RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 CELF2O95319 508 aaKnown RBP14.3□□□□□ -0.12
UBA3-211ENST00000493957 SULF1Q8IWU6 871 aa14.3□□□□□ -0.12
UBA3-211ENST00000493957 ZNF384Q8TF68 577 aa14.3□□□□□ -0.12
UBA3-211ENST00000493957 CDCA5Q96FF9 252 aa14.3□□□□□ -0.12
UBA3-211ENST00000493957 DCTPP1Q9H773 170 aa14.3□□□□□ -0.12
UBA3-211ENST00000493957 ABCF2Q9UG63 623 aa14.3□□□□□ -0.12
UBA3-211ENST00000493957 PDS5AQ29RF7 1337 aaKnown RBP14.3□□□□□ -0.12
UBA3-211ENST00000493957 PITPNM2Q9BZ72 1349 aa14.3□□□□□ -0.12
UBA3-211ENST00000493957 TMEM88BA6NKF7 163 aa14.29□□□□□ -0.12
UBA3-211ENST00000493957 SEC24BO95487 1268 aa14.29□□□□□ -0.12
UBA3-211ENST00000493957 LDHBP07195 334 aaKnown RBP14.29□□□□□ -0.12
UBA3-211ENST00000493957 UQCRFS1P1P0C7P4 283 aa14.29□□□□□ -0.12
UBA3-211ENST00000493957 ZAP70P43403 619 aa14.29□□□□□ -0.12
UBA3-211ENST00000493957 MMP14P50281 582 aa14.29□□□□□ -0.12
UBA3-211ENST00000493957 CACNB3P54284 484 aa14.29□□□□□ -0.12
UBA3-211ENST00000493957 CCDC158Q5M9N0 1113 aa14.29□□□□□ -0.12
UBA3-211ENST00000493957 CLASRPQ8N2M8 674 aaKnown RBP14.29□□□□□ -0.12
UBA3-211ENST00000493957 SUGT1Q9Y2Z0 365 aa14.29□□□□□ -0.12
UBA3-211ENST00000493957 DAGLAQ9Y4D2 1042 aa14.29□□□□□ -0.12
UBA3-211ENST00000493957 PAPPA2Q9BXP8 1791 aa14.29□□□□□ -0.12
UBA3-211ENST00000493957 SSC5DA1L4H1 1573 aa14.28□□□□□ -0.12
UBA3-211ENST00000493957 HDLBPQ00341 1268 aaKnown RBP14.28□□□□□ -0.12
UBA3-211ENST00000493957 APOBEC3HQ6NTF7 200 aaKnown RBP14.28□□□□□ -0.12
UBA3-211ENST00000493957 DNAJC5GQ8N7S2 189 aa14.28□□□□□ -0.12
UBA3-211ENST00000493957 TEKT1Q969V4 418 aa14.28□□□□□ -0.12
UBA3-211ENST00000493957 ZDHHC15Q96MV8 337 aa14.28□□□□□ -0.12
UBA3-211ENST00000493957 LRRCC1Q9C099 1032 aa14.28□□□□□ -0.12
UBA3-211ENST00000493957 VEZTQ9HBM0 779 aa14.28□□□□□ -0.12
UBA3-211ENST00000493957 PIH1D3Q9NQM4 214 aaKnown RBP14.28□□□□□ -0.12
UBA3-211ENST00000493957 ZNF70Q9UC06 446 aaPredicted RBP14.28□□□□□ -0.12
UBA3-211ENST00000493957 MAST3O60307 1309 aa14.27□□□□□ -0.12
UBA3-211ENST00000493957 TTLL13PA6NNM8 815 aa14.27□□□□□ -0.13
UBA3-211ENST00000493957 CYP2E1P05181 493 aaPredicted RBP14.27□□□□□ -0.13
UBA3-211ENST00000493957 IFIT2P09913 472 aaKnown RBP14.27□□□□□ -0.13
UBA3-211ENST00000493957 MECOMQ03112 1051 aa14.27□□□□□ -0.13
UBA3-211ENST00000493957 ZNF512BQ96KM6 892 aaPredicted RBP14.27□□□□□ -0.13
UBA3-211ENST00000493957 ANTXR1Q9H6X2 564 aa14.27□□□□□ -0.13
UBA3-211ENST00000493957 MKRN1Q9UHC7 482 aaKnown RBP14.27□□□□□ -0.13
UBA3-211ENST00000493957 HHIPL2Q6UWX4 724 aa14.26□□□□□ -0.13
UBA3-211ENST00000493957 MOB2Q70IA6 237 aa14.26□□□□□ -0.13
UBA3-211ENST00000493957 ERICH6Q7L0X2 663 aa14.26□□□□□ -0.13
UBA3-211ENST00000493957 DZIP1Q86YF9 867 aaKnown RBP14.26□□□□□ -0.13
UBA3-211ENST00000493957 APOBEC3FQ8IUX4 373 aaKnown RBP14.26□□□□□ -0.13
UBA3-211ENST00000493957 ZGPATQ8N5A5 531 aaKnown RBP14.26□□□□□ -0.13
UBA3-211ENST00000493957 ABT1Q9ULW3 272 aaKnown RBP14.26□□□□□ -0.13
UBA3-211ENST00000493957 FZD1Q9UP38 647 aa14.26□□□□□ -0.13
UBA3-211ENST00000493957 CNTNAP1P78357 1384 aa14.25□□□□□ -0.13
UBA3-211ENST00000493957 GAKO14976 1311 aa14.25□□□□□ -0.13
UBA3-211ENST00000493957 TCP10L2B9ZVM9 353 aa14.25□□□□□ -0.13
UBA3-211ENST00000493957 MYO1BO43795 1136 aa14.25□□□□□ -0.13
UBA3-211ENST00000493957 IGHDP01880 384 aa14.25□□□□□ -0.13
UBA3-211ENST00000493957 HDAC1Q13547 482 aaPredicted RBP14.25□□□□□ -0.13
UBA3-211ENST00000493957 TSHZ3Q63HK5 1081 aa14.25□□□□□ -0.13
UBA3-211ENST00000493957 OTUD7AQ8TE49 926 aaPredicted RBP14.25□□□□□ -0.13
UBA3-211ENST00000493957 EDC3Q96F86 508 aaKnown RBP14.25□□□□□ -0.13
UBA3-211ENST00000493957 MRIQ9BWK5 157 aa14.25□□□□□ -0.13
UBA3-211ENST00000493957 DEFB129Q9H1M3 183 aa14.25□□□□□ -0.13
UBA3-211ENST00000493957 RAI14Q9P0K7 980 aa14.25□□□□□ -0.13
UBA3-211ENST00000493957 MYH1P12882 1939 aa14.25□□□□□ -0.13
UBA3-211ENST00000493957 SIPA1L1O43166 1804 aa14.25□□□□□ -0.13
UBA3-211ENST00000493957 THSD7BQ9C0I4 1608 aa14.24□□□□□ -0.13
UBA3-211ENST00000493957 RASA3Q14644 834 aa14.24□□□□□ -0.13
UBA3-211ENST00000493957 SPTY2D1Q68D10 685 aaPredicted RBP14.24□□□□□ -0.13
UBA3-211ENST00000493957 CDC42EP5Q6NZY7 148 aa14.24□□□□□ -0.13
UBA3-211ENST00000493957 NSUN4Q96CB9 384 aaKnown RBP14.24□□□□□ -0.13
UBA3-211ENST00000493957 LRP2BPQ9P2M1 347 aa14.24□□□□□ -0.13
UBA3-211ENST00000493957 TLL2Q9Y6L7 1015 aa14.24□□□□□ -0.13
UBA3-211ENST00000493957 MROH7-TTC4A0A0A0MT08 1334 aa14.23□□□□□ -0.13
UBA3-211ENST00000493957 NFIAQ12857 509 aa14.23□□□□□ -0.13
UBA3-211ENST00000493957 PRKG1Q13976 671 aa14.23□□□□□ -0.13
UBA3-211ENST00000493957 NBPF12Q5TAG4 269 aaPredicted RBP14.23□□□□□ -0.13
UBA3-211ENST00000493957 ADGRA1Q86SQ6 560 aa14.23□□□□□ -0.13
UBA3-211ENST00000493957 SAPCD2Q86UD0 394 aa14.23□□□□□ -0.13
UBA3-211ENST00000493957 KLRG1Q96E93 195 aa14.23□□□□□ -0.13
UBA3-211ENST00000493957 TMEM39BQ9GZU3 492 aa14.23□□□□□ -0.13
UBA3-211ENST00000493957 BOLA2Q9H3K6 86 aa14.23□□□□□ -0.13
UBA3-211ENST00000493957 GBA2Q9HCG7 927 aaPredicted RBP14.23□□□□□ -0.13
UBA3-211ENST00000493957 RFX7Q2KHR2 1363 aa14.22□□□□□ -0.13
UBA3-211ENST00000493957 BAZ2AQ9UIF9 1905 aaKnown RBP14.22□□□□□ -0.13
UBA3-211ENST00000493957 RASSF10A6NK89 507 aa14.22□□□□□ -0.13
UBA3-211ENST00000493957 ST18O60284 1047 aa14.22□□□□□ -0.13
UBA3-211ENST00000493957 BTDP43251 543 aa14.22□□□□□ -0.13
UBA3-211ENST00000493957 AAMPQ13685 434 aa14.22□□□□□ -0.13
UBA3-211ENST00000493957 TEPSINQ96N21 525 aa14.22□□□□□ -0.13
UBA3-211ENST00000493957 DNAJC2Q99543 621 aaKnown RBP14.22□□□□□ -0.13
UBA3-211ENST00000493957 USP40Q9NVE5 1235 aa14.22□□□□□ -0.13
UBA3-211ENST00000493957 NAV1Q8NEY1 1877 aa14.22□□□□□ -0.13
UBA3-211ENST00000493957 GOLIM4O00461 696 aa14.21□□□□□ -0.13
UBA3-211ENST00000493957 IDH1O75874 414 aaKnown RBP14.21□□□□□ -0.13
UBA3-211ENST00000493957 ATP5JP18859 108 aa14.21□□□□□ -0.13
UBA3-211ENST00000493957 VEGFBP49765 207 aa14.21□□□□□ -0.13
UBA3-211ENST00000493957 CYP4F22Q6NT55 531 aa14.21□□□□□ -0.13
UBA3-211ENST00000493957 ZFPM1Q8IX07 1006 aa14.21□□□□□ -0.13
UBA3-211ENST00000493957 FAM198AQ9UFP1 575 aa14.21□□□□□ -0.13
UBA3-211ENST00000493957 ATAD5Q96QE3 1844 aa14.2□□□□□ -0.14
UBA3-211ENST00000493957 LAMB1P07942 1786 aa14.2□□□□□ -0.14
UBA3-211ENST00000493957 GPR75-ASB3A0A0A6YYF3 556 aa14.2□□□□□ -0.14
UBA3-211ENST00000493957 UBE2Q2LH0YL09 131 aa14.2□□□□□ -0.14
UBA3-211ENST00000493957 CHGBP05060 677 aa14.2□□□□□ -0.14
UBA3-211ENST00000493957 HUNKP57058 714 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms