RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 ZNF213O14771 459 aa20.08■□□□□ 0.8
LMNA-216ENST00000496738 GSTO1P78417 241 aa20.08■□□□□ 0.8
LMNA-216ENST00000496738 TTC14Q96N46 770 aa20.08■□□□□ 0.8
LMNA-216ENST00000496738 NEK1Q96PY6 1258 aa20.08■□□□□ 0.8
LMNA-216ENST00000496738 AK2P54819 239 aa20.07■□□□□ 0.8
LMNA-216ENST00000496738 KRT32Q14532 448 aa20.07■□□□□ 0.8
LMNA-216ENST00000496738 PSMD1Q99460 953 aa20.07■□□□□ 0.8
LMNA-216ENST00000496738 NBPF3Q9H094 633 aa20.07■□□□□ 0.8
LMNA-216ENST00000496738 SCN9AQ15858 1988 aa20.07■□□□□ 0.8
LMNA-216ENST00000496738 STK11IPQ8N1F8 1099 aa20.07■□□□□ 0.8
LMNA-216ENST00000496738 MROH7-TTC4A0A0A0MT08 1334 aa20.07■□□□□ 0.8
LMNA-216ENST00000496738 LARGE2Q8N3Y3 721 aa20.06■□□□□ 0.8
LMNA-216ENST00000496738 NACAP1Q9BZK3 213 aa20.06■□□□□ 0.8
LMNA-216ENST00000496738 COL4A5P29400 1685 aa20.06■□□□□ 0.8
LMNA-216ENST00000496738 MYH2Q9UKX2 1941 aa20.06■□□□□ 0.8
LMNA-216ENST00000496738 YDJCA8MPS7 323 aa20.06■□□□□ 0.8
LMNA-216ENST00000496738 HSP90AA1P07900 732 aaKnown RBP20.06■□□□□ 0.8
LMNA-216ENST00000496738 RPS6KB1P23443 525 aa20.06■□□□□ 0.8
LMNA-216ENST00000496738 SCNN1DP51172 638 aa20.06■□□□□ 0.8
LMNA-216ENST00000496738 GRIPAP1Q4V328 841 aa20.06■□□□□ 0.8
LMNA-216ENST00000496738 TBC1D10CQ8IV04 446 aa20.06■□□□□ 0.8
LMNA-216ENST00000496738 SH3RF3Q8TEJ3 882 aaPredicted RBP20.06■□□□□ 0.8
LMNA-216ENST00000496738 CTDSPL2Q05D32 466 aa20.05■□□□□ 0.8
LMNA-216ENST00000496738 SOGA3Q5TF21 947 aa20.05■□□□□ 0.8
LMNA-216ENST00000496738 TTF2Q9UNY4 1162 aaKnown RBP20.05■□□□□ 0.8
LMNA-216ENST00000496738 LAMA4Q16363 1823 aa20.05■□□□□ 0.8
LMNA-216ENST00000496738 BTDP43251 543 aa20.05■□□□□ 0.8
LMNA-216ENST00000496738 ALX1Q15699 326 aa20.05■□□□□ 0.8
LMNA-216ENST00000496738 LRRC2Q9BYS8 371 aa20.05■□□□□ 0.8
LMNA-216ENST00000496738 ADAMTSL1Q8N6G6 1762 aa20.04■□□□□ 0.8
LMNA-216ENST00000496738 LDHCP07864 332 aa20.04■□□□□ 0.8
LMNA-216ENST00000496738 CHST3Q7LGC8 479 aa20.04■□□□□ 0.8
LMNA-216ENST00000496738 NOL10Q9BSC4 688 aaKnown RBP20.04■□□□□ 0.8
LMNA-216ENST00000496738 CRNKL1Q9BZJ0 848 aaKnown RBP20.04■□□□□ 0.8
LMNA-216ENST00000496738 INCENPQ9NQS7 918 aa20.04■□□□□ 0.8
LMNA-216ENST00000496738 USP17L3A6NCW0 530 aa20.04■□□□□ 0.8
LMNA-216ENST00000496738 USP17L4A6NCW7 530 aa20.04■□□□□ 0.8
LMNA-216ENST00000496738 SMIM22K7EJ46 135 aa20.04■□□□□ 0.8
LMNA-216ENST00000496738 USP17L1Q7RTZ2 530 aa20.04■□□□□ 0.8
LMNA-216ENST00000496738 KIAA0825Q8IV33 1275 aa20.04■□□□□ 0.8
LMNA-216ENST00000496738 CYP2D7A0A087X1C5 515 aa20.03■□□□□ 0.8
LMNA-216ENST00000496738 MINDY4BA8MYZ0 360 aa20.03■□□□□ 0.8
LMNA-216ENST00000496738 SLC4A8Q2Y0W8 1093 aa20.03■□□□□ 0.8
LMNA-216ENST00000496738 DACT2Q5SW24 774 aa20.03■□□□□ 0.8
LMNA-216ENST00000496738 STRIP1Q5VSL9 837 aa20.03■□□□□ 0.8
LMNA-216ENST00000496738 TMX3Q96JJ7 454 aa20.03■□□□□ 0.8
LMNA-216ENST00000496738 ZMYM6O95789 1325 aa20.03■□□□□ 0.8
LMNA-216ENST00000496738 BAG3O95817 575 aa20.03■□□□□ 0.8
LMNA-216ENST00000496738 FHDC1Q9C0D6 1143 aaPredicted RBP20.03■□□□□ 0.8
LMNA-216ENST00000496738 TAOK3Q9H2K8 898 aa20.03■□□□□ 0.8
LMNA-216ENST00000496738 BAZ2AQ9UIF9 1905 aaKnown RBP20.02■□□□□ 0.8
LMNA-216ENST00000496738 ZNF646O15015 1829 aaPredicted RBP20.02■□□□□ 0.8
LMNA-216ENST00000496738 RAD17O75943 681 aa20.02■□□□□ 0.8
LMNA-216ENST00000496738 TMED8Q6PL24 325 aaPredicted RBP20.02■□□□□ 0.8
LMNA-216ENST00000496738 DAGLAQ9Y4D2 1042 aa20.02■□□□□ 0.8
LMNA-216ENST00000496738 NFKBIEO00221 500 aa20.02■□□□□ 0.79
LMNA-216ENST00000496738 IARSP41252 1262 aaKnown RBP20.02■□□□□ 0.79
LMNA-216ENST00000496738 MCM2P49736 904 aa20.02■□□□□ 0.79
LMNA-216ENST00000496738 EVX2Q03828 476 aa20.02■□□□□ 0.79
LMNA-216ENST00000496738 NKX2-3Q8TAU0 364 aa20.02■□□□□ 0.79
LMNA-216ENST00000496738 USP5P45974 858 aa20.01■□□□□ 0.79
LMNA-216ENST00000496738 DCP1AQ9NPI6 582 aaPredicted RBP20.01■□□□□ 0.79
LMNA-216ENST00000496738 TACC3Q9Y6A5 838 aa20.01■□□□□ 0.79
LMNA-216ENST00000496738 NEDD4P46934 1319 aa20.01■□□□□ 0.79
LMNA-216ENST00000496738 GPR75-ASB3A0A0A6YYF3 556 aa20.01■□□□□ 0.79
LMNA-216ENST00000496738 RASSF7Q02833 373 aa20.01■□□□□ 0.79
LMNA-216ENST00000496738 PPARAQ07869 468 aa20.01■□□□□ 0.79
LMNA-216ENST00000496738 SLF2Q8IX21 1173 aa20.01■□□□□ 0.79
LMNA-216ENST00000496738 TGFBRAP1Q8WUH2 860 aa20.01■□□□□ 0.79
LMNA-216ENST00000496738 FER1L6Q2WGJ9 1857 aa20■□□□□ 0.79
LMNA-216ENST00000496738 IGSF3O75054 1194 aa20■□□□□ 0.79
LMNA-216ENST00000496738 LARGE1O95461 756 aa20■□□□□ 0.79
LMNA-216ENST00000496738 TOB2Q14106 344 aaPredicted RBP20■□□□□ 0.79
LMNA-216ENST00000496738 Q6ZUG5 572 aa20■□□□□ 0.79
LMNA-216ENST00000496738 DHX32Q7L7V1 743 aaKnown RBP20■□□□□ 0.79
LMNA-216ENST00000496738 RALYLQ86SE5 291 aaKnown RBP20■□□□□ 0.79
LMNA-216ENST00000496738 NIM1KQ8IY84 436 aa20■□□□□ 0.79
LMNA-216ENST00000496738 SUGT1Q9Y2Z0 365 aa20■□□□□ 0.79
LMNA-216ENST00000496738 GAKO14976 1311 aa20■□□□□ 0.79
LMNA-216ENST00000496738 CYP2D6P10635 497 aa20■□□□□ 0.79
LMNA-216ENST00000496738 CTR9Q6PD62 1173 aa20■□□□□ 0.79
LMNA-216ENST00000496738 NCOA7Q8NI08 942 aa20■□□□□ 0.79
LMNA-216ENST00000496738 PCDHAC2Q9Y5I4 1007 aa20■□□□□ 0.79
LMNA-216ENST00000496738 USP17L12C9JPN9 530 aa19.99■□□□□ 0.79
LMNA-216ENST00000496738 USP17L21D6R901 530 aa19.99■□□□□ 0.79
LMNA-216ENST00000496738 PPP4CP60510 307 aa19.99■□□□□ 0.79
LMNA-216ENST00000496738 FGD1P98174 961 aa19.99■□□□□ 0.79
LMNA-216ENST00000496738 MAPKAPK5Q8IW41 473 aa19.99■□□□□ 0.79
LMNA-216ENST00000496738 TOMM22Q9NS69 142 aa19.99■□□□□ 0.79
LMNA-216ENST00000496738 LIMCH1Q9UPQ0 1083 aa19.99■□□□□ 0.79
LMNA-216ENST00000496738 HMGB1P09429 215 aaKnown RBP19.98■□□□□ 0.79
LMNA-216ENST00000496738 RRP12Q5JTH9 1297 aaKnown RBP19.98■□□□□ 0.79
LMNA-216ENST00000496738 TEX11Q8IYF3 940 aa19.98■□□□□ 0.79
LMNA-216ENST00000496738 MCM9Q9NXL9 1143 aa19.98■□□□□ 0.79
LMNA-216ENST00000496738 B4E1Z4 1266 aa19.98■□□□□ 0.79
LMNA-216ENST00000496738 USP17L8P0C7I0 530 aa19.98■□□□□ 0.79
LMNA-216ENST00000496738 MB21D2Q8IYB1 491 aaPredicted RBP19.98■□□□□ 0.79
LMNA-216ENST00000496738 FAM163AQ96GL9 167 aaPredicted RBP19.98■□□□□ 0.79
LMNA-216ENST00000496738 ATP8A2Q9NTI2 1148 aa19.98■□□□□ 0.79
LMNA-216ENST00000496738 TPCN1Q9ULQ1 816 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms