RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 TAF1DQ9H5J8 278 aaPredicted RBP6.02□□□□□ -1.45
LMNB1-208ENST00000504788 TTF2Q9UNY4 1162 aaKnown RBP6.02□□□□□ -1.45
LMNB1-208ENST00000504788 DAGLAQ9Y4D2 1042 aa6.02□□□□□ -1.45
LMNB1-208ENST00000504788 NAV1Q8NEY1 1877 aa6.01□□□□□ -1.45
LMNB1-208ENST00000504788 LAMA4Q16363 1823 aa6.01□□□□□ -1.45
LMNB1-208ENST00000504788 SSC5DA1L4H1 1573 aa6.01□□□□□ -1.45
LMNB1-208ENST00000504788 CNTNAP1P78357 1384 aa6.01□□□□□ -1.45
LMNB1-208ENST00000504788 ATRNL1Q5VV63 1379 aa6.01□□□□□ -1.45
LMNB1-208ENST00000504788 RPAP1Q9BWH6 1393 aaPredicted RBP6.01□□□□□ -1.45
LMNB1-208ENST00000504788 CEP350Q5VT06 3117 aa6.01□□□□□ -1.45
LMNB1-208ENST00000504788 MROH7-TTC4A0A0A0MT08 1334 aa6.01□□□□□ -1.45
LMNB1-208ENST00000504788 ERC2O15083 957 aa6.01□□□□□ -1.45
LMNB1-208ENST00000504788 WDHD1O75717 1129 aaPredicted RBP6.01□□□□□ -1.45
LMNB1-208ENST00000504788 CRKP46108 304 aa6.01□□□□□ -1.45
LMNB1-208ENST00000504788 MMP14P50281 582 aa6.01□□□□□ -1.45
LMNB1-208ENST00000504788 UBE3CQ15386 1083 aa6.01□□□□□ -1.45
LMNB1-208ENST00000504788 OSBP2Q969R2 916 aa6.01□□□□□ -1.45
LMNB1-208ENST00000504788 EVI5LQ96CN4 794 aa6.01□□□□□ -1.45
LMNB1-208ENST00000504788 SEC62Q99442 399 aaKnown RBP6.01□□□□□ -1.45
LMNB1-208ENST00000504788 PUS7LQ9H0K6 701 aaKnown RBP6.01□□□□□ -1.45
LMNB1-208ENST00000504788 MYOZ2Q9NPC6 264 aa6.01□□□□□ -1.45
LMNB1-208ENST00000504788 ABCF2Q9UG63 623 aa6.01□□□□□ -1.45
LMNB1-208ENST00000504788 OTOFQ9HC10 1997 aa6.01□□□□□ -1.45
LMNB1-208ENST00000504788 ZNF532Q9HCE3 1301 aa6□□□□□ -1.45
LMNB1-208ENST00000504788 GREB1LQ9C091 1923 aaPredicted RBP6□□□□□ -1.45
LMNB1-208ENST00000504788 A0A0D9SFI3 127 aa6□□□□□ -1.45
LMNB1-208ENST00000504788 LDHBP07195 334 aaKnown RBP6□□□□□ -1.45
LMNB1-208ENST00000504788 TTF1Q15361 905 aaPredicted RBP6□□□□□ -1.45
LMNB1-208ENST00000504788 ZMYM1Q5SVZ6 1142 aa6□□□□□ -1.45
LMNB1-208ENST00000504788 SLC9C2Q5TAH2 1124 aa6□□□□□ -1.45
LMNB1-208ENST00000504788 DPY19L2Q6NUT2 758 aa6□□□□□ -1.45
LMNB1-208ENST00000504788 TMED8Q6PL24 325 aaPredicted RBP6□□□□□ -1.45
LMNB1-208ENST00000504788 ERICH6Q7L0X2 663 aa6□□□□□ -1.45
LMNB1-208ENST00000504788 CDAN1Q8IWY9 1227 aa6□□□□□ -1.45
LMNB1-208ENST00000504788 ZGPATQ8N5A5 531 aaKnown RBP6□□□□□ -1.45
LMNB1-208ENST00000504788 ZNF784Q8NCA9 323 aaPredicted RBP6□□□□□ -1.45
LMNB1-208ENST00000504788 TEPSINQ96N21 525 aa6□□□□□ -1.45
LMNB1-208ENST00000504788 BCL11AQ9H165 835 aa6□□□□□ -1.45
LMNB1-208ENST00000504788 DDX4Q9NQI0 724 aaKnown RBP6□□□□□ -1.45
LMNB1-208ENST00000504788 GJA3Q9Y6H8 435 aa6□□□□□ -1.45
LMNB1-208ENST00000504788 COL2A1P02458 1487 aaPredicted RBP6□□□□□ -1.45
LMNB1-208ENST00000504788 MAST3O60307 1309 aa6□□□□□ -1.45
LMNB1-208ENST00000504788 TRPM7Q96QT4 1865 aa6□□□□□ -1.45
LMNB1-208ENST00000504788 F8W031 263 aaPredicted RBP5.99□□□□□ -1.45
LMNB1-208ENST00000504788 M0R2C6 588 aa5.99□□□□□ -1.45
LMNB1-208ENST00000504788 IDH1O75874 414 aaKnown RBP5.99□□□□□ -1.45
LMNB1-208ENST00000504788 ITGBL1O95965 494 aaPredicted RBP5.99□□□□□ -1.45
LMNB1-208ENST00000504788 CHMLP26374 656 aa5.99□□□□□ -1.45
LMNB1-208ENST00000504788 EPHX2P34913 555 aa5.99□□□□□ -1.45
LMNB1-208ENST00000504788 RGS3P49796 1198 aa5.99□□□□□ -1.45
LMNB1-208ENST00000504788 DYNLL1P63167 89 aaKnown RBP5.99□□□□□ -1.45
LMNB1-208ENST00000504788 NFIAQ12857 509 aa5.99□□□□□ -1.45
LMNB1-208ENST00000504788 CFAP100Q494V2 611 aa5.99□□□□□ -1.45
LMNB1-208ENST00000504788 CDC42EP5Q6NZY7 148 aa5.99□□□□□ -1.45
LMNB1-208ENST00000504788 ZNF589Q86UQ0 364 aaPredicted RBP5.99□□□□□ -1.45
LMNB1-208ENST00000504788 MAGEB6Q8N7X4 407 aa5.99□□□□□ -1.45
LMNB1-208ENST00000504788 GPATCH3Q96I76 525 aa5.99□□□□□ -1.45
LMNB1-208ENST00000504788 FAM227BQ96M60 508 aa5.99□□□□□ -1.45
LMNB1-208ENST00000504788 IDI2Q9BXS1 227 aa5.99□□□□□ -1.45
LMNB1-208ENST00000504788 ADARB2Q9NS39 739 aaKnown RBP5.99□□□□□ -1.45
LMNB1-208ENST00000504788 FAM198AQ9UFP1 575 aa5.99□□□□□ -1.45
LMNB1-208ENST00000504788 HACL1Q9UJ83 578 aa5.99□□□□□ -1.45
LMNB1-208ENST00000504788 PHIPQ8WWQ0 1821 aa5.99□□□□□ -1.45
LMNB1-208ENST00000504788 SMIM22K7EJ46 135 aa5.99□□□□□ -1.45
LMNB1-208ENST00000504788 RNF113AO15541 343 aaKnown RBP5.99□□□□□ -1.45
LMNB1-208ENST00000504788 FRAT2O75474 233 aaPredicted RBP5.99□□□□□ -1.45
LMNB1-208ENST00000504788 VEGFAP15692 232 aaPredicted RBP5.99□□□□□ -1.45
LMNB1-208ENST00000504788 MAP3K12Q12852 859 aa5.99□□□□□ -1.45
LMNB1-208ENST00000504788 KIF4BQ2VIQ3 1234 aa5.99□□□□□ -1.45
LMNB1-208ENST00000504788 TBC1D10BQ4KMP7 808 aaPredicted RBP5.99□□□□□ -1.45
LMNB1-208ENST00000504788 SPTY2D1Q68D10 685 aaPredicted RBP5.99□□□□□ -1.45
LMNB1-208ENST00000504788 DLK2Q6UY11 383 aa5.99□□□□□ -1.45
LMNB1-208ENST00000504788 USP50Q70EL3 339 aaPredicted RBP5.99□□□□□ -1.45
LMNB1-208ENST00000504788 SH3BP5LQ7L8J4 393 aa5.99□□□□□ -1.45
LMNB1-208ENST00000504788 ZFPM1Q8IX07 1006 aa5.99□□□□□ -1.45
LMNB1-208ENST00000504788 LCORLQ8N3X6 602 aa5.99□□□□□ -1.45
LMNB1-208ENST00000504788 SLC39A7Q92504 469 aa5.99□□□□□ -1.45
LMNB1-208ENST00000504788 APPBP2Q92624 585 aa5.99□□□□□ -1.45
LMNB1-208ENST00000504788 TEKT1Q969V4 418 aa5.99□□□□□ -1.45
LMNB1-208ENST00000504788 STRBPQ96SI9 672 aaKnown RBP5.99□□□□□ -1.45
LMNB1-208ENST00000504788 RRAGCQ9HB90 399 aa5.99□□□□□ -1.45
LMNB1-208ENST00000504788 EPB41L4AQ9HCS5 686 aaPredicted RBP5.99□□□□□ -1.45
LMNB1-208ENST00000504788 LRP2BPQ9P2M1 347 aa5.99□□□□□ -1.45
LMNB1-208ENST00000504788 PITPNM2Q9BZ72 1349 aa5.98□□□□□ -1.45
LMNB1-208ENST00000504788 G3V3G9 751 aa5.98□□□□□ -1.45
LMNB1-208ENST00000504788 C7P10643 843 aa5.98□□□□□ -1.45
LMNB1-208ENST00000504788 BTDP43251 543 aa5.98□□□□□ -1.45
LMNB1-208ENST00000504788 MAP3K10Q02779 954 aa5.98□□□□□ -1.45
LMNB1-208ENST00000504788 NMIQ13287 307 aaPredicted RBP5.98□□□□□ -1.45
LMNB1-208ENST00000504788 DCAF8Q5TAQ9 597 aa5.98□□□□□ -1.45
LMNB1-208ENST00000504788 VPS53Q5VIR6 699 aa5.98□□□□□ -1.45
LMNB1-208ENST00000504788 FKBP1CQ5VVH2 108 aa5.98□□□□□ -1.45
LMNB1-208ENST00000504788 NAA16Q6N069 864 aaPredicted RBP5.98□□□□□ -1.45
LMNB1-208ENST00000504788 ZC3H15Q8WU90 426 aaKnown RBP5.98□□□□□ -1.45
LMNB1-208ENST00000504788 FBXW7Q969H0 707 aa5.98□□□□□ -1.45
LMNB1-208ENST00000504788 TDRD3Q9H7E2 651 aaKnown RBP5.98□□□□□ -1.45
LMNB1-208ENST00000504788 AATFQ9NY61 560 aaKnown RBP eCLIP5.98□□□□□ -1.45
LMNB1-208ENST00000504788 RAI14Q9P0K7 980 aa5.98□□□□□ -1.45
LMNB1-208ENST00000504788 PASKQ96RG2 1323 aa5.98□□□□□ -1.45
LMNB1-208ENST00000504788 ATAD5Q96QE3 1844 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms