RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 TNNI2P48788 182 aa17.65■□□□□ 0.42
SQSTM1-205ENST00000464493 CACNB3P54284 484 aa17.65■□□□□ 0.42
SQSTM1-205ENST00000464493 MAP3K12Q12852 859 aa17.65■□□□□ 0.42
SQSTM1-205ENST00000464493 FKBP1CQ5VVH2 108 aa17.65■□□□□ 0.42
SQSTM1-205ENST00000464493 PAG1Q9NWQ8 432 aa17.65■□□□□ 0.42
SQSTM1-205ENST00000464493 ABT1Q9ULW3 272 aaKnown RBP17.65■□□□□ 0.42
SQSTM1-205ENST00000464493 BTDP43251 543 aa17.64■□□□□ 0.41
SQSTM1-205ENST00000464493 TSHZ3Q63HK5 1081 aa17.64■□□□□ 0.41
SQSTM1-205ENST00000464493 C2orf69Q8N8R5 385 aa17.64■□□□□ 0.41
SQSTM1-205ENST00000464493 OTUD7AQ8TE49 926 aaPredicted RBP17.64■□□□□ 0.41
SQSTM1-205ENST00000464493 TTC41PQ6P2S7 1318 aa17.64■□□□□ 0.41
SQSTM1-205ENST00000464493 ERC2O15083 957 aa17.63■□□□□ 0.41
SQSTM1-205ENST00000464493 MX1P20591 662 aa17.63■□□□□ 0.41
SQSTM1-205ENST00000464493 NF2P35240 595 aa17.63■□□□□ 0.41
SQSTM1-205ENST00000464493 NUCB1Q02818 461 aa17.63■□□□□ 0.41
SQSTM1-205ENST00000464493 SUPT20HL1Q3ZLR7 823 aa17.63■□□□□ 0.41
SQSTM1-205ENST00000464493 FAM83AQ86UY5 434 aa17.63■□□□□ 0.41
SQSTM1-205ENST00000464493 CHD1LQ86WJ1 897 aa17.63■□□□□ 0.41
SQSTM1-205ENST00000464493 EDC3Q96F86 508 aaKnown RBP17.63■□□□□ 0.41
SQSTM1-205ENST00000464493 LNPKQ9C0E8 428 aa17.63■□□□□ 0.41
SQSTM1-205ENST00000464493 GBA2Q9HCG7 927 aaPredicted RBP17.63■□□□□ 0.41
SQSTM1-205ENST00000464493 TLL2Q9Y6L7 1015 aa17.63■□□□□ 0.41
SQSTM1-205ENST00000464493 BAG3O95817 575 aa17.62■□□□□ 0.41
SQSTM1-205ENST00000464493 CYP7A1P22680 504 aa17.62■□□□□ 0.41
SQSTM1-205ENST00000464493 NBPF12Q5TAG4 269 aaPredicted RBP17.62■□□□□ 0.41
SQSTM1-205ENST00000464493 TMED8Q6PL24 325 aaPredicted RBP17.62■□□□□ 0.41
SQSTM1-205ENST00000464493 SAPCD2Q86UD0 394 aa17.62■□□□□ 0.41
SQSTM1-205ENST00000464493 MAGEB6Q8N7X4 407 aa17.62■□□□□ 0.41
SQSTM1-205ENST00000464493 NOL10Q9BSC4 688 aaKnown RBP17.62■□□□□ 0.41
SQSTM1-205ENST00000464493 TMEM39BQ9GZU3 492 aa17.62■□□□□ 0.41
SQSTM1-205ENST00000464493 MAST2Q6P0Q8 1798 aa17.61■□□□□ 0.41
SQSTM1-205ENST00000464493 DOCK2Q92608 1830 aa17.61■□□□□ 0.41
SQSTM1-205ENST00000464493 MAP4K4O95819 1239 aaPredicted RBP17.61■□□□□ 0.41
SQSTM1-205ENST00000464493 RHBDL3P58872 404 aa17.61■□□□□ 0.41
SQSTM1-205ENST00000464493 NFIAQ12857 509 aa17.61■□□□□ 0.41
SQSTM1-205ENST00000464493 DEFB115Q30KQ5 88 aa17.61■□□□□ 0.41
SQSTM1-205ENST00000464493 SLC9C2Q5TAH2 1124 aa17.61■□□□□ 0.41
SQSTM1-205ENST00000464493 ADGRA1Q86SQ6 560 aa17.61■□□□□ 0.41
SQSTM1-205ENST00000464493 DNAJC5GQ8N7S2 189 aa17.61■□□□□ 0.41
SQSTM1-205ENST00000464493 TEPSINQ96N21 525 aa17.61■□□□□ 0.41
SQSTM1-205ENST00000464493 SALL3Q9BXA9 1300 aa17.61■□□□□ 0.41
SQSTM1-205ENST00000464493 CNTNAP1P78357 1384 aa17.61■□□□□ 0.41
SQSTM1-205ENST00000464493 RASSF10A6NK89 507 aa17.6■□□□□ 0.41
SQSTM1-205ENST00000464493 GLRX3O76003 335 aaKnown RBP17.6■□□□□ 0.41
SQSTM1-205ENST00000464493 NEFLP07196 543 aa17.6■□□□□ 0.41
SQSTM1-205ENST00000464493 PPP4CP60510 307 aa17.6■□□□□ 0.41
SQSTM1-205ENST00000464493 FKBP1BP68106 108 aa17.6■□□□□ 0.41
SQSTM1-205ENST00000464493 TCP10Q12799 353 aa17.6■□□□□ 0.41
SQSTM1-205ENST00000464493 PI4K2BQ8TCG2 481 aa17.6■□□□□ 0.41
SQSTM1-205ENST00000464493 FAM151AQ8WW52 585 aa17.6■□□□□ 0.41
SQSTM1-205ENST00000464493 IDI2Q9BXS1 227 aa17.6■□□□□ 0.41
SQSTM1-205ENST00000464493 AATFQ9NY61 560 aaKnown RBP eCLIP17.6■□□□□ 0.411e-6■□□□□ 10.1
SQSTM1-205ENST00000464493 FAM198AQ9UFP1 575 aa17.6■□□□□ 0.41
SQSTM1-205ENST00000464493 STAP2Q9UGK3 403 aa17.6■□□□□ 0.41
SQSTM1-205ENST00000464493 WDHD1O75717 1129 aaPredicted RBP17.59■□□□□ 0.41
SQSTM1-205ENST00000464493 PDE6AP16499 860 aa17.59■□□□□ 0.41
SQSTM1-205ENST00000464493 PLCG2P16885 1265 aa17.59■□□□□ 0.41
SQSTM1-205ENST00000464493 PDE1AP54750 535 aa17.59■□□□□ 0.41
SQSTM1-205ENST00000464493 HUNKP57058 714 aa17.59■□□□□ 0.41
SQSTM1-205ENST00000464493 TTLL12Q14166 644 aaPredicted RBP17.59■□□□□ 0.41
SQSTM1-205ENST00000464493 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.59■□□□□ 0.41
SQSTM1-205ENST00000464493 MKRN1Q9UHC7 482 aaKnown RBP17.59■□□□□ 0.41
SQSTM1-205ENST00000464493 PPP1R12BO60237 982 aaPredicted RBP17.58■□□□□ 0.4
SQSTM1-205ENST00000464493 ENTPD3O75355 529 aa17.58■□□□□ 0.4
SQSTM1-205ENST00000464493 RGS3P49796 1198 aa17.58■□□□□ 0.4
SQSTM1-205ENST00000464493 PRKG1Q13976 671 aa17.58■□□□□ 0.4
SQSTM1-205ENST00000464493 MOB2Q70IA6 237 aa17.58■□□□□ 0.4
SQSTM1-205ENST00000464493 ARMC9Q7Z3E5 817 aa17.58■□□□□ 0.4
SQSTM1-205ENST00000464493 CDAN1Q8IWY9 1227 aa17.58■□□□□ 0.4
SQSTM1-205ENST00000464493 TEX11Q8IYF3 940 aa17.58■□□□□ 0.4
SQSTM1-205ENST00000464493 SH3RF3Q8TEJ3 882 aaPredicted RBP17.58■□□□□ 0.4
SQSTM1-205ENST00000464493 KLRG1Q96E93 195 aa17.58■□□□□ 0.4
SQSTM1-205ENST00000464493 HHIPL1Q96JK4 782 aa17.58■□□□□ 0.4
SQSTM1-205ENST00000464493 ZNF532Q9HCE3 1301 aa17.57■□□□□ 0.4
SQSTM1-205ENST00000464493 PICALMQ13492 652 aa17.57■□□□□ 0.4
SQSTM1-205ENST00000464493 ZSCAN25Q6NSZ9 544 aa17.57■□□□□ 0.4
SQSTM1-205ENST00000464493 CERS3Q8IU89 383 aa17.57■□□□□ 0.4
SQSTM1-205ENST00000464493 ZFPM1Q8IX07 1006 aa17.57■□□□□ 0.4
SQSTM1-205ENST00000464493 KBTBD3Q8NAB2 608 aa17.57■□□□□ 0.4
SQSTM1-205ENST00000464493 MIGA1Q8NAN2 632 aa17.57■□□□□ 0.4
SQSTM1-205ENST00000464493 PAPPA2Q9BXP8 1791 aa17.57■□□□□ 0.4
SQSTM1-205ENST00000464493 RFX7Q2KHR2 1363 aa17.56■□□□□ 0.4
SQSTM1-205ENST00000464493 RPAP1Q9BWH6 1393 aaPredicted RBP17.56■□□□□ 0.4
SQSTM1-205ENST00000464493 TCRBV5S4A2TA0A5A2 114 aa17.56■□□□□ 0.4
SQSTM1-205ENST00000464493 UBE2Q2LH0YL09 131 aa17.56■□□□□ 0.4
SQSTM1-205ENST00000464493 NPM3O75607 178 aaKnown RBP17.56■□□□□ 0.4
SQSTM1-205ENST00000464493 ADD2P35612 726 aa17.56■□□□□ 0.4
SQSTM1-205ENST00000464493 DYNLL1P63167 89 aaKnown RBP17.56■□□□□ 0.4
SQSTM1-205ENST00000464493 PAXIP1Q6ZW49 1069 aaPredicted RBP17.56■□□□□ 0.4
SQSTM1-205ENST00000464493 HOOK2Q96ED9 719 aa17.56■□□□□ 0.4
SQSTM1-205ENST00000464493 DDX4Q9NQI0 724 aaKnown RBP17.56■□□□□ 0.4
SQSTM1-205ENST00000464493 ANGEL1Q9UNK9 670 aaKnown RBP17.56■□□□□ 0.4
SQSTM1-205ENST00000464493 FZD1Q9UP38 647 aa17.56■□□□□ 0.4
SQSTM1-205ENST00000464493 SSC5DA1L4H1 1573 aa17.56■□□□□ 0.4
SQSTM1-205ENST00000464493 AK9Q5TCS8 1911 aa17.56■□□□□ 0.4
SQSTM1-205ENST00000464493 MAGEB6P1A0A0J9YX57 407 aa17.55■□□□□ 0.4
SQSTM1-205ENST00000464493 USP2O75604 605 aaPredicted RBP17.55■□□□□ 0.4
SQSTM1-205ENST00000464493 VEGFBP49765 207 aa17.55■□□□□ 0.4
SQSTM1-205ENST00000464493 RGMBQ6NW40 437 aa17.55■□□□□ 0.4
SQSTM1-205ENST00000464493 PLEKHM2Q8IWE5 1019 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms