RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 VEZTQ9HBM0 779 aa18.98■□□□□ 0.63
HPS4-216ENST00000493455 CLEC11AQ9Y240 323 aa18.98■□□□□ 0.63
HPS4-216ENST00000493455 CDK5RAP2Q96SN8 1893 aa18.98■□□□□ 0.63
HPS4-216ENST00000493455 GAKO14976 1311 aa18.98■□□□□ 0.63
HPS4-216ENST00000493455 ASTN2O75129 1339 aaPredicted RBP18.98■□□□□ 0.63
HPS4-216ENST00000493455 RFX7Q2KHR2 1363 aa18.97■□□□□ 0.63
HPS4-216ENST00000493455 A0A0D9SFI3 127 aa18.97■□□□□ 0.63
HPS4-216ENST00000493455 HIP1O00291 1037 aa18.97■□□□□ 0.63
HPS4-216ENST00000493455 WNT10BO00744 389 aa18.97■□□□□ 0.63
HPS4-216ENST00000493455 MYO1BO43795 1136 aa18.97■□□□□ 0.63
HPS4-216ENST00000493455 CDC45O75419 566 aa18.97■□□□□ 0.63
HPS4-216ENST00000493455 BAG3O95817 575 aa18.97■□□□□ 0.63
HPS4-216ENST00000493455 VEGFAP15692 232 aaPredicted RBP18.97■□□□□ 0.63
HPS4-216ENST00000493455 CACNB3P54284 484 aa18.97■□□□□ 0.63
HPS4-216ENST00000493455 CCDC129Q6ZRS4 1044 aa18.97■□□□□ 0.63
HPS4-216ENST00000493455 OSBP2Q969R2 916 aa18.97■□□□□ 0.63
HPS4-216ENST00000493455 AIDAQ96BJ3 306 aa18.97■□□□□ 0.63
HPS4-216ENST00000493455 ZDHHC15Q96MV8 337 aa18.97■□□□□ 0.63
HPS4-216ENST00000493455 USP40Q9NVE5 1235 aa18.97■□□□□ 0.63
HPS4-216ENST00000493455 SCAF8Q9UPN6 1271 aaKnown RBP18.97■□□□□ 0.63
HPS4-216ENST00000493455 POLR2AP24928 1970 aaKnown RBP18.97■□□□□ 0.63
HPS4-216ENST00000493455 HIRAP54198 1017 aaPredicted RBP18.96■□□□□ 0.63
HPS4-216ENST00000493455 ZMYM1Q5SVZ6 1142 aa18.96■□□□□ 0.63
HPS4-216ENST00000493455 APOBEC3HQ6NTF7 200 aaKnown RBP18.96■□□□□ 0.63
HPS4-216ENST00000493455 LCORLQ8N3X6 602 aa18.96■□□□□ 0.63
HPS4-216ENST00000493455 SH3RF3Q8TEJ3 882 aaPredicted RBP18.96■□□□□ 0.63
HPS4-216ENST00000493455 TMOD2Q9NZR1 351 aa18.96■□□□□ 0.63
HPS4-216ENST00000493455 GPR75-ASB3A0A0A6YYF3 556 aa18.95■□□□□ 0.62
HPS4-216ENST00000493455 CHMLP26374 656 aa18.95■□□□□ 0.62
HPS4-216ENST00000493455 PICALMQ13492 652 aa18.95■□□□□ 0.62
HPS4-216ENST00000493455 CDC42EP5Q6NZY7 148 aa18.95■□□□□ 0.62
HPS4-216ENST00000493455 CASC1Q6TDU7 716 aa18.95■□□□□ 0.62
HPS4-216ENST00000493455 TEX11Q8IYF3 940 aa18.95■□□□□ 0.62
HPS4-216ENST00000493455 FAM163AQ96GL9 167 aaPredicted RBP18.95■□□□□ 0.62
HPS4-216ENST00000493455 MRIQ9BWK5 157 aa18.95■□□□□ 0.62
HPS4-216ENST00000493455 GGA3Q9NZ52 723 aa18.95■□□□□ 0.62
HPS4-216ENST00000493455 TCP10L2B9ZVM9 353 aa18.94■□□□□ 0.62
HPS4-216ENST00000493455 GPAA1O43292 621 aa18.94■□□□□ 0.62
HPS4-216ENST00000493455 IGSF3O75054 1194 aa18.94■□□□□ 0.62
HPS4-216ENST00000493455 POTEIP0CG38 1075 aa18.94■□□□□ 0.62
HPS4-216ENST00000493455 POTEJP0CG39 1038 aa18.94■□□□□ 0.62
HPS4-216ENST00000493455 MMP14P50281 582 aa18.94■□□□□ 0.62
HPS4-216ENST00000493455 ANGEL2Q5VTE6 544 aaKnown RBP18.94■□□□□ 0.62
HPS4-216ENST00000493455 USP50Q70EL3 339 aaPredicted RBP18.94■□□□□ 0.62
HPS4-216ENST00000493455 MTMR14Q8NCE2 650 aa18.94■□□□□ 0.62
HPS4-216ENST00000493455 ZNF70Q9UC06 446 aaPredicted RBP18.94■□□□□ 0.62
HPS4-216ENST00000493455 NAV1Q8NEY1 1877 aa18.94■□□□□ 0.62
HPS4-216ENST00000493455 USP5P45974 858 aa18.93■□□□□ 0.62
HPS4-216ENST00000493455 MCMDC2Q4G0Z9 681 aa18.93■□□□□ 0.62
HPS4-216ENST00000493455 PNMA8AQ86V59 439 aaPredicted RBP18.93■□□□□ 0.62
HPS4-216ENST00000493455 RUFY2Q8WXA3 655 aa18.93■□□□□ 0.62
HPS4-216ENST00000493455 HELLSQ9NRZ9 838 aa18.93■□□□□ 0.62
HPS4-216ENST00000493455 FOCADQ5VW36 1801 aa18.93■□□□□ 0.62
HPS4-216ENST00000493455 BAZ2AQ9UIF9 1905 aaKnown RBP18.92■□□□□ 0.62
HPS4-216ENST00000493455 PRKAB2O43741 272 aa18.92■□□□□ 0.62
HPS4-216ENST00000493455 PLCG2P16885 1265 aa18.92■□□□□ 0.62
HPS4-216ENST00000493455 TCP10Q12799 353 aa18.92■□□□□ 0.62
HPS4-216ENST00000493455 SPDYE2Q495Y8 402 aa18.92■□□□□ 0.62
HPS4-216ENST00000493455 TMED8Q6PL24 325 aaPredicted RBP18.92■□□□□ 0.62
HPS4-216ENST00000493455 ZNF589Q86UQ0 364 aaPredicted RBP18.92■□□□□ 0.62
HPS4-216ENST00000493455 MAPKAPK5Q8IW41 473 aa18.92■□□□□ 0.62
HPS4-216ENST00000493455 TGFBRAP1Q8WUH2 860 aa18.92■□□□□ 0.62
HPS4-216ENST00000493455 ZBED3Q96IU2 234 aaPredicted RBP18.92■□□□□ 0.62
HPS4-216ENST00000493455 RIOK1Q9BRS2 568 aaKnown RBP18.92■□□□□ 0.62
HPS4-216ENST00000493455 CRNKL1Q9BZJ0 848 aaKnown RBP18.92■□□□□ 0.62
HPS4-216ENST00000493455 SLC4A4Q9Y6R1 1079 aa18.92■□□□□ 0.62
HPS4-216ENST00000493455 MYH1P12882 1939 aa18.92■□□□□ 0.62
HPS4-216ENST00000493455 APPP05067 770 aa18.91■□□□□ 0.62
HPS4-216ENST00000493455 RHBDL3P58872 404 aa18.91■□□□□ 0.62
HPS4-216ENST00000493455 SLC4A8Q2Y0W8 1093 aa18.91■□□□□ 0.62
HPS4-216ENST00000493455 SDR42E1Q8WUS8 393 aa18.91■□□□□ 0.62
HPS4-216ENST00000493455 DCPSQ96C86 337 aaKnown RBP18.91■□□□□ 0.62
HPS4-216ENST00000493455 IL25Q9H293 177 aa18.91■□□□□ 0.62
HPS4-216ENST00000493455 PPP4CP60510 307 aa18.9■□□□□ 0.62
HPS4-216ENST00000493455 NFIAQ12857 509 aa18.9■□□□□ 0.62
HPS4-216ENST00000493455 ZNF784Q8NCA9 323 aaPredicted RBP18.9■□□□□ 0.62
HPS4-216ENST00000493455 CCDC171Q6TFL3 1326 aa18.9■□□□□ 0.62
HPS4-216ENST00000493455 MAP1SQ66K74 1059 aaPredicted RBP18.89■□□□□ 0.61
HPS4-216ENST00000493455 STRBPQ96SI9 672 aaKnown RBP18.89■□□□□ 0.61
HPS4-216ENST00000493455 ESYT1Q9BSJ8 1104 aa18.89■□□□□ 0.61
HPS4-216ENST00000493455 DDX4Q9NQI0 724 aaKnown RBP18.89■□□□□ 0.61
HPS4-216ENST00000493455 SAP30BPQ9UHR5 308 aaKnown RBP18.89■□□□□ 0.61
HPS4-216ENST00000493455 WDHD1O75717 1129 aaPredicted RBP18.88■□□□□ 0.61
HPS4-216ENST00000493455 MFAP1P55081 439 aaKnown RBP18.88■□□□□ 0.61
HPS4-216ENST00000493455 VPS53Q5VIR6 699 aa18.88■□□□□ 0.61
HPS4-216ENST00000493455 TICAM2Q86XR7 235 aa18.88■□□□□ 0.61
HPS4-216ENST00000493455 CERS3Q8IU89 383 aa18.88■□□□□ 0.61
HPS4-216ENST00000493455 APOBEC3FQ8IUX4 373 aaKnown RBP18.88■□□□□ 0.61
HPS4-216ENST00000493455 ZSCAN29Q8IWY8 852 aaPredicted RBP18.88■□□□□ 0.61
HPS4-216ENST00000493455 RAD50Q92878 1312 aa18.88■□□□□ 0.61
HPS4-216ENST00000493455 ADM5C9JUS6 153 aa18.87■□□□□ 0.61
HPS4-216ENST00000493455 FLT1P17948 1338 aa18.87■□□□□ 0.61
HPS4-216ENST00000493455 TNNI2P48788 182 aa18.87■□□□□ 0.61
HPS4-216ENST00000493455 LDHDQ86WU2 507 aa18.87■□□□□ 0.61
HPS4-216ENST00000493455 SULF1Q8IWU6 871 aa18.87■□□□□ 0.61
HPS4-216ENST00000493455 DDRGK1Q96HY6 314 aa18.87■□□□□ 0.61
HPS4-216ENST00000493455 FAM198AQ9UFP1 575 aa18.87■□□□□ 0.61
HPS4-216ENST00000493455 SGSM2O43147 1006 aa18.86■□□□□ 0.61
HPS4-216ENST00000493455 GNAT2P19087 354 aa18.86■□□□□ 0.61
HPS4-216ENST00000493455 TDO2P48775 406 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms