□□□ -1.05
UBE2D3-225ENST00000508476 LEMD3Q9Y2U8 911 aa8.51□□□□□ -1.05
UBE2D3-225ENST00000508476 CSADQ9Y600 493 aa8.51□□□□□ -1.05
UBE2D3-225ENST00000508476 GRIK1P39086 918 aa8.5□□□□□ -1.05
UBE2D3-225ENST00000508476 CDK5R2Q13319 367 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms