RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 MFSD14AQ96MC6 490 aa6.3□□□□□ -1.4
HMGB1P29-201ENST00000505659 NECAB3Q96P71 396 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P29-201ENST00000505659 DUSP9Q99956 384 aaKnown RBP6.3□□□□□ -1.4
HMGB1P29-201ENST00000505659 DBNDD2Q9BQY9 259 aa6.3□□□□□ -1.4
HMGB1P29-201ENST00000505659 RNF112Q9ULX5 631 aa6.3□□□□□ -1.4
HMGB1P29-201ENST00000505659 SPG7Q9UQ90 795 aa6.3□□□□□ -1.4
HMGB1P29-201ENST00000505659 FAM95CA0A1B0GW59 222 aa6.29□□□□□ -1.4
HMGB1P29-201ENST00000505659 TMPRSS2O15393 492 aa6.29□□□□□ -1.4
HMGB1P29-201ENST00000505659 MED26O95402 600 aa6.29□□□□□ -1.4
HMGB1P29-201ENST00000505659 NFICP08651 508 aa6.29□□□□□ -1.4
HMGB1P29-201ENST00000505659 CELA3AP09093 270 aa6.29□□□□□ -1.4
HMGB1P29-201ENST00000505659 SSTR4P31391 388 aa6.29□□□□□ -1.4
HMGB1P29-201ENST00000505659 NFKBIBQ15653 356 aa6.29□□□□□ -1.4
HMGB1P29-201ENST00000505659 ARTNQ5T4W7 220 aa6.29□□□□□ -1.4
HMGB1P29-201ENST00000505659 FBXL6Q8N531 539 aa6.29□□□□□ -1.4
HMGB1P29-201ENST00000505659 SHKBP1Q8TBC3 707 aa6.29□□□□□ -1.4
HMGB1P29-201ENST00000505659 GRIN3AQ8TCU5 1115 aa6.29□□□□□ -1.4
HMGB1P29-201ENST00000505659 GSC2O15499 205 aa6.28□□□□□ -1.4
HMGB1P29-201ENST00000505659 DYNC1LI2O43237 492 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P29-201ENST00000505659 HYAL3O43820 417 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P29-201ENST00000505659 PRPF40AO75400 957 aaKnown RBP6.28□□□□□ -1.4
HMGB1P29-201ENST00000505659 GNA15P30679 374 aa6.28□□□□□ -1.4
HMGB1P29-201ENST00000505659 ADMP35318 185 aa6.28□□□□□ -1.4
HMGB1P29-201ENST00000505659 ASPAP45381 313 aa6.28□□□□□ -1.4
HMGB1P29-201ENST00000505659 TAGLNQ01995 201 aaKnown RBP6.28□□□□□ -1.4
HMGB1P29-201ENST00000505659 LRP8Q14114 963 aa6.28□□□□□ -1.4
HMGB1P29-201ENST00000505659 EAPPQ56P03 285 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P29-201ENST00000505659 HP1BP3Q5SSJ5 553 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P29-201ENST00000505659 MAP1SQ66K74 1059 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P29-201ENST00000505659 SRCIN1Q9C0H9 1055 aa6.28□□□□□ -1.4
HMGB1P29-201ENST00000505659 SEMA6CQ9H3T2 930 aa6.28□□□□□ -1.4
HMGB1P29-201ENST00000505659 ZFYVE1Q9HBF4 777 aa6.28□□□□□ -1.4
HMGB1P29-201ENST00000505659 LGR6Q9HBX8 967 aa6.28□□□□□ -1.4
HMGB1P29-201ENST00000505659 CBX8Q9HC52 389 aa6.28□□□□□ -1.4
HMGB1P29-201ENST00000505659 ZFP64Q9NPA5 681 aa6.28□□□□□ -1.4
HMGB1P29-201ENST00000505659 PCDHGC5Q9Y5F6 944 aa6.28□□□□□ -1.4
HMGB1P29-201ENST00000505659 PRR19A6NJB7 356 aa6.27□□□□□ -1.41
HMGB1P29-201ENST00000505659 WDR64B1ANS9 1081 aa6.27□□□□□ -1.41
HMGB1P29-201ENST00000505659 F13BP05160 661 aa6.27□□□□□ -1.41
HMGB1P29-201ENST00000505659 NME2P22392 152 aa6.27□□□□□ -1.41
HMGB1P29-201ENST00000505659 ARNTP27540 789 aa6.27□□□□□ -1.41
HMGB1P29-201ENST00000505659 EZH1Q92800 747 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P29-201ENST00000505659 FAM161BQ96MY7 647 aa6.27□□□□□ -1.41
HMGB1P29-201ENST00000505659 GSX1Q9H4S2 264 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P29-201ENST00000505659 ACSS3Q9H6R3 686 aa6.27□□□□□ -1.41
HMGB1P29-201ENST00000505659 FAM8A1Q9UBU6 413 aa6.27□□□□□ -1.41
HMGB1P29-201ENST00000505659 PRKAG2Q9UGJ0 569 aa6.27□□□□□ -1.41
HMGB1P29-201ENST00000505659 GIPC1O14908 333 aa6.26□□□□□ -1.41
HMGB1P29-201ENST00000505659 BMP6P22004 513 aa6.26□□□□□ -1.41
HMGB1P29-201ENST00000505659 ZNF252P-AS1Q0IIN9 211 aa6.26□□□□□ -1.41
HMGB1P29-201ENST00000505659 KIF4BQ2VIQ3 1234 aa6.26□□□□□ -1.41
HMGB1P29-201ENST00000505659 PAOXQ6QHF9 649 aa6.26□□□□□ -1.41
HMGB1P29-201ENST00000505659 GPBAR1Q8TDU6 330 aa6.26□□□□□ -1.41
HMGB1P29-201ENST00000505659 FANCD2OSQ96PS1 177 aa6.26□□□□□ -1.41
HMGB1P29-201ENST00000505659 KRT82Q9NSB4 513 aa6.26□□□□□ -1.41
HMGB1P29-201ENST00000505659 CRIM1Q9NZV1 1036 aa6.26□□□□□ -1.41
HMGB1P29-201ENST00000505659 PPM1HQ9ULR3 514 aa6.26□□□□□ -1.41
HMGB1P29-201ENST00000505659 TTF2Q9UNY4 1162 aaKnown RBP6.26□□□□□ -1.41
HMGB1P29-201ENST00000505659 DAGLAQ9Y4D2 1042 aa6.26□□□□□ -1.41
HMGB1P29-201ENST00000505659 EIF4BP23588 611 aaKnown RBP6.25□□□□□ -1.41
HMGB1P29-201ENST00000505659 HOXA10P31260 410 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P29-201ENST00000505659 CD97P48960 835 aa6.25□□□□□ -1.41
HMGB1P29-201ENST00000505659 ID3Q02535 119 aa6.25□□□□□ -1.41
HMGB1P29-201ENST00000505659 COL19A1Q14993 1142 aa6.25□□□□□ -1.41
HMGB1P29-201ENST00000505659 FBXO33Q7Z6M2 555 aa6.25□□□□□ -1.41
HMGB1P29-201ENST00000505659 SLC51AQ86UW1 340 aa6.25□□□□□ -1.41
HMGB1P29-201ENST00000505659 GATA6Q92908 595 aa6.25□□□□□ -1.41
HMGB1P29-201ENST00000505659 CEP44Q9C0F1 390 aa6.25□□□□□ -1.41
HMGB1P29-201ENST00000505659 DISC1Q9NRI5 854 aa6.25□□□□□ -1.41
HMGB1P29-201ENST00000505659 PARP2Q9UGN5 583 aa6.25□□□□□ -1.41
HMGB1P29-201ENST00000505659 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P29-201ENST00000505659 FAM170BA6NMN3 283 aa6.24□□□□□ -1.41
HMGB1P29-201ENST00000505659 NEFMP07197 916 aa6.24□□□□□ -1.41
HMGB1P29-201ENST00000505659 HCLS1P14317 486 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P29-201ENST00000505659 CCDC27Q2M243 656 aa6.24□□□□□ -1.41
HMGB1P29-201ENST00000505659 MEI1Q5TIA1 1274 aa6.24□□□□□ -1.41
HMGB1P29-201ENST00000505659 PCNX4Q63HM2 1172 aa6.24□□□□□ -1.41
HMGB1P29-201ENST00000505659 TBC1D32Q96NH3 1257 aa6.24□□□□□ -1.41
HMGB1P29-201ENST00000505659 YIPF2Q9BWQ6 316 aa6.24□□□□□ -1.41
HMGB1P29-201ENST00000505659 CSADQ9Y600 493 aa6.24□□□□□ -1.41
HMGB1P29-201ENST00000505659 SYNGAP1Q96PV0 1343 aa6.24□□□□□ -1.41
HMGB1P29-201ENST00000505659 SLFN14P0C7P3 912 aa6.23□□□□□ -1.41
HMGB1P29-201ENST00000505659 PTPN11Q06124 597 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P29-201ENST00000505659 TTLL4Q14679 1199 aa6.23□□□□□ -1.41
HMGB1P29-201ENST00000505659 SEZ6L2Q6UXD5 910 aa6.23□□□□□ -1.41
HMGB1P29-201ENST00000505659 ZAR1Q86SH2 424 aa6.23□□□□□ -1.41
HMGB1P29-201ENST00000505659 ACSBG1Q96GR2 724 aa6.23□□□□□ -1.41
HMGB1P29-201ENST00000505659 EMILIN2Q9BXX0 1053 aa6.23□□□□□ -1.41
HMGB1P29-201ENST00000505659 PIDD1Q9HB75 910 aa6.23□□□□□ -1.41
HMGB1P29-201ENST00000505659 C1GALT1Q9NS00 363 aa6.23□□□□□ -1.41
HMGB1P29-201ENST00000505659 PCMTD2Q9NV79 361 aa6.23□□□□□ -1.41
HMGB1P29-201ENST00000505659 CACNA2D2Q9NY47 1150 aa6.23□□□□□ -1.41
HMGB1P29-201ENST00000505659 AK5Q9Y6K8 562 aa6.23□□□□□ -1.41
HMGB1P29-201ENST00000505659 DCDC2CA8MYV0 355 aa6.22□□□□□ -1.41
HMGB1P29-201ENST00000505659 COBLO75128 1261 aa6.22□□□□□ -1.41
HMGB1P29-201ENST00000505659 ADAMTS4O75173 837 aa6.22□□□□□ -1.41
HMGB1P29-201ENST00000505659 CDK5R2Q13319 367 aa6.22□□□□□ -1.41
HMGB1P29-201ENST00000505659 MAP7Q14244 749 aa6.22□□□□□ -1.41
HMGB1P29-201ENST00000505659 ZC3H12AQ5D1E8 599 aaKnown RBP6.22□□□□□ -1.41
HMGB1P29-201ENST00000505659 LLGL2Q6P1M3 1020 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms