RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 TMOD2Q9NZR1 351 aa13.2□□□□□ -0.3
CDHR3-209ENST00000472116 RAPGEFL1Q9UHV5 662 aa13.2□□□□□ -0.3
CDHR3-209ENST00000472116 DDX58O95786 925 aaKnown RBP13.19□□□□□ -0.3
CDHR3-209ENST00000472116 TJAP1Q5JTD0 557 aa13.19□□□□□ -0.3
CDHR3-209ENST00000472116 CDAN1Q8IWY9 1227 aa13.19□□□□□ -0.3
CDHR3-209ENST00000472116 COA7Q96BR5 231 aa13.19□□□□□ -0.3
CDHR3-209ENST00000472116 LBHD1Q9BQE6 289 aaPredicted RBP13.19□□□□□ -0.3
CDHR3-209ENST00000472116 SERPINA10Q9UK55 444 aa13.19□□□□□ -0.3
CDHR3-209ENST00000472116 TTF2Q9UNY4 1162 aaKnown RBP13.19□□□□□ -0.3
CDHR3-209ENST00000472116 A0A1B0GUL6 1792 aa13.19□□□□□ -0.3
CDHR3-209ENST00000472116 PRUNE2Q8WUY3 3088 aa13.19□□□□□ -0.3
CDHR3-209ENST00000472116 NCOR1O75376 2440 aa13.18□□□□□ -0.3
CDHR3-209ENST00000472116 BCRP11274 1271 aa13.18□□□□□ -0.3
CDHR3-209ENST00000472116 MDM2Q00987 491 aaPredicted RBP13.18□□□□□ -0.3
CDHR3-209ENST00000472116 DZIP1LQ8IYY4 767 aaKnown RBP13.18□□□□□ -0.3
CDHR3-209ENST00000472116 JAG2Q9Y219 1238 aa13.18□□□□□ -0.3
CDHR3-209ENST00000472116 EYSQ5T1H1 3165 aa13.18□□□□□ -0.3
CDHR3-209ENST00000472116 IL1R1P14778 569 aa13.17□□□□□ -0.3
CDHR3-209ENST00000472116 FOSL2P15408 326 aa13.17□□□□□ -0.3
CDHR3-209ENST00000472116 CHRNDQ07001 517 aa13.17□□□□□ -0.3
CDHR3-209ENST00000472116 ZNF341Q9BYN7 854 aa13.17□□□□□ -0.3
CDHR3-209ENST00000472116 HMX1Q9NP08 348 aaPredicted RBP13.17□□□□□ -0.3
CDHR3-209ENST00000472116 COL2A1P02458 1487 aaPredicted RBP13.16□□□□□ -0.3
CDHR3-209ENST00000472116 MFSD14BQ5SR56 506 aa13.16□□□□□ -0.3
CDHR3-209ENST00000472116 SMCR8Q8TEV9 937 aaPredicted RBP13.16□□□□□ -0.3
CDHR3-209ENST00000472116 METTL22Q9BUU2 404 aaPredicted RBP13.16□□□□□ -0.3
CDHR3-209ENST00000472116 SPTBN5Q9NRC6 3674 aaKnown RBP13.15□□□□□ -0.3
CDHR3-209ENST00000472116 CHL1O00533 1208 aa13.15□□□□□ -0.3
CDHR3-209ENST00000472116 HMGCRP04035 888 aa13.15□□□□□ -0.3
CDHR3-209ENST00000472116 CYP2C8P10632 490 aa13.15□□□□□ -0.3
CDHR3-209ENST00000472116 ITGA6P23229 1130 aa13.15□□□□□ -0.3
CDHR3-209ENST00000472116 CRKP46108 304 aa13.15□□□□□ -0.3
CDHR3-209ENST00000472116 NEXNQ0ZGT2 675 aa13.15□□□□□ -0.3
CDHR3-209ENST00000472116 C15orf52Q6ZUT6 534 aaKnown RBP13.15□□□□□ -0.3
CDHR3-209ENST00000472116 MYLIPQ8WY64 445 aa13.15□□□□□ -0.3
CDHR3-209ENST00000472116 KCNH4Q9UQ05 1017 aa13.15□□□□□ -0.3
CDHR3-209ENST00000472116 MAP3K12Q12852 859 aa13.14□□□□□ -0.31
CDHR3-209ENST00000472116 DUSP27Q5VZP5 1158 aa13.14□□□□□ -0.31
CDHR3-209ENST00000472116 SP7Q8TDD2 431 aaPredicted RBP13.14□□□□□ -0.31
CDHR3-209ENST00000472116 PHAXQ9H814 394 aaKnown RBP13.14□□□□□ -0.31
CDHR3-209ENST00000472116 PRKAG2Q9UGJ0 569 aa13.14□□□□□ -0.31
CDHR3-209ENST00000472116 TAF5LO75529 589 aa13.13□□□□□ -0.31
CDHR3-209ENST00000472116 FASTKD5Q7L8L6 764 aaKnown RBP13.13□□□□□ -0.31
CDHR3-209ENST00000472116 SEMA6BQ9H3T3 888 aa13.13□□□□□ -0.31
CDHR3-209ENST00000472116 PTPRFP10586 1907 aa13.13□□□□□ -0.31
CDHR3-209ENST00000472116 LAMA2P24043 3122 aaKnown RBP13.13□□□□□ -0.31
CDHR3-209ENST00000472116 MYO9BQ13459 2157 aa13.13□□□□□ -0.31
CDHR3-209ENST00000472116 INPP5BP32019 993 aa13.12□□□□□ -0.31
CDHR3-209ENST00000472116 TMPOP42166 694 aaKnown RBP13.12□□□□□ -0.31
CDHR3-209ENST00000472116 FAM83AQ86UY5 434 aa13.12□□□□□ -0.31
CDHR3-209ENST00000472116 MAP3K2Q9Y2U5 619 aa13.12□□□□□ -0.31
CDHR3-209ENST00000472116 ANKRD18BA2A2Z9 1011 aa13.11□□□□□ -0.31
CDHR3-209ENST00000472116 CXCL11O14625 94 aa13.11□□□□□ -0.31
CDHR3-209ENST00000472116 CACNB3P54284 484 aa13.11□□□□□ -0.31
CDHR3-209ENST00000472116 NEUROD2Q15784 382 aa13.11□□□□□ -0.31
CDHR3-209ENST00000472116 MIGA2Q7L4E1 593 aa13.11□□□□□ -0.31
CDHR3-209ENST00000472116 UBE3BQ7Z3V4 1068 aa13.11□□□□□ -0.31
CDHR3-209ENST00000472116 IL27Q8NEV9 243 aa13.11□□□□□ -0.31
CDHR3-209ENST00000472116 CHMP4AQ9BY43 222 aa13.11□□□□□ -0.31
CDHR3-209ENST00000472116 OGDHLQ9ULD0 1010 aa13.11□□□□□ -0.31
CDHR3-209ENST00000472116 RPAP1Q9BWH6 1393 aaPredicted RBP13.1□□□□□ -0.31
CDHR3-209ENST00000472116 MAST2Q6P0Q8 1798 aa13.1□□□□□ -0.31
CDHR3-209ENST00000472116 SNAP23O00161 211 aa13.1□□□□□ -0.31
CDHR3-209ENST00000472116 GADL1Q6ZQY3 521 aa13.1□□□□□ -0.31
CDHR3-209ENST00000472116 TEKT1Q969V4 418 aa13.1□□□□□ -0.31
CDHR3-209ENST00000472116 HCN4Q9Y3Q4 1203 aa13.1□□□□□ -0.31
CDHR3-209ENST00000472116 PFASO15067 1338 aa13.1□□□□□ -0.31
CDHR3-209ENST00000472116 HDLBPQ00341 1268 aaKnown RBP13.09□□□□□ -0.31
CDHR3-209ENST00000472116 MOGSQ13724 837 aa13.09□□□□□ -0.31
CDHR3-209ENST00000472116 FKBP1CQ5VVH2 108 aa13.09□□□□□ -0.31
CDHR3-209ENST00000472116 GPAT2Q6NUI2 795 aa13.09□□□□□ -0.31
CDHR3-209ENST00000472116 SLC45A1Q9Y2W3 748 aa13.09□□□□□ -0.31
CDHR3-209ENST00000472116 MUC3AQ02505 3323 aa13.09□□□□□ -0.31
CDHR3-209ENST00000472116 PCGF6Q9BYE7 350 aa13.08□□□□□ -0.32
CDHR3-209ENST00000472116 PNMA3Q9UL41 463 aa13.08□□□□□ -0.32
CDHR3-209ENST00000472116 LTBP2Q14767 1821 aa13.08□□□□□ -0.32
CDHR3-209ENST00000472116 FRMPD3Q5JV73 1810 aa13.08□□□□□ -0.32
CDHR3-209ENST00000472116 MYH13Q9UKX3 1938 aa13.07□□□□□ -0.32
CDHR3-209ENST00000472116 DOCK2Q92608 1830 aa13.07□□□□□ -0.32
CDHR3-209ENST00000472116 PLIN1O60240 522 aa13.07□□□□□ -0.32
CDHR3-209ENST00000472116 HIBADHP31937 336 aaKnown RBP13.07□□□□□ -0.32
CDHR3-209ENST00000472116 SMAD3P84022 425 aaKnown RBP13.07□□□□□ -0.32
CDHR3-209ENST00000472116 FAM110CQ1W6H9 321 aa13.07□□□□□ -0.32
CDHR3-209ENST00000472116 LRRC26Q2I0M4 334 aa13.07□□□□□ -0.32
CDHR3-209ENST00000472116 NOL9Q5SY16 702 aaKnown RBP13.07□□□□□ -0.32
CDHR3-209ENST00000472116 KSR2Q6VAB6 950 aa13.07□□□□□ -0.32
CDHR3-209ENST00000472116 ANKRD13CQ8N6S4 541 aa13.07□□□□□ -0.32
CDHR3-209ENST00000472116 PLA2G12BQ9BX93 195 aa13.07□□□□□ -0.32
CDHR3-209ENST00000472116 C1QTNF1Q9BXJ1 281 aa13.07□□□□□ -0.32
CDHR3-209ENST00000472116 PICK1Q9NRD5 415 aa13.07□□□□□ -0.32
CDHR3-209ENST00000472116 CHMP3Q9Y3E7 222 aa13.07□□□□□ -0.32
CDHR3-209ENST00000472116 MAST3O60307 1309 aa13.07□□□□□ -0.32
CDHR3-209ENST00000472116 A0A0G2JLL6 359 aaPredicted RBP13.06□□□□□ -0.32
CDHR3-209ENST00000472116 FRAT2O75474 233 aaPredicted RBP13.06□□□□□ -0.32
CDHR3-209ENST00000472116 IGKV5-2P06315 115 aa13.06□□□□□ -0.32
CDHR3-209ENST00000472116 IFIT5Q13325 482 aaKnown RBP13.06□□□□□ -0.32
CDHR3-209ENST00000472116 CWF19L2Q2TBE0 894 aaKnown RBP13.06□□□□□ -0.32
CDHR3-209ENST00000472116 TAF7LQ5H9L4 462 aa13.06□□□□□ -0.32
CDHR3-209ENST00000472116 PRRT2Q7Z6L0 340 aaPredicted RBP13.06□□□□□ -0.32
CDHR3-209ENST00000472116 VPS37DQ86XT2 251 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms