RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 PAG1Q9NWQ8 432 aa16.48■□□□□ 0.23
COL1A1-208ENST00000494334 TTC41PQ6P2S7 1318 aa16.47■□□□□ 0.23
COL1A1-208ENST00000494334 MX1P20591 662 aa16.47■□□□□ 0.23
COL1A1-208ENST00000494334 NUCB1Q02818 461 aa16.47■□□□□ 0.23
COL1A1-208ENST00000494334 MAP3K12Q12852 859 aa16.47■□□□□ 0.23
COL1A1-208ENST00000494334 CHD1LQ86WJ1 897 aa16.47■□□□□ 0.23
COL1A1-208ENST00000494334 TMOD2Q9NZR1 351 aa16.47■□□□□ 0.23
COL1A1-208ENST00000494334 PPP2R3BQ9Y5P8 575 aa16.47■□□□□ 0.23
COL1A1-208ENST00000494334 TNNI2P48788 182 aa16.46■□□□□ 0.23
COL1A1-208ENST00000494334 NFIAQ12857 509 aa16.46■□□□□ 0.23
COL1A1-208ENST00000494334 FKBP1CQ5VVH2 108 aa16.46■□□□□ 0.23
COL1A1-208ENST00000494334 ADGRA1Q86SQ6 560 aa16.46■□□□□ 0.23
COL1A1-208ENST00000494334 MAGEB6Q8N7X4 407 aa16.46■□□□□ 0.23
COL1A1-208ENST00000494334 PI4K2BQ8TCG2 481 aa16.46■□□□□ 0.23
COL1A1-208ENST00000494334 GBA2Q9HCG7 927 aaPredicted RBP16.46■□□□□ 0.23
COL1A1-208ENST00000494334 ERC2O15083 957 aa16.45■□□□□ 0.22
COL1A1-208ENST00000494334 CYP7A1P22680 504 aa16.45■□□□□ 0.22
COL1A1-208ENST00000494334 RHBDL3P58872 404 aa16.45■□□□□ 0.22
COL1A1-208ENST00000494334 NBPF12Q5TAG4 269 aaPredicted RBP16.45■□□□□ 0.22
COL1A1-208ENST00000494334 FAM83AQ86UY5 434 aa16.45■□□□□ 0.22
COL1A1-208ENST00000494334 TEPSINQ96N21 525 aa16.45■□□□□ 0.22
COL1A1-208ENST00000494334 TMEM39BQ9GZU3 492 aa16.45■□□□□ 0.22
COL1A1-208ENST00000494334 ABT1Q9ULW3 272 aaKnown RBP16.45■□□□□ 0.22
COL1A1-208ENST00000494334 TLL2Q9Y6L7 1015 aa16.45■□□□□ 0.22
COL1A1-208ENST00000494334 CNTNAP1P78357 1384 aa16.45■□□□□ 0.22
COL1A1-208ENST00000494334 GLRX3O76003 335 aaKnown RBP16.44■□□□□ 0.22
COL1A1-208ENST00000494334 PDE1AP54750 535 aa16.44■□□□□ 0.22
COL1A1-208ENST00000494334 PPP4CP60510 307 aa16.44■□□□□ 0.22
COL1A1-208ENST00000494334 SLC9C2Q5TAH2 1124 aa16.44■□□□□ 0.22
COL1A1-208ENST00000494334 SAPCD2Q86UD0 394 aa16.44■□□□□ 0.22
COL1A1-208ENST00000494334 CDAN1Q8IWY9 1227 aa16.44■□□□□ 0.22
COL1A1-208ENST00000494334 C2orf69Q8N8R5 385 aa16.44■□□□□ 0.22
COL1A1-208ENST00000494334 IDI2Q9BXS1 227 aa16.44■□□□□ 0.22
COL1A1-208ENST00000494334 AATFQ9NY61 560 aaKnown RBP eCLIP16.44■□□□□ 0.22
COL1A1-208ENST00000494334 FAM198AQ9UFP1 575 aa16.44■□□□□ 0.22
COL1A1-208ENST00000494334 STAP2Q9UGK3 403 aa16.44■□□□□ 0.22
COL1A1-208ENST00000494334 MYH2Q9UKX2 1941 aa16.43■□□□□ 0.22
COL1A1-208ENST00000494334 ECM29Q5VYK3 1845 aa16.43■□□□□ 0.22
COL1A1-208ENST00000494334 WDHD1O75717 1129 aaPredicted RBP16.43■□□□□ 0.22
COL1A1-208ENST00000494334 BAG3O95817 575 aa16.43■□□□□ 0.22
COL1A1-208ENST00000494334 PDE6AP16499 860 aa16.43■□□□□ 0.22
COL1A1-208ENST00000494334 NF2P35240 595 aa16.43■□□□□ 0.22
COL1A1-208ENST00000494334 SUPT20HL1Q3ZLR7 823 aa16.43■□□□□ 0.22
COL1A1-208ENST00000494334 TMED8Q6PL24 325 aaPredicted RBP16.43■□□□□ 0.22
COL1A1-208ENST00000494334 DNAJC5GQ8N7S2 189 aa16.43■□□□□ 0.22
COL1A1-208ENST00000494334 FAM151AQ8WW52 585 aa16.43■□□□□ 0.22
COL1A1-208ENST00000494334 RASSF10A6NK89 507 aa16.42■□□□□ 0.22
COL1A1-208ENST00000494334 MAP4K4O95819 1239 aaPredicted RBP16.42■□□□□ 0.22
COL1A1-208ENST00000494334 DYNLL1P63167 89 aaKnown RBP16.42■□□□□ 0.22
COL1A1-208ENST00000494334 FKBP1BP68106 108 aa16.42■□□□□ 0.22
COL1A1-208ENST00000494334 TCP10Q12799 353 aa16.42■□□□□ 0.22
COL1A1-208ENST00000494334 DEFB115Q30KQ5 88 aa16.42■□□□□ 0.22
COL1A1-208ENST00000494334 MOB2Q70IA6 237 aa16.42■□□□□ 0.22
COL1A1-208ENST00000494334 ZFPM1Q8IX07 1006 aa16.42■□□□□ 0.22
COL1A1-208ENST00000494334 MIGA1Q8NAN2 632 aa16.42■□□□□ 0.22
COL1A1-208ENST00000494334 SH3RF3Q8TEJ3 882 aaPredicted RBP16.42■□□□□ 0.22
COL1A1-208ENST00000494334 NOL10Q9BSC4 688 aaKnown RBP16.42■□□□□ 0.22
COL1A1-208ENST00000494334 DDX4Q9NQI0 724 aaKnown RBP16.42■□□□□ 0.22
COL1A1-208ENST00000494334 MKRN1Q9UHC7 482 aaKnown RBP16.42■□□□□ 0.22
COL1A1-208ENST00000494334 ZNF532Q9HCE3 1301 aa16.42■□□□□ 0.22
COL1A1-208ENST00000494334 TRPM7Q96QT4 1865 aa16.42■□□□□ 0.22
COL1A1-208ENST00000494334 RFX7Q2KHR2 1363 aa16.41■□□□□ 0.22
COL1A1-208ENST00000494334 TCRBV5S4A2TA0A5A2 114 aa16.41■□□□□ 0.22
COL1A1-208ENST00000494334 ENTPD3O75355 529 aa16.41■□□□□ 0.22
COL1A1-208ENST00000494334 CHGBP05060 677 aa16.41■□□□□ 0.22
COL1A1-208ENST00000494334 NEFLP07196 543 aa16.41■□□□□ 0.22
COL1A1-208ENST00000494334 ADD2P35612 726 aa16.41■□□□□ 0.22
COL1A1-208ENST00000494334 RGS3P49796 1198 aa16.41■□□□□ 0.22
COL1A1-208ENST00000494334 HUNKP57058 714 aa16.41■□□□□ 0.22
COL1A1-208ENST00000494334 PRKG1Q13976 671 aa16.41■□□□□ 0.22
COL1A1-208ENST00000494334 SLFNL1Q499Z3 407 aa16.41■□□□□ 0.22
COL1A1-208ENST00000494334 PLEKHM2Q8IWE5 1019 aa16.41■□□□□ 0.22
COL1A1-208ENST00000494334 KBTBD3Q8NAB2 608 aa16.41■□□□□ 0.22
COL1A1-208ENST00000494334 FZD1Q9UP38 647 aa16.41■□□□□ 0.22
COL1A1-208ENST00000494334 MYO5AQ9Y4I1 1855 aaKnown RBP16.41■□□□□ 0.22
COL1A1-208ENST00000494334 SSC5DA1L4H1 1573 aa16.4■□□□□ 0.22
COL1A1-208ENST00000494334 PLCG2P16885 1265 aa16.4■□□□□ 0.22
COL1A1-208ENST00000494334 PICALMQ13492 652 aa16.4■□□□□ 0.22
COL1A1-208ENST00000494334 TTLL12Q14166 644 aaPredicted RBP16.4■□□□□ 0.22
COL1A1-208ENST00000494334 TEX11Q8IYF3 940 aa16.4■□□□□ 0.22
COL1A1-208ENST00000494334 KLRG1Q96E93 195 aa16.4■□□□□ 0.22
COL1A1-208ENST00000494334 HHIPL1Q96JK4 782 aa16.4■□□□□ 0.22
COL1A1-208ENST00000494334 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.4■□□□□ 0.22
COL1A1-208ENST00000494334 UBE2Q2LH0YL09 131 aa16.39■□□□□ 0.21
COL1A1-208ENST00000494334 PPP1R12BO60237 982 aaPredicted RBP16.39■□□□□ 0.21
COL1A1-208ENST00000494334 USP2O75604 605 aaPredicted RBP16.39■□□□□ 0.21
COL1A1-208ENST00000494334 NPM3O75607 178 aaKnown RBP16.39■□□□□ 0.21
COL1A1-208ENST00000494334 PDE4AP27815 886 aa16.39■□□□□ 0.21
COL1A1-208ENST00000494334 UBE3CQ15386 1083 aa16.39■□□□□ 0.21
COL1A1-208ENST00000494334 MAP3K11Q16584 847 aa16.39■□□□□ 0.21
COL1A1-208ENST00000494334 ZSCAN25Q6NSZ9 544 aa16.39■□□□□ 0.21
COL1A1-208ENST00000494334 SH3BP5LQ7L8J4 393 aa16.39■□□□□ 0.21
COL1A1-208ENST00000494334 ARMC9Q7Z3E5 817 aa16.39■□□□□ 0.21
COL1A1-208ENST00000494334 RIOK1Q9BRS2 568 aaKnown RBP16.39■□□□□ 0.21
COL1A1-208ENST00000494334 OSBPL3Q9H4L5 887 aa16.39■□□□□ 0.21
COL1A1-208ENST00000494334 ANGEL1Q9UNK9 670 aaKnown RBP16.39■□□□□ 0.21
COL1A1-208ENST00000494334 DOCK2Q92608 1830 aa16.39■□□□□ 0.21
COL1A1-208ENST00000494334 RPAP1Q9BWH6 1393 aaPredicted RBP16.38■□□□□ 0.21
COL1A1-208ENST00000494334 MAST2Q6P0Q8 1798 aa16.38■□□□□ 0.21
COL1A1-208ENST00000494334 TGFBRAP1Q8WUH2 860 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms