RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 LDHCP07864 332 aa23.62■■□□□ 1.37
HDAC4-212ENST00000495497 CST9Q5W186 159 aa23.62■■□□□ 1.37
HDAC4-212ENST00000495497 MAGEB6Q8N7X4 407 aa23.62■■□□□ 1.37
HDAC4-212ENST00000495497 DEFB129Q9H1M3 183 aa23.62■■□□□ 1.37
HDAC4-212ENST00000495497 GPR75-ASB3A0A0A6YYF3 556 aa23.61■■□□□ 1.37
HDAC4-212ENST00000495497 PDE1AP54750 535 aa23.61■■□□□ 1.37
HDAC4-212ENST00000495497 MAP3K12Q12852 859 aa23.61■■□□□ 1.37
HDAC4-212ENST00000495497 STAP2Q9UGK3 403 aa23.61■■□□□ 1.37
HDAC4-212ENST00000495497 MYO5AQ9Y4I1 1855 aaKnown RBP23.6■■□□□ 1.37
HDAC4-212ENST00000495497 ERC2O15083 957 aa23.6■■□□□ 1.37
HDAC4-212ENST00000495497 CYP7A1P22680 504 aa23.6■■□□□ 1.37
HDAC4-212ENST00000495497 RASA3Q14644 834 aa23.6■■□□□ 1.37
HDAC4-212ENST00000495497 MYH2Q9UKX2 1941 aa23.59■■□□□ 1.37
HDAC4-212ENST00000495497 GLRX3O76003 335 aaKnown RBP23.59■■□□□ 1.37
HDAC4-212ENST00000495497 CHGBP05060 677 aa23.59■■□□□ 1.37
HDAC4-212ENST00000495497 PDE4AP27815 886 aa23.59■■□□□ 1.37
HDAC4-212ENST00000495497 NFIAQ12857 509 aa23.59■■□□□ 1.37
HDAC4-212ENST00000495497 SLFNL1Q499Z3 407 aa23.59■■□□□ 1.37
HDAC4-212ENST00000495497 PLEKHM2Q8IWE5 1019 aa23.59■■□□□ 1.37
HDAC4-212ENST00000495497 AATFQ9NY61 560 aaKnown RBP eCLIP23.59■■□□□ 1.37
HDAC4-212ENST00000495497 TMOD2Q9NZR1 351 aa23.59■■□□□ 1.37
HDAC4-212ENST00000495497 CNTNAP1P78357 1384 aa23.58■■□□□ 1.37
HDAC4-212ENST00000495497 TMEM88BA6NKF7 163 aa23.58■■□□□ 1.37
HDAC4-212ENST00000495497 PDE6AP16499 860 aa23.58■■□□□ 1.37
HDAC4-212ENST00000495497 SLC9C2Q5TAH2 1124 aa23.58■■□□□ 1.37
HDAC4-212ENST00000495497 CDAN1Q8IWY9 1227 aa23.58■■□□□ 1.37
HDAC4-212ENST00000495497 TMEM39BQ9GZU3 492 aa23.58■■□□□ 1.37
HDAC4-212ENST00000495497 RHBDL3P58872 404 aa23.57■■□□□ 1.36
HDAC4-212ENST00000495497 DYNLL1P63167 89 aaKnown RBP23.57■■□□□ 1.36
HDAC4-212ENST00000495497 MIGA1Q8NAN2 632 aa23.57■■□□□ 1.36
HDAC4-212ENST00000495497 ECM29Q5VYK3 1845 aa23.56■■□□□ 1.36
HDAC4-212ENST00000495497 TNNI2P48788 182 aa23.56■■□□□ 1.36
HDAC4-212ENST00000495497 TCP10Q12799 353 aa23.56■■□□□ 1.36
HDAC4-212ENST00000495497 TNFAIP1Q13829 316 aa23.56■■□□□ 1.36
HDAC4-212ENST00000495497 SH3RF3Q8TEJ3 882 aaPredicted RBP23.56■■□□□ 1.36
HDAC4-212ENST00000495497 NOL10Q9BSC4 688 aaKnown RBP23.56■■□□□ 1.36
HDAC4-212ENST00000495497 FAM198AQ9UFP1 575 aa23.56■■□□□ 1.36
HDAC4-212ENST00000495497 ZNF532Q9HCE3 1301 aa23.56■■□□□ 1.36
HDAC4-212ENST00000495497 MAST2Q6P0Q8 1798 aa23.55■■□□□ 1.36
HDAC4-212ENST00000495497 TCRBV5S4A2TA0A5A2 114 aa23.55■■□□□ 1.36
HDAC4-212ENST00000495497 IGSF3O75054 1194 aa23.55■■□□□ 1.36
HDAC4-212ENST00000495497 NBPF12Q5TAG4 269 aaPredicted RBP23.55■■□□□ 1.36
HDAC4-212ENST00000495497 ZFPM1Q8IX07 1006 aa23.55■■□□□ 1.36
HDAC4-212ENST00000495497 CCDC136Q96JN2 1154 aa23.55■■□□□ 1.36
HDAC4-212ENST00000495497 DDX4Q9NQI0 724 aaKnown RBP23.55■■□□□ 1.36
HDAC4-212ENST00000495497 CREBZFQ9NS37 354 aa23.55■■□□□ 1.36
HDAC4-212ENST00000495497 FZD1Q9UP38 647 aa23.55■■□□□ 1.36
HDAC4-212ENST00000495497 PPP2R3BQ9Y5P8 575 aa23.55■■□□□ 1.36
HDAC4-212ENST00000495497 DOCK2Q92608 1830 aa23.54■■□□□ 1.36
HDAC4-212ENST00000495497 WDHD1O75717 1129 aaPredicted RBP23.54■■□□□ 1.36
HDAC4-212ENST00000495497 BAG3O95817 575 aa23.54■■□□□ 1.36
HDAC4-212ENST00000495497 ADD2P35612 726 aa23.54■■□□□ 1.36
HDAC4-212ENST00000495497 RGS3P49796 1198 aa23.54■■□□□ 1.36
HDAC4-212ENST00000495497 PICALMQ13492 652 aa23.54■■□□□ 1.36
HDAC4-212ENST00000495497 PRKG1Q13976 671 aa23.54■■□□□ 1.36
HDAC4-212ENST00000495497 FKBP1CQ5VVH2 108 aa23.54■■□□□ 1.36
HDAC4-212ENST00000495497 MOB2Q70IA6 237 aa23.54■■□□□ 1.36
HDAC4-212ENST00000495497 KBTBD3Q8NAB2 608 aa23.54■■□□□ 1.36
HDAC4-212ENST00000495497 TEPSINQ96N21 525 aa23.54■■□□□ 1.36
HDAC4-212ENST00000495497 PPP4CP60510 307 aa23.53■■□□□ 1.36
HDAC4-212ENST00000495497 CENPQQ7L2Z9 268 aaPredicted RBP23.53■■□□□ 1.36
HDAC4-212ENST00000495497 FAM83AQ86UY5 434 aa23.53■■□□□ 1.36
HDAC4-212ENST00000495497 TEX11Q8IYF3 940 aa23.53■■□□□ 1.36
HDAC4-212ENST00000495497 IDI2Q9BXS1 227 aa23.53■■□□□ 1.36
HDAC4-212ENST00000495497 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.53■■□□□ 1.36
HDAC4-212ENST00000495497 GBA2Q9HCG7 927 aaPredicted RBP23.53■■□□□ 1.36
HDAC4-212ENST00000495497 ABT1Q9ULW3 272 aaKnown RBP23.53■■□□□ 1.36
HDAC4-212ENST00000495497 FAM151AQ8WW52 585 aa23.52■■□□□ 1.36
HDAC4-212ENST00000495497 RFX7Q2KHR2 1363 aa23.52■■□□□ 1.36
HDAC4-212ENST00000495497 SKAP1Q86WV1 359 aa23.51■■□□□ 1.35
HDAC4-212ENST00000495497 C2orf69Q8N8R5 385 aa23.51■■□□□ 1.35
HDAC4-212ENST00000495497 OSBPL3Q9H4L5 887 aa23.51■■□□□ 1.35
HDAC4-212ENST00000495497 SSC5DA1L4H1 1573 aa23.51■■□□□ 1.35
HDAC4-212ENST00000495497 MAGEB6P1A0A0J9YX57 407 aa23.5■■□□□ 1.35
HDAC4-212ENST00000495497 NF2P35240 595 aa23.5■■□□□ 1.35
HDAC4-212ENST00000495497 TTLL12Q14166 644 aaPredicted RBP23.5■■□□□ 1.35
HDAC4-212ENST00000495497 RIOK1Q9BRS2 568 aaKnown RBP23.5■■□□□ 1.35
HDAC4-212ENST00000495497 FSD1Q9BTV5 496 aa23.5■■□□□ 1.35
HDAC4-212ENST00000495497 TLL2Q9Y6L7 1015 aa23.5■■□□□ 1.35
HDAC4-212ENST00000495497 TRPM7Q96QT4 1865 aa23.49■■□□□ 1.35
HDAC4-212ENST00000495497 ENTPD3O75355 529 aa23.49■■□□□ 1.35
HDAC4-212ENST00000495497 UBE3CQ15386 1083 aa23.49■■□□□ 1.35
HDAC4-212ENST00000495497 SUPT20HL1Q3ZLR7 823 aa23.49■■□□□ 1.35
HDAC4-212ENST00000495497 ZSCAN25Q6NSZ9 544 aa23.49■■□□□ 1.35
HDAC4-212ENST00000495497 TMED8Q6PL24 325 aaPredicted RBP23.49■■□□□ 1.35
HDAC4-212ENST00000495497 SH3BP5LQ7L8J4 393 aa23.49■■□□□ 1.35
HDAC4-212ENST00000495497 SAPCD2Q86UD0 394 aa23.49■■□□□ 1.35
HDAC4-212ENST00000495497 TGFBRAP1Q8WUH2 860 aa23.49■■□□□ 1.35
HDAC4-212ENST00000495497 TRIM6-TRIM34B2RNG4 842 aa23.48■■□□□ 1.35
HDAC4-212ENST00000495497 RNF113AO15541 343 aaKnown RBP23.48■■□□□ 1.35
HDAC4-212ENST00000495497 PLCG2P16885 1265 aa23.48■■□□□ 1.35
HDAC4-212ENST00000495497 MAPKAPK5Q8IW41 473 aa23.48■■□□□ 1.35
HDAC4-212ENST00000495497 LCORLQ8N3X6 602 aa23.48■■□□□ 1.35
HDAC4-212ENST00000495497 PUS7LQ9H0K6 701 aaKnown RBP23.48■■□□□ 1.35
HDAC4-212ENST00000495497 ARMT1Q9H993 441 aa23.48■■□□□ 1.35
HDAC4-212ENST00000495497 MKRN1Q9UHC7 482 aaKnown RBP23.48■■□□□ 1.35
HDAC4-212ENST00000495497 DDTLA6NHG4 134 aaPredicted RBP23.47■■□□□ 1.35
HDAC4-212ENST00000495497 UBE2Q2LH0YL09 131 aa23.47■■□□□ 1.35
HDAC4-212ENST00000495497 HUNKP57058 714 aa23.47■■□□□ 1.35
HDAC4-212ENST00000495497 RILPL2Q969X0 211 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms