RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 USP27XA6NNY8 438 aa12.26□□□□□ -0.45
PDLIM5-210ENST00000508216 ANKRD65E5RJM6 399 aa12.26□□□□□ -0.45
PDLIM5-210ENST00000508216 CYP27B1O15528 508 aa12.26□□□□□ -0.45
PDLIM5-210ENST00000508216 MEFVO15553 781 aaPredicted RBP12.26□□□□□ -0.45
PDLIM5-210ENST00000508216 ETF1P62495 437 aaKnown RBP12.26□□□□□ -0.45
PDLIM5-210ENST00000508216 CUL4AQ13619 759 aa12.26□□□□□ -0.45
PDLIM5-210ENST00000508216 BZW1Q7L1Q6 419 aaKnown RBP12.26□□□□□ -0.45
PDLIM5-210ENST00000508216 LRRC49Q8IUZ0 686 aa12.26□□□□□ -0.45
PDLIM5-210ENST00000508216 CCDC65Q8IXS2 484 aa12.26□□□□□ -0.45
PDLIM5-210ENST00000508216 FNBP4Q8N3X1 1017 aaPredicted RBP12.26□□□□□ -0.45
PDLIM5-210ENST00000508216 AFAP1L1Q8TED9 768 aa12.26□□□□□ -0.45
PDLIM5-210ENST00000508216 PPP2R3CQ969Q6 453 aa12.26□□□□□ -0.45
PDLIM5-210ENST00000508216 RUFY1Q96T51 708 aa12.26□□□□□ -0.45
PDLIM5-210ENST00000508216 BICC1Q9H694 974 aaKnown RBP12.26□□□□□ -0.45
PDLIM5-210ENST00000508216 TMCO1Q9UM00 188 aa12.26□□□□□ -0.45
PDLIM5-210ENST00000508216 COG6Q9Y2V7 657 aa12.26□□□□□ -0.45
PDLIM5-210ENST00000508216 TMED5Q9Y3A6 229 aa12.26□□□□□ -0.45
PDLIM5-210ENST00000508216 CCDC141Q6ZP82 1450 aa12.26□□□□□ -0.45
PDLIM5-210ENST00000508216 PTPRKQ15262 1439 aa12.26□□□□□ -0.45
PDLIM5-210ENST00000508216 M0R2C6 588 aa12.25□□□□□ -0.45
PDLIM5-210ENST00000508216 ZNF189O75820 626 aaPredicted RBP12.25□□□□□ -0.45
PDLIM5-210ENST00000508216 MCM3P25205 808 aa12.25□□□□□ -0.45
PDLIM5-210ENST00000508216 HOXD10P28358 340 aa12.25□□□□□ -0.45
PDLIM5-210ENST00000508216 HDAC4P56524 1084 aa12.25□□□□□ -0.45
PDLIM5-210ENST00000508216 EVCP57679 992 aa12.25□□□□□ -0.45
PDLIM5-210ENST00000508216 CUL4BQ13620 913 aa12.25□□□□□ -0.45
PDLIM5-210ENST00000508216 CCDC40Q4G0X9 1142 aa12.25□□□□□ -0.45
PDLIM5-210ENST00000508216 BEND6Q5SZJ8 279 aaPredicted RBP12.25□□□□□ -0.45
PDLIM5-210ENST00000508216 RSPH3Q86UC2 560 aa12.25□□□□□ -0.45
PDLIM5-210ENST00000508216 SPAG5Q96R06 1193 aa12.25□□□□□ -0.45
PDLIM5-210ENST00000508216 CRISPLD2Q9H0B8 497 aa12.25□□□□□ -0.45
PDLIM5-210ENST00000508216 GBP3Q9H0R5 595 aa12.25□□□□□ -0.45
PDLIM5-210ENST00000508216 ACTR5Q9H9F9 607 aaPredicted RBP12.25□□□□□ -0.45
PDLIM5-210ENST00000508216 PCDH18Q9HCL0 1135 aa12.25□□□□□ -0.45
PDLIM5-210ENST00000508216 PDE11AQ9HCR9 933 aa12.25□□□□□ -0.45
PDLIM5-210ENST00000508216 TUBGCP4Q9UGJ1 667 aa12.25□□□□□ -0.45
PDLIM5-210ENST00000508216 RABL2BQ9UNT1 228 aa12.25□□□□□ -0.45
PDLIM5-210ENST00000508216 IQSEC3Q9UPP2 1182 aaPredicted RBP12.25□□□□□ -0.45
PDLIM5-210ENST00000508216 MAPK8IP1Q9UQF2 711 aa12.25□□□□□ -0.45
PDLIM5-210ENST00000508216 SUGT1Q9Y2Z0 365 aa12.25□□□□□ -0.45
PDLIM5-210ENST00000508216 CDC42BPAQ5VT25 1732 aa12.25□□□□□ -0.45
PDLIM5-210ENST00000508216 MRC2Q9UBG0 1479 aa12.25□□□□□ -0.45
PDLIM5-210ENST00000508216 YTHDC2Q9H6S0 1430 aaKnown RBP12.25□□□□□ -0.45
PDLIM5-210ENST00000508216 NCKAP5LQ9HCH0 1330 aa12.25□□□□□ -0.45
PDLIM5-210ENST00000508216 BCAR3O75815 825 aa12.25□□□□□ -0.45
PDLIM5-210ENST00000508216 MMEP08473 750 aa12.25□□□□□ -0.45
PDLIM5-210ENST00000508216 ACTN3Q08043 901 aaPredicted RBP12.25□□□□□ -0.45
PDLIM5-210ENST00000508216 BLMHQ13867 455 aa12.25□□□□□ -0.45
PDLIM5-210ENST00000508216 CYB5RLQ6IPT4 315 aa12.25□□□□□ -0.45
PDLIM5-210ENST00000508216 LCA5Q86VQ0 697 aa12.25□□□□□ -0.45
PDLIM5-210ENST00000508216 KLHDC4Q8TBB5 520 aa12.25□□□□□ -0.45
PDLIM5-210ENST00000508216 CCHCR1Q8TD31 782 aa12.25□□□□□ -0.45
PDLIM5-210ENST00000508216 MOV10L1Q9BXT6 1211 aaKnown RBP12.25□□□□□ -0.45
PDLIM5-210ENST00000508216 HOXC10Q9NYD6 342 aa12.25□□□□□ -0.45
PDLIM5-210ENST00000508216 CIDEBQ9UHD4 219 aa12.25□□□□□ -0.45
PDLIM5-210ENST00000508216 L1RE1Q9UN81 338 aa12.25□□□□□ -0.45
PDLIM5-210ENST00000508216 ITM2BQ9Y287 266 aa12.25□□□□□ -0.45
PDLIM5-210ENST00000508216 SENP3-EIF4A1A0A087X0R7 540 aa12.24□□□□□ -0.45
PDLIM5-210ENST00000508216 SKAP2O75563 359 aaPredicted RBP12.24□□□□□ -0.45
PDLIM5-210ENST00000508216 LUC7L3O95232 432 aaKnown RBP12.24□□□□□ -0.45
PDLIM5-210ENST00000508216 U2AF1L5P0DN76 240 aaPredicted RBP12.24□□□□□ -0.45
PDLIM5-210ENST00000508216 U2AF1Q01081 240 aaKnown RBP eCLIP12.24□□□□□ -0.451e-7■■■■■ 28.2
PDLIM5-210ENST00000508216 USH1GQ495M9 461 aa12.24□□□□□ -0.45
PDLIM5-210ENST00000508216 ANKRD13AQ8IZ07 590 aa12.24□□□□□ -0.45
PDLIM5-210ENST00000508216 LRRN4CLQ8ND94 238 aa12.24□□□□□ -0.45
PDLIM5-210ENST00000508216 LEO1Q8WVC0 666 aaPredicted RBP12.24□□□□□ -0.45
PDLIM5-210ENST00000508216 TSC22D3Q99576 134 aa12.24□□□□□ -0.45
PDLIM5-210ENST00000508216 SNAPC4Q5SXM2 1469 aa12.24□□□□□ -0.45
PDLIM5-210ENST00000508216 ITSN2Q9NZM3 1697 aa12.24□□□□□ -0.45
PDLIM5-210ENST00000508216 ARHGEF12Q9NZN5 1544 aa12.23□□□□□ -0.45
PDLIM5-210ENST00000508216 SRRM3A6NNA2 597 aaPredicted RBP12.23□□□□□ -0.45
PDLIM5-210ENST00000508216 ZSCAN12O43309 604 aa12.23□□□□□ -0.45
PDLIM5-210ENST00000508216 KIAA0754O94854 1291 aa12.23□□□□□ -0.45
PDLIM5-210ENST00000508216 PRPF6O94906 941 aaKnown RBP12.23□□□□□ -0.45
PDLIM5-210ENST00000508216 CNGA1P29973 690 aa12.23□□□□□ -0.45
PDLIM5-210ENST00000508216 TXLNAP40222 546 aa12.23□□□□□ -0.45
PDLIM5-210ENST00000508216 PSMC4P43686 418 aa12.23□□□□□ -0.45
PDLIM5-210ENST00000508216 PACS1Q6VY07 963 aa12.23□□□□□ -0.45
PDLIM5-210ENST00000508216 TMEM110Q86TL2 294 aa12.23□□□□□ -0.45
PDLIM5-210ENST00000508216 LUZP1Q86V48 1076 aa12.23□□□□□ -0.45
PDLIM5-210ENST00000508216 SLF2Q8IX21 1173 aa12.23□□□□□ -0.45
PDLIM5-210ENST00000508216 MSANTD4Q8NCY6 345 aa12.23□□□□□ -0.45
PDLIM5-210ENST00000508216 ANKK1Q8NFD2 765 aa12.23□□□□□ -0.45
PDLIM5-210ENST00000508216 SPIRE2Q8WWL2 714 aa12.23□□□□□ -0.45
PDLIM5-210ENST00000508216 GIMAP1Q8WWP7 306 aa12.23□□□□□ -0.45
PDLIM5-210ENST00000508216 DHTKD1Q96HY7 919 aaPredicted RBP12.23□□□□□ -0.45
PDLIM5-210ENST00000508216 CLIC6Q96NY7 704 aa12.23□□□□□ -0.45
PDLIM5-210ENST00000508216 PRAM1Q96QH2 718 aa12.23□□□□□ -0.45
PDLIM5-210ENST00000508216 PICK1Q9NRD5 415 aa12.23□□□□□ -0.45
PDLIM5-210ENST00000508216 GOLGA8AA7E2F4 631 aa12.23□□□□□ -0.45
PDLIM5-210ENST00000508216 MYO1FO00160 1098 aa12.23□□□□□ -0.45
PDLIM5-210ENST00000508216 PER1O15534 1290 aaPredicted RBP12.23□□□□□ -0.45
PDLIM5-210ENST00000508216 NPTXRO95502 500 aa12.23□□□□□ -0.45
PDLIM5-210ENST00000508216 CCDC166P0CW27 439 aa12.23□□□□□ -0.45
PDLIM5-210ENST00000508216 BCRP11274 1271 aa12.23□□□□□ -0.45
PDLIM5-210ENST00000508216 PEX5LQ8IYB4 626 aa12.23□□□□□ -0.45
PDLIM5-210ENST00000508216 MPHOSPH8Q99549 860 aa12.23□□□□□ -0.45
PDLIM5-210ENST00000508216 OSBPL5Q9H0X9 879 aaPredicted RBP12.23□□□□□ -0.45
PDLIM5-210ENST00000508216 FAM204AQ9H8W3 233 aa12.23□□□□□ -0.45
PDLIM5-210ENST00000508216 SENP2Q9HC62 589 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms