RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 NBPF20Q3BBV1 942 aa13.54□□□□□ -0.24
SNRNP200-208ENST00000497539 WWC3Q9ULE0 1092 aa13.54□□□□□ -0.24
SNRNP200-208ENST00000497539 GNAT2P19087 354 aa13.53□□□□□ -0.24
SNRNP200-208ENST00000497539 TPTE2Q6XPS3 522 aa13.53□□□□□ -0.24
SNRNP200-208ENST00000497539 TCEANC2Q96MN5 208 aa13.53□□□□□ -0.24
SNRNP200-208ENST00000497539 ANKRD2Q9GZV1 360 aa13.53□□□□□ -0.24
SNRNP200-208ENST00000497539 SRP68Q9UHB9 627 aaKnown RBP13.53□□□□□ -0.24
SNRNP200-208ENST00000497539 MINPP1Q9UNW1 487 aa13.53□□□□□ -0.24
SNRNP200-208ENST00000497539 IRS2Q9Y4H2 1338 aa13.53□□□□□ -0.24
SNRNP200-208ENST00000497539 FIBPO43427 364 aa13.53□□□□□ -0.24
SNRNP200-208ENST00000497539 TTLL5Q6EMB2 1281 aa13.53□□□□□ -0.24
SNRNP200-208ENST00000497539 BRF1Q92994 677 aa13.53□□□□□ -0.24
SNRNP200-208ENST00000497539 NBPF3Q9H094 633 aa13.53□□□□□ -0.24
SNRNP200-208ENST00000497539 CGNQ9P2M7 1197 aaKnown RBP13.53□□□□□ -0.24
SNRNP200-208ENST00000497539 NRXN2Q9P2S2 1712 aa13.52□□□□□ -0.24
SNRNP200-208ENST00000497539 A0A0G2JLW4 131 aa13.52□□□□□ -0.24
SNRNP200-208ENST00000497539 TM4SF1P30408 202 aa13.52□□□□□ -0.24
SNRNP200-208ENST00000497539 HMGN5P82970 282 aaKnown RBP13.52□□□□□ -0.24
SNRNP200-208ENST00000497539 GIMAP6Q6P9H5 292 aa13.52□□□□□ -0.24
SNRNP200-208ENST00000497539 NBPF5PQ86XG9 351 aaPredicted RBP13.52□□□□□ -0.24
SNRNP200-208ENST00000497539 NCOA7Q8NI08 942 aa13.52□□□□□ -0.24
SNRNP200-208ENST00000497539 NLRP3Q96P20 1036 aa13.52□□□□□ -0.24
SNRNP200-208ENST00000497539 GNL3LQ9NVN8 582 aaKnown RBP13.52□□□□□ -0.24
SNRNP200-208ENST00000497539 IDH1O75874 414 aaKnown RBP13.52□□□□□ -0.25
SNRNP200-208ENST00000497539 SCRN1Q12765 414 aa13.52□□□□□ -0.25
SNRNP200-208ENST00000497539 LARP1BQ659C4 914 aaKnown RBP13.52□□□□□ -0.25
SNRNP200-208ENST00000497539 FAM196AQ6ZSG2 479 aa13.52□□□□□ -0.25
SNRNP200-208ENST00000497539 FBXO33Q7Z6M2 555 aa13.52□□□□□ -0.25
SNRNP200-208ENST00000497539 AMIGO3Q86WK7 504 aa13.52□□□□□ -0.25
SNRNP200-208ENST00000497539 ZNF710Q8N1W2 664 aa13.52□□□□□ -0.25
SNRNP200-208ENST00000497539 MYRIPQ8NFW9 859 aa13.52□□□□□ -0.25
SNRNP200-208ENST00000497539 ELP1O95163 1332 aa13.52□□□□□ -0.25
SNRNP200-208ENST00000497539 NID2Q14112 1375 aa13.52□□□□□ -0.25
SNRNP200-208ENST00000497539 TCHHQ07283 1943 aa13.51□□□□□ -0.25
SNRNP200-208ENST00000497539 ZNF213O14771 459 aa13.51□□□□□ -0.25
SNRNP200-208ENST00000497539 BCAMP50895 628 aa13.51□□□□□ -0.25
SNRNP200-208ENST00000497539 KCNQ4P56696 695 aa13.51□□□□□ -0.25
SNRNP200-208ENST00000497539 TRAPPC3LQ5T215 181 aa13.51□□□□□ -0.25
SNRNP200-208ENST00000497539 KCNA4P22459 653 aa13.51□□□□□ -0.25
SNRNP200-208ENST00000497539 SETQ01105 290 aaPredicted RBP13.51□□□□□ -0.25
SNRNP200-208ENST00000497539 NAA16Q6N069 864 aaPredicted RBP13.51□□□□□ -0.25
SNRNP200-208ENST00000497539 NSUN7Q8NE18 718 aaKnown RBP13.51□□□□□ -0.25
SNRNP200-208ENST00000497539 PIBF1Q8WXW3 757 aa13.51□□□□□ -0.25
SNRNP200-208ENST00000497539 MTA3Q9BTC8 594 aa13.51□□□□□ -0.25
SNRNP200-208ENST00000497539 LAMB1P07942 1786 aa13.5□□□□□ -0.25
SNRNP200-208ENST00000497539 PDIA3P30101 505 aaKnown RBP13.5□□□□□ -0.25
SNRNP200-208ENST00000497539 ANTXR2P58335 489 aa13.5□□□□□ -0.25
SNRNP200-208ENST00000497539 RPS8P62241 208 aaKnown RBP13.5□□□□□ -0.25
SNRNP200-208ENST00000497539 CBX1P83916 185 aa13.5□□□□□ -0.25
SNRNP200-208ENST00000497539 SPC24Q8NBT2 197 aa13.5□□□□□ -0.25
SNRNP200-208ENST00000497539 CELF1Q92879 486 aaKnown RBP13.5□□□□□ -0.25
SNRNP200-208ENST00000497539 DENND2AQ9ULE3 1009 aa13.5□□□□□ -0.25
SNRNP200-208ENST00000497539 KIF3AQ9Y496 699 aa13.5□□□□□ -0.25
SNRNP200-208ENST00000497539 LTBP1Q14766 1721 aa13.5□□□□□ -0.25
SNRNP200-208ENST00000497539 AP5Z1O43299 807 aa13.5□□□□□ -0.25
SNRNP200-208ENST00000497539 UBE2HP62256 183 aa13.5□□□□□ -0.25
SNRNP200-208ENST00000497539 CCDC183Q5T5S1 534 aa13.5□□□□□ -0.25
SNRNP200-208ENST00000497539 C15orf52Q6ZUT6 534 aaKnown RBP13.5□□□□□ -0.25
SNRNP200-208ENST00000497539 LRRC4BQ9NT99 713 aa13.5□□□□□ -0.25
SNRNP200-208ENST00000497539 DLEC1Q9Y238 1755 aa13.5□□□□□ -0.25
SNRNP200-208ENST00000497539 CTDNEP1O95476 244 aa13.49□□□□□ -0.25
SNRNP200-208ENST00000497539 MAGEB6Q8N7X4 407 aa13.49□□□□□ -0.25
SNRNP200-208ENST00000497539 AIDAQ96BJ3 306 aa13.49□□□□□ -0.25
SNRNP200-208ENST00000497539 PRC1O43663 620 aa13.49□□□□□ -0.25
SNRNP200-208ENST00000497539 RFC4P35249 363 aa13.49□□□□□ -0.25
SNRNP200-208ENST00000497539 QTRT2Q9H974 415 aaKnown RBP13.49□□□□□ -0.25
SNRNP200-208ENST00000497539 EPB41L4AQ9HCS5 686 aaPredicted RBP13.49□□□□□ -0.25
SNRNP200-208ENST00000497539 CCDC88AQ3V6T2 1871 aa13.49□□□□□ -0.25
SNRNP200-208ENST00000497539 APOBRQ0VD83 1088 aa13.48□□□□□ -0.25
SNRNP200-208ENST00000497539 CAVIN4Q5BKX8 364 aa13.48□□□□□ -0.25
SNRNP200-208ENST00000497539 CDC37L1Q7L3B6 337 aa13.48□□□□□ -0.25
SNRNP200-208ENST00000497539 TBC1D10CQ8IV04 446 aa13.48□□□□□ -0.25
SNRNP200-208ENST00000497539 FAM84BQ96KN1 310 aaPredicted RBP13.48□□□□□ -0.25
SNRNP200-208ENST00000497539 ZSCAN16Q9H4T2 348 aaPredicted RBP13.48□□□□□ -0.25
SNRNP200-208ENST00000497539 ECM29Q5VYK3 1845 aa13.48□□□□□ -0.25
SNRNP200-208ENST00000497539 SNAP23O00161 211 aa13.48□□□□□ -0.25
SNRNP200-208ENST00000497539 MBD4O95243 580 aa13.48□□□□□ -0.25
SNRNP200-208ENST00000497539 RESTQ13127 1097 aa13.48□□□□□ -0.25
SNRNP200-208ENST00000497539 NFIXQ14938 502 aa13.48□□□□□ -0.25
SNRNP200-208ENST00000497539 BICDL1Q6ZP65 573 aa13.48□□□□□ -0.25
SNRNP200-208ENST00000497539 IFNL3Q8IZI9 196 aa13.48□□□□□ -0.25
SNRNP200-208ENST00000497539 GSG1L2A8MUP6 293 aa13.47□□□□□ -0.25
SNRNP200-208ENST00000497539 KDM4AO75164 1064 aa13.47□□□□□ -0.25
SNRNP200-208ENST00000497539 DNM1Q05193 864 aaKnown RBP13.47□□□□□ -0.25
SNRNP200-208ENST00000497539 CRY2Q49AN0 593 aa13.47□□□□□ -0.25
SNRNP200-208ENST00000497539 RALYLQ86SE5 291 aaKnown RBP13.47□□□□□ -0.25
SNRNP200-208ENST00000497539 TMEM87BQ96K49 555 aa13.47□□□□□ -0.25
SNRNP200-208ENST00000497539 ANAPC4Q9UJX5 808 aa13.47□□□□□ -0.25
SNRNP200-208ENST00000497539 SH2B2O14492 632 aaPredicted RBP13.47□□□□□ -0.25
SNRNP200-208ENST00000497539 JAK2O60674 1132 aa13.47□□□□□ -0.25
SNRNP200-208ENST00000497539 STK3Q13188 491 aa13.47□□□□□ -0.25
SNRNP200-208ENST00000497539 UVSSAQ2YD98 709 aa13.47□□□□□ -0.25
SNRNP200-208ENST00000497539 FAM182BQ5T319 152 aa13.47□□□□□ -0.25
SNRNP200-208ENST00000497539 ATL3Q6DD88 541 aa13.47□□□□□ -0.25
SNRNP200-208ENST00000497539 FAM184AQ8NB25 1140 aa13.47□□□□□ -0.25
SNRNP200-208ENST00000497539 CNNM2Q9H8M5 875 aa13.47□□□□□ -0.25
SNRNP200-208ENST00000497539 PYCARDQ9ULZ3 195 aa13.47□□□□□ -0.25
SNRNP200-208ENST00000497539 HPS5Q9UPZ3 1129 aa13.47□□□□□ -0.25
SNRNP200-208ENST00000497539 PTPDC1A2A3K4 754 aa13.47□□□□□ -0.25
SNRNP200-208ENST00000497539 VPS37CA5D8V6 355 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms