RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 SLF2Q8IX21 1173 aa15.79■□□□□ 0.12
COL5A1-206ENST00000465877 ZNF384Q8TF68 577 aa15.79■□□□□ 0.12
COL5A1-206ENST00000465877 DOCK1Q14185 1865 aa15.79■□□□□ 0.12
COL5A1-206ENST00000465877 CYP2E1P05181 493 aaPredicted RBP15.78■□□□□ 0.12
COL5A1-206ENST00000465877 ZAP70P43403 619 aa15.78■□□□□ 0.12
COL5A1-206ENST00000465877 PRKG1Q13976 671 aa15.78■□□□□ 0.12
COL5A1-206ENST00000465877 NBPF12Q5TAG4 269 aaPredicted RBP15.78■□□□□ 0.12
COL5A1-206ENST00000465877 FKBP1CQ5VVH2 108 aa15.78■□□□□ 0.12
COL5A1-206ENST00000465877 NSUN4Q96CB9 384 aaKnown RBP15.78■□□□□ 0.12
COL5A1-206ENST00000465877 TEPSINQ96N21 525 aa15.78■□□□□ 0.12
COL5A1-206ENST00000465877 LRRCC1Q9C099 1032 aa15.78■□□□□ 0.12
COL5A1-206ENST00000465877 TMEM39BQ9GZU3 492 aa15.78■□□□□ 0.12
COL5A1-206ENST00000465877 RAI14Q9P0K7 980 aa15.78■□□□□ 0.12
COL5A1-206ENST00000465877 FZD1Q9UP38 647 aa15.78■□□□□ 0.12
COL5A1-206ENST00000465877 PCDHB15Q9Y5E8 787 aa15.78■□□□□ 0.12
COL5A1-206ENST00000465877 MYH1P12882 1939 aa15.77■□□□□ 0.12
COL5A1-206ENST00000465877 AOC2O75106 756 aa15.77■□□□□ 0.12
COL5A1-206ENST00000465877 SLC10A3P09131 477 aa15.77■□□□□ 0.12
COL5A1-206ENST00000465877 IFIT2P09913 472 aaKnown RBP15.77■□□□□ 0.12
COL5A1-206ENST00000465877 HSPA1AP0DMV8 641 aaKnown RBP15.77■□□□□ 0.12
COL5A1-206ENST00000465877 HSPA1BP0DMV9 641 aaKnown RBP15.77■□□□□ 0.12
COL5A1-206ENST00000465877 CDC42EP5Q6NZY7 148 aa15.77■□□□□ 0.12
COL5A1-206ENST00000465877 FAM83AQ86UY5 434 aa15.77■□□□□ 0.12
COL5A1-206ENST00000465877 RASAL3Q86YV0 1011 aa15.77■□□□□ 0.12
COL5A1-206ENST00000465877 BCL11AQ9H165 835 aa15.77■□□□□ 0.12
COL5A1-206ENST00000465877 LRP2BPQ9P2M1 347 aa15.77■□□□□ 0.12
COL5A1-206ENST00000465877 FAM155AB1AL88 458 aaPredicted RBP15.76■□□□□ 0.11
COL5A1-206ENST00000465877 UBE2Q2LH0YL09 131 aa15.76■□□□□ 0.11
COL5A1-206ENST00000465877 BTDP43251 543 aa15.76■□□□□ 0.11
COL5A1-206ENST00000465877 ZNF157P51786 506 aaPredicted RBP15.76■□□□□ 0.11
COL5A1-206ENST00000465877 GSTO1P78417 241 aa15.76■□□□□ 0.11
COL5A1-206ENST00000465877 SUPT20HL1Q3ZLR7 823 aa15.76■□□□□ 0.11
COL5A1-206ENST00000465877 ARMC9Q7Z3E5 817 aa15.76■□□□□ 0.11
COL5A1-206ENST00000465877 ANGEL1Q9UNK9 670 aaKnown RBP15.76■□□□□ 0.11
COL5A1-206ENST00000465877 NDUFB9Q9Y6M9 179 aa15.76■□□□□ 0.11
COL5A1-206ENST00000465877 PPP1R12BO60237 982 aaPredicted RBP15.75■□□□□ 0.11
COL5A1-206ENST00000465877 SMARCA5O60264 1052 aaPredicted RBP15.75■□□□□ 0.11
COL5A1-206ENST00000465877 NFIAQ12857 509 aa15.75■□□□□ 0.11
COL5A1-206ENST00000465877 NOGQ13253 232 aa15.75■□□□□ 0.11
COL5A1-206ENST00000465877 FAM163AQ96GL9 167 aaPredicted RBP15.75■□□□□ 0.11
COL5A1-206ENST00000465877 DCTPP1Q9H773 170 aa15.75■□□□□ 0.11
COL5A1-206ENST00000465877 PIH1D3Q9NQM4 214 aaKnown RBP15.75■□□□□ 0.11
COL5A1-206ENST00000465877 COL2A1P02458 1487 aaPredicted RBP15.74■□□□□ 0.11
COL5A1-206ENST00000465877 MAP2K2P36507 400 aa15.74■□□□□ 0.11
COL5A1-206ENST00000465877 MAP3K11Q16584 847 aa15.74■□□□□ 0.11
COL5A1-206ENST00000465877 NAA16Q6N069 864 aaPredicted RBP15.74■□□□□ 0.11
COL5A1-206ENST00000465877 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.74■□□□□ 0.11
COL5A1-206ENST00000465877 CCDC102AQ96A19 550 aa15.74■□□□□ 0.11
COL5A1-206ENST00000465877 USP40Q9NVE5 1235 aa15.74■□□□□ 0.11
COL5A1-206ENST00000465877 FAM198AQ9UFP1 575 aa15.74■□□□□ 0.11
COL5A1-206ENST00000465877 SUPT16HQ9Y5B9 1047 aaKnown RBP15.74■□□□□ 0.11
COL5A1-206ENST00000465877 MYH8P13535 1937 aa15.73■□□□□ 0.11
COL5A1-206ENST00000465877 GPR75-ASB3A0A0A6YYF3 556 aa15.73■□□□□ 0.11
COL5A1-206ENST00000465877 IDH1O75874 414 aaKnown RBP15.73■□□□□ 0.11
COL5A1-206ENST00000465877 RHBDL3P58872 404 aa15.73■□□□□ 0.11
COL5A1-206ENST00000465877 TCP10Q12799 353 aa15.73■□□□□ 0.11
COL5A1-206ENST00000465877 AAMPQ13685 434 aa15.73■□□□□ 0.11
COL5A1-206ENST00000465877 FAM151AQ8WW52 585 aa15.73■□□□□ 0.11
COL5A1-206ENST00000465877 DNAJC2Q99543 621 aaKnown RBP15.73■□□□□ 0.11
COL5A1-206ENST00000465877 ANTXR1Q9H6X2 564 aa15.73■□□□□ 0.11
COL5A1-206ENST00000465877 PHIPQ8WWQ0 1821 aa15.73■□□□□ 0.11
COL5A1-206ENST00000465877 PTPRFP10586 1907 aa15.72■□□□□ 0.11
COL5A1-206ENST00000465877 IGSF3O75054 1194 aa15.72■□□□□ 0.11
COL5A1-206ENST00000465877 WDHD1O75717 1129 aaPredicted RBP15.72■□□□□ 0.11
COL5A1-206ENST00000465877 LDHCP07864 332 aa15.72■□□□□ 0.11
COL5A1-206ENST00000465877 IREB2P48200 963 aaKnown RBP15.72■□□□□ 0.11
COL5A1-206ENST00000465877 RGS3P49796 1198 aa15.72■□□□□ 0.11
COL5A1-206ENST00000465877 MAP2K1Q02750 393 aaPredicted RBP15.72■□□□□ 0.11
COL5A1-206ENST00000465877 LDLRAD1Q5T700 205 aa15.72■□□□□ 0.11
COL5A1-206ENST00000465877 ADGRA1Q86SQ6 560 aa15.72■□□□□ 0.11
COL5A1-206ENST00000465877 EXOC6Q8TAG9 804 aa15.72■□□□□ 0.11
COL5A1-206ENST00000465877 AIDAQ96BJ3 306 aa15.72■□□□□ 0.11
COL5A1-206ENST00000465877 ZIC5Q96T25 663 aa15.72■□□□□ 0.11
COL5A1-206ENST00000465877 IDI2Q9BXS1 227 aa15.72■□□□□ 0.11
COL5A1-206ENST00000465877 ATRNL1Q5VV63 1379 aa15.72■□□□□ 0.11
COL5A1-206ENST00000465877 PICALMQ13492 652 aa15.71■□□□□ 0.11
COL5A1-206ENST00000465877 HOOK2Q96ED9 719 aa15.71■□□□□ 0.11
COL5A1-206ENST00000465877 CLMNQ96JQ2 1002 aa15.71■□□□□ 0.11
COL5A1-206ENST00000465877 NOL10Q9BSC4 688 aaKnown RBP15.71■□□□□ 0.11
COL5A1-206ENST00000465877 DDX4Q9NQI0 724 aaKnown RBP15.71■□□□□ 0.11
COL5A1-206ENST00000465877 WBP1LQ9NX94 342 aa15.71■□□□□ 0.11
COL5A1-206ENST00000465877 AATFQ9NY61 560 aaKnown RBP eCLIP15.71■□□□□ 0.11
COL5A1-206ENST00000465877 GOLIM4O00461 696 aa15.7■□□□□ 0.1
COL5A1-206ENST00000465877 FOXN1O15353 648 aa15.7■□□□□ 0.1
COL5A1-206ENST00000465877 ENTPD3O75355 529 aa15.7■□□□□ 0.1
COL5A1-206ENST00000465877 USP2O75604 605 aaPredicted RBP15.7■□□□□ 0.1
COL5A1-206ENST00000465877 ATP5JP18859 108 aa15.7■□□□□ 0.1
COL5A1-206ENST00000465877 MAP3K12Q12852 859 aa15.7■□□□□ 0.1
COL5A1-206ENST00000465877 HDAC1Q13547 482 aaPredicted RBP15.7■□□□□ 0.1
COL5A1-206ENST00000465877 TTF1Q15361 905 aaPredicted RBP15.7■□□□□ 0.1
COL5A1-206ENST00000465877 ANKRD13AQ8IZ07 590 aa15.7■□□□□ 0.1
COL5A1-206ENST00000465877 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.7■□□□□ 0.1
COL5A1-206ENST00000465877 BAZ2AQ9UIF9 1905 aaKnown RBP15.7■□□□□ 0.1
COL5A1-206ENST00000465877 UNCXA6NJT0 531 aa15.69■□□□□ 0.1
COL5A1-206ENST00000465877 MAP4K4O95819 1239 aaPredicted RBP15.69■□□□□ 0.1
COL5A1-206ENST00000465877 KIF23Q02241 960 aaPredicted RBP15.69■□□□□ 0.1
COL5A1-206ENST00000465877 DCAF15Q66K64 600 aa15.69■□□□□ 0.1
COL5A1-206ENST00000465877 ZFPM1Q8IX07 1006 aa15.69■□□□□ 0.1
COL5A1-206ENST00000465877 TEX11Q8IYF3 940 aa15.69■□□□□ 0.1
COL5A1-206ENST00000465877 MAGEB6Q8N7X4 407 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms