RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 BTDP43251 543 aa18.22■□□□□ 0.51
RNF4-210ENST00000508235 FKBP1BP68106 108 aa18.22■□□□□ 0.51
RNF4-210ENST00000508235 FMR1Q06787 632 aaKnown RBP eCLIP18.22■□□□□ 0.51
RNF4-210ENST00000508235 CDC42EP5Q6NZY7 148 aa18.22■□□□□ 0.51
RNF4-210ENST00000508235 FAM83AQ86UY5 434 aa18.22■□□□□ 0.51
RNF4-210ENST00000508235 C2orf69Q8N8R5 385 aa18.22■□□□□ 0.51
RNF4-210ENST00000508235 USP40Q9NVE5 1235 aa18.22■□□□□ 0.51
RNF4-210ENST00000508235 ABT1Q9ULW3 272 aaKnown RBP18.22■□□□□ 0.51
RNF4-210ENST00000508235 NDUFB9Q9Y6M9 179 aa18.22■□□□□ 0.51
RNF4-210ENST00000508235 AOX1Q06278 1338 aa18.22■□□□□ 0.51
RNF4-210ENST00000508235 TCP10L2B9ZVM9 353 aa18.21■□□□□ 0.51
RNF4-210ENST00000508235 PLCG2P16885 1265 aa18.21■□□□□ 0.51
RNF4-210ENST00000508235 RASA3Q14644 834 aa18.21■□□□□ 0.51
RNF4-210ENST00000508235 SUPT20HL1Q3ZLR7 823 aa18.21■□□□□ 0.51
RNF4-210ENST00000508235 CHD1LQ86WJ1 897 aa18.21■□□□□ 0.51
RNF4-210ENST00000508235 CERS3Q8IU89 383 aa18.21■□□□□ 0.51
RNF4-210ENST00000508235 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.21■□□□□ 0.512e-7■■■■■ 29.7
RNF4-210ENST00000508235 ANTXR1Q9H6X2 564 aa18.21■□□□□ 0.51
RNF4-210ENST00000508235 GBA2Q9HCG7 927 aaPredicted RBP18.21■□□□□ 0.51
RNF4-210ENST00000508235 SCAF8Q9UPN6 1271 aaKnown RBP18.21■□□□□ 0.51
RNF4-210ENST00000508235 PAPPA2Q9BXP8 1791 aa18.2■□□□□ 0.5
RNF4-210ENST00000508235 MYH7P12883 1935 aa18.2■□□□□ 0.5
RNF4-210ENST00000508235 GLRX3O76003 335 aaKnown RBP18.2■□□□□ 0.5
RNF4-210ENST00000508235 NUCB1Q02818 461 aa18.2■□□□□ 0.5
RNF4-210ENST00000508235 B4GALNT3Q6L9W6 998 aa18.2■□□□□ 0.5
RNF4-210ENST00000508235 ZNF384Q8TF68 577 aa18.2■□□□□ 0.5
RNF4-210ENST00000508235 TLL2Q9Y6L7 1015 aa18.2■□□□□ 0.5
RNF4-210ENST00000508235 CYP7A1P22680 504 aa18.19■□□□□ 0.5
RNF4-210ENST00000508235 DLK2Q6UY11 383 aa18.19■□□□□ 0.5
RNF4-210ENST00000508235 MAGEB6Q8N7X4 407 aa18.19■□□□□ 0.5
RNF4-210ENST00000508235 HOOK2Q96ED9 719 aa18.19■□□□□ 0.5
RNF4-210ENST00000508235 IDI2Q9BXS1 227 aa18.19■□□□□ 0.5
RNF4-210ENST00000508235 LNPKQ9C0E8 428 aa18.19■□□□□ 0.5
RNF4-210ENST00000508235 RPAP1Q9BWH6 1393 aaPredicted RBP18.18■□□□□ 0.5
RNF4-210ENST00000508235 AK9Q5TCS8 1911 aa18.18■□□□□ 0.5
RNF4-210ENST00000508235 CACNB3P54284 484 aa18.18■□□□□ 0.5
RNF4-210ENST00000508235 SLC9C2Q5TAH2 1124 aa18.18■□□□□ 0.5
RNF4-210ENST00000508235 PRAMEF18Q5VWM3 479 aa18.18■□□□□ 0.5
RNF4-210ENST00000508235 ZSCAN25Q6NSZ9 544 aa18.18■□□□□ 0.5
RNF4-210ENST00000508235 SAPCD2Q86UD0 394 aa18.18■□□□□ 0.5
RNF4-210ENST00000508235 HHIPL1Q96JK4 782 aa18.18■□□□□ 0.5
RNF4-210ENST00000508235 PPP1R12BO60237 982 aaPredicted RBP18.17■□□□□ 0.5
RNF4-210ENST00000508235 ENTPD3O75355 529 aa18.17■□□□□ 0.5
RNF4-210ENST00000508235 NPM3O75607 178 aaKnown RBP18.17■□□□□ 0.5
RNF4-210ENST00000508235 PPP4CP60510 307 aa18.17■□□□□ 0.5
RNF4-210ENST00000508235 HTRA3P83110 453 aa18.17■□□□□ 0.5
RNF4-210ENST00000508235 TTLL12Q14166 644 aaPredicted RBP18.17■□□□□ 0.5
RNF4-210ENST00000508235 DEFB115Q30KQ5 88 aa18.17■□□□□ 0.5
RNF4-210ENST00000508235 LRRFIP1Q32MZ4 808 aaKnown RBP18.17■□□□□ 0.5
RNF4-210ENST00000508235 ARMC9Q7Z3E5 817 aa18.17■□□□□ 0.5
RNF4-210ENST00000508235 FAM151AQ8WW52 585 aa18.17■□□□□ 0.5
RNF4-210ENST00000508235 AATFQ9NY61 560 aaKnown RBP eCLIP18.17■□□□□ 0.5
RNF4-210ENST00000508235 STAP2Q9UGK3 403 aa18.17■□□□□ 0.5
RNF4-210ENST00000508235 SALL3Q9BXA9 1300 aa18.17■□□□□ 0.5
RNF4-210ENST00000508235 CNTNAP1P78357 1384 aa18.17■□□□□ 0.5
RNF4-210ENST00000508235 RASSF10A6NK89 507 aa18.16■□□□□ 0.5
RNF4-210ENST00000508235 PDE1AP54750 535 aa18.16■□□□□ 0.5
RNF4-210ENST00000508235 TSHZ3Q63HK5 1081 aa18.16■□□□□ 0.5
RNF4-210ENST00000508235 PI4K2BQ8TCG2 481 aa18.16■□□□□ 0.5
RNF4-210ENST00000508235 OTUD7AQ8TE49 926 aaPredicted RBP18.16■□□□□ 0.5
RNF4-210ENST00000508235 EDC3Q96F86 508 aaKnown RBP18.16■□□□□ 0.5
RNF4-210ENST00000508235 TMEM39BQ9GZU3 492 aa18.16■□□□□ 0.5
RNF4-210ENST00000508235 PDE6AP16499 860 aa18.15■□□□□ 0.5
RNF4-210ENST00000508235 ECE1P42892 770 aa18.15■□□□□ 0.5
RNF4-210ENST00000508235 RGS3P49796 1198 aa18.15■□□□□ 0.5
RNF4-210ENST00000508235 HUNKP57058 714 aa18.15■□□□□ 0.5
RNF4-210ENST00000508235 RHBDL3P58872 404 aa18.15■□□□□ 0.5
RNF4-210ENST00000508235 TCP10Q12799 353 aa18.15■□□□□ 0.5
RNF4-210ENST00000508235 ADGRA1Q86SQ6 560 aa18.15■□□□□ 0.5
RNF4-210ENST00000508235 TEPSINQ96N21 525 aa18.15■□□□□ 0.5
RNF4-210ENST00000508235 FOCADQ5VW36 1801 aa18.14■□□□□ 0.5
RNF4-210ENST00000508235 NFIAQ12857 509 aa18.14■□□□□ 0.49
RNF4-210ENST00000508235 UBE3CQ15386 1083 aa18.14■□□□□ 0.49
RNF4-210ENST00000508235 NBPF12Q5TAG4 269 aaPredicted RBP18.14■□□□□ 0.49
RNF4-210ENST00000508235 TEX11Q8IYF3 940 aa18.14■□□□□ 0.49
RNF4-210ENST00000508235 KBTBD3Q8NAB2 608 aa18.14■□□□□ 0.49
RNF4-210ENST00000508235 FAM198AQ9UFP1 575 aa18.14■□□□□ 0.49
RNF4-210ENST00000508235 ZNF532Q9HCE3 1301 aa18.14■□□□□ 0.49
RNF4-210ENST00000508235 RFX7Q2KHR2 1363 aa18.14■□□□□ 0.49
RNF4-210ENST00000508235 CDK5RAP2Q96SN8 1893 aa18.14■□□□□ 0.49
RNF4-210ENST00000508235 MAGEB6P1A0A0J9YX57 407 aa18.13■□□□□ 0.49
RNF4-210ENST00000508235 UNCXA6NJT0 531 aa18.13■□□□□ 0.49
RNF4-210ENST00000508235 WDHD1O75717 1129 aaPredicted RBP18.13■□□□□ 0.49
RNF4-210ENST00000508235 ZFYP08048 801 aaPredicted RBP18.13■□□□□ 0.49
RNF4-210ENST00000508235 ADD2P35612 726 aa18.13■□□□□ 0.49
RNF4-210ENST00000508235 IREB2P48200 963 aaKnown RBP18.13■□□□□ 0.49
RNF4-210ENST00000508235 DCAF15Q66K64 600 aa18.13■□□□□ 0.49
RNF4-210ENST00000508235 PAXIP1Q6ZW49 1069 aaPredicted RBP18.13■□□□□ 0.49
RNF4-210ENST00000508235 SH3RF3Q8TEJ3 882 aaPredicted RBP18.13■□□□□ 0.49
RNF4-210ENST00000508235 KLRG1Q96E93 195 aa18.13■□□□□ 0.49
RNF4-210ENST00000508235 MKRN1Q9UHC7 482 aaKnown RBP18.13■□□□□ 0.49
RNF4-210ENST00000508235 ANGEL1Q9UNK9 670 aaKnown RBP18.13■□□□□ 0.49
RNF4-210ENST00000508235 PICALMQ13492 652 aa18.12■□□□□ 0.49
RNF4-210ENST00000508235 MAP3K11Q16584 847 aa18.12■□□□□ 0.49
RNF4-210ENST00000508235 RGMBQ6NW40 437 aa18.12■□□□□ 0.49
RNF4-210ENST00000508235 CENPQQ7L2Z9 268 aaPredicted RBP18.12■□□□□ 0.49
RNF4-210ENST00000508235 ZSCAN29Q8IWY8 852 aaPredicted RBP18.12■□□□□ 0.49
RNF4-210ENST00000508235 DNAJC5GQ8N7S2 189 aa18.12■□□□□ 0.49
RNF4-210ENST00000508235 MIGA1Q8NAN2 632 aa18.12■□□□□ 0.49
RNF4-210ENST00000508235 OSBPL3Q9H4L5 887 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms