RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 EDC3Q96F86 508 aaKnown RBP18.9■□□□□ 0.62
CPNE1-228ENST00000498814 VEZTQ9HBM0 779 aa18.9■□□□□ 0.62
CPNE1-228ENST00000498814 HSPA6P17066 643 aa18.89■□□□□ 0.61
CPNE1-228ENST00000498814 FMR1Q06787 632 aaKnown RBP eCLIP18.89■□□□□ 0.61
CPNE1-228ENST00000498814 TNFAIP1Q13829 316 aa18.89■□□□□ 0.61
CPNE1-228ENST00000498814 CDC42EP5Q6NZY7 148 aa18.89■□□□□ 0.61
CPNE1-228ENST00000498814 DEFB129Q9H1M3 183 aa18.89■□□□□ 0.61
CPNE1-228ENST00000498814 TMOD2Q9NZR1 351 aa18.89■□□□□ 0.61
CPNE1-228ENST00000498814 SCAF8Q9UPN6 1271 aaKnown RBP18.89■□□□□ 0.61
CPNE1-228ENST00000498814 PPP2R3BQ9Y5P8 575 aa18.89■□□□□ 0.61
CPNE1-228ENST00000498814 MAP4K4O95819 1239 aaPredicted RBP18.88■□□□□ 0.61
CPNE1-228ENST00000498814 BTDP43251 543 aa18.88■□□□□ 0.61
CPNE1-228ENST00000498814 DLK2Q6UY11 383 aa18.88■□□□□ 0.61
CPNE1-228ENST00000498814 MAGEB6Q8N7X4 407 aa18.88■□□□□ 0.61
CPNE1-228ENST00000498814 CDCA5Q96FF9 252 aa18.88■□□□□ 0.61
CPNE1-228ENST00000498814 USP40Q9NVE5 1235 aa18.88■□□□□ 0.61
CPNE1-228ENST00000498814 CYP7A1P22680 504 aa18.87■□□□□ 0.61
CPNE1-228ENST00000498814 TNNI2P48788 182 aa18.87■□□□□ 0.61
CPNE1-228ENST00000498814 PPP4CP60510 307 aa18.87■□□□□ 0.61
CPNE1-228ENST00000498814 SLC9C2Q5TAH2 1124 aa18.87■□□□□ 0.61
CPNE1-228ENST00000498814 CENPQQ7L2Z9 268 aaPredicted RBP18.87■□□□□ 0.61
CPNE1-228ENST00000498814 ADGRA1Q86SQ6 560 aa18.87■□□□□ 0.61
CPNE1-228ENST00000498814 PLEKHM2Q8IWE5 1019 aa18.87■□□□□ 0.61
CPNE1-228ENST00000498814 CDK5RAP2Q96SN8 1893 aa18.87■□□□□ 0.61
CPNE1-228ENST00000498814 OSBPL3Q9H4L5 887 aa18.87■□□□□ 0.61
CPNE1-228ENST00000498814 TMEM88BA6NKF7 163 aa18.86■□□□□ 0.61
CPNE1-228ENST00000498814 TCP10L2B9ZVM9 353 aa18.86■□□□□ 0.61
CPNE1-228ENST00000498814 BAG3O95817 575 aa18.86■□□□□ 0.61
CPNE1-228ENST00000498814 PDE6AP16499 860 aa18.86■□□□□ 0.61
CPNE1-228ENST00000498814 CACNB3P54284 484 aa18.86■□□□□ 0.61
CPNE1-228ENST00000498814 RHBDL3P58872 404 aa18.86■□□□□ 0.61
CPNE1-228ENST00000498814 RASA3Q14644 834 aa18.86■□□□□ 0.61
CPNE1-228ENST00000498814 CST9Q5W186 159 aa18.86■□□□□ 0.61
CPNE1-228ENST00000498814 FAM83AQ86UY5 434 aa18.86■□□□□ 0.61
CPNE1-228ENST00000498814 KBTBD3Q8NAB2 608 aa18.86■□□□□ 0.61
CPNE1-228ENST00000498814 NOL10Q9BSC4 688 aaKnown RBP18.86■□□□□ 0.61
CPNE1-228ENST00000498814 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.86■□□□□ 0.612e-7■■■■■ 40.9
CPNE1-228ENST00000498814 CNTNAP1P78357 1384 aa18.85■□□□□ 0.61
CPNE1-228ENST00000498814 CELF2O95319 508 aaKnown RBP18.85■□□□□ 0.61
CPNE1-228ENST00000498814 PRAMEF18Q5VWM3 479 aa18.85■□□□□ 0.61
CPNE1-228ENST00000498814 CCDC136Q96JN2 1154 aa18.85■□□□□ 0.61
CPNE1-228ENST00000498814 IDI2Q9BXS1 227 aa18.85■□□□□ 0.61
CPNE1-228ENST00000498814 CREBZFQ9NS37 354 aa18.85■□□□□ 0.61
CPNE1-228ENST00000498814 FOCADQ5VW36 1801 aa18.85■□□□□ 0.61
CPNE1-228ENST00000498814 AK9Q5TCS8 1911 aa18.84■□□□□ 0.61
CPNE1-228ENST00000498814 RFX7Q2KHR2 1363 aa18.84■□□□□ 0.61
CPNE1-228ENST00000498814 TCRBV5S4A2TA0A5A2 114 aa18.84■□□□□ 0.61
CPNE1-228ENST00000498814 PLCG2P16885 1265 aa18.84■□□□□ 0.61
CPNE1-228ENST00000498814 PDE4AP27815 886 aa18.84■□□□□ 0.61
CPNE1-228ENST00000498814 ADD2P35612 726 aa18.84■□□□□ 0.61
CPNE1-228ENST00000498814 ZSCAN25Q6NSZ9 544 aa18.84■□□□□ 0.61
CPNE1-228ENST00000498814 CERS3Q8IU89 383 aa18.84■□□□□ 0.61
CPNE1-228ENST00000498814 AATFQ9NY61 560 aaKnown RBP eCLIP18.84■□□□□ 0.61
CPNE1-228ENST00000498814 ZNF532Q9HCE3 1301 aa18.83■□□□□ 0.61
CPNE1-228ENST00000498814 NPM3O75607 178 aaKnown RBP18.83■□□□□ 0.6
CPNE1-228ENST00000498814 WDHD1O75717 1129 aaPredicted RBP18.83■□□□□ 0.6
CPNE1-228ENST00000498814 NFIAQ12857 509 aa18.83■□□□□ 0.6
CPNE1-228ENST00000498814 UBE3CQ15386 1083 aa18.83■□□□□ 0.6
CPNE1-228ENST00000498814 FAM151AQ8WW52 585 aa18.83■□□□□ 0.6
CPNE1-228ENST00000498814 TEPSINQ96N21 525 aa18.83■□□□□ 0.6
CPNE1-228ENST00000498814 ZNF408Q9H9D4 720 aa18.83■□□□□ 0.6
CPNE1-228ENST00000498814 FAM198AQ9UFP1 575 aa18.83■□□□□ 0.6
CPNE1-228ENST00000498814 RPAP1Q9BWH6 1393 aaPredicted RBP18.82■□□□□ 0.6
CPNE1-228ENST00000498814 ENTPD3O75355 529 aa18.82■□□□□ 0.6
CPNE1-228ENST00000498814 NF2P35240 595 aa18.82■□□□□ 0.6
CPNE1-228ENST00000498814 SUPT20HL1Q3ZLR7 823 aa18.82■□□□□ 0.6
CPNE1-228ENST00000498814 SH3RF3Q8TEJ3 882 aaPredicted RBP18.82■□□□□ 0.6
CPNE1-228ENST00000498814 TMEM39BQ9GZU3 492 aa18.82■□□□□ 0.6
CPNE1-228ENST00000498814 PAPPA2Q9BXP8 1791 aa18.81■□□□□ 0.6
CPNE1-228ENST00000498814 ZFYP08048 801 aaPredicted RBP18.81■□□□□ 0.6
CPNE1-228ENST00000498814 RGS3P49796 1198 aa18.81■□□□□ 0.6
CPNE1-228ENST00000498814 DYNLL1P63167 89 aaKnown RBP18.81■□□□□ 0.6
CPNE1-228ENST00000498814 FKBP1BP68106 108 aa18.81■□□□□ 0.6
CPNE1-228ENST00000498814 LRRFIP1Q32MZ4 808 aaKnown RBP18.81■□□□□ 0.6
CPNE1-228ENST00000498814 NBPF12Q5TAG4 269 aaPredicted RBP18.81■□□□□ 0.6
CPNE1-228ENST00000498814 TEX11Q8IYF3 940 aa18.81■□□□□ 0.6
CPNE1-228ENST00000498814 C2orf69Q8N8R5 385 aa18.81■□□□□ 0.6
CPNE1-228ENST00000498814 MIGA1Q8NAN2 632 aa18.81■□□□□ 0.6
CPNE1-228ENST00000498814 EVI5LQ96CN4 794 aa18.81■□□□□ 0.6
CPNE1-228ENST00000498814 RIOK1Q9BRS2 568 aaKnown RBP18.81■□□□□ 0.6
CPNE1-228ENST00000498814 GBA2Q9HCG7 927 aaPredicted RBP18.81■□□□□ 0.6
CPNE1-228ENST00000498814 PPP4R2Q9NY27 417 aa18.81■□□□□ 0.6
CPNE1-228ENST00000498814 MAGEB6P1A0A0J9YX57 407 aa18.8■□□□□ 0.6
CPNE1-228ENST00000498814 TCP10Q12799 353 aa18.8■□□□□ 0.6
CPNE1-228ENST00000498814 DDX4Q9NQI0 724 aaKnown RBP18.8■□□□□ 0.6
CPNE1-228ENST00000498814 SSC5DA1L4H1 1573 aa18.8■□□□□ 0.6
CPNE1-228ENST00000498814 RNF113AO15541 343 aaKnown RBP18.79■□□□□ 0.6
CPNE1-228ENST00000498814 SAPCD2Q86UD0 394 aa18.79■□□□□ 0.6
CPNE1-228ENST00000498814 TICAM2Q86XR7 235 aa18.79■□□□□ 0.6
CPNE1-228ENST00000498814 FSD1Q9BTV5 496 aa18.79■□□□□ 0.6
CPNE1-228ENST00000498814 TLL2Q9Y6L7 1015 aa18.79■□□□□ 0.6
CPNE1-228ENST00000498814 MYH1P12882 1939 aa18.78■□□□□ 0.6
CPNE1-228ENST00000498814 COL2A1P02458 1487 aaPredicted RBP18.78■□□□□ 0.6
CPNE1-228ENST00000498814 CHGBP05060 677 aa18.78■□□□□ 0.6
CPNE1-228ENST00000498814 HTRA3P83110 453 aa18.78■□□□□ 0.6
CPNE1-228ENST00000498814 PICALMQ13492 652 aa18.78■□□□□ 0.6
CPNE1-228ENST00000498814 SLFNL1Q499Z3 407 aa18.78■□□□□ 0.6
CPNE1-228ENST00000498814 CDAN1Q8IWY9 1227 aa18.78■□□□□ 0.6
CPNE1-228ENST00000498814 ZFPM1Q8IX07 1006 aa18.78■□□□□ 0.6
CPNE1-228ENST00000498814 HOOK2Q96ED9 719 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms