RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 BAZ2AQ9UIF9 1905 aaKnown RBP7.7□□□□□ -1.18
SF3B1-206ENST00000462613 CLRN2A0PK11 232 aa7.7□□□□□ -1.18
SF3B1-206ENST00000462613 HIP1O00291 1037 aa7.7□□□□□ -1.18
SF3B1-206ENST00000462613 EGFRP00533 1210 aa7.7□□□□□ -1.18
SF3B1-206ENST00000462613 BTDP43251 543 aa7.7□□□□□ -1.18
SF3B1-206ENST00000462613 HIRAP54198 1017 aaPredicted RBP7.7□□□□□ -1.18
SF3B1-206ENST00000462613 SUPT20HL1Q3ZLR7 823 aa7.7□□□□□ -1.18
SF3B1-206ENST00000462613 SPDYE2Q495Y8 402 aa7.7□□□□□ -1.18
SF3B1-206ENST00000462613 FKBP1CQ5VVH2 108 aa7.7□□□□□ -1.18
SF3B1-206ENST00000462613 TSHZ3Q63HK5 1081 aa7.7□□□□□ -1.18
SF3B1-206ENST00000462613 AMOTL1Q8IY63 956 aa7.7□□□□□ -1.18
SF3B1-206ENST00000462613 KBTBD3Q8NAB2 608 aa7.7□□□□□ -1.18
SF3B1-206ENST00000462613 RILPL2Q969X0 211 aa7.7□□□□□ -1.18
SF3B1-206ENST00000462613 PRMT6Q96LA8 375 aaPredicted RBP7.7□□□□□ -1.18
SF3B1-206ENST00000462613 OSBPL3Q9H4L5 887 aa7.7□□□□□ -1.18
SF3B1-206ENST00000462613 TDRD3Q9H7E2 651 aaKnown RBP7.7□□□□□ -1.18
SF3B1-206ENST00000462613 PIH1D3Q9NQM4 214 aaKnown RBP7.7□□□□□ -1.18
SF3B1-206ENST00000462613 USP40Q9NVE5 1235 aa7.7□□□□□ -1.18
SF3B1-206ENST00000462613 NDUFB9Q9Y6M9 179 aa7.7□□□□□ -1.18
SF3B1-206ENST00000462613 GAKO14976 1311 aa7.7□□□□□ -1.18
SF3B1-206ENST00000462613 LAMB1P07942 1786 aa7.69□□□□□ -1.18
SF3B1-206ENST00000462613 GPR75-ASB3A0A0A6YYF3 556 aa7.69□□□□□ -1.18
SF3B1-206ENST00000462613 MAGEB6P1A0A0J9YX57 407 aa7.69□□□□□ -1.18
SF3B1-206ENST00000462613 POTEIP0CG38 1075 aa7.69□□□□□ -1.18
SF3B1-206ENST00000462613 POTEJP0CG39 1038 aa7.69□□□□□ -1.18
SF3B1-206ENST00000462613 PDE6AP16499 860 aa7.69□□□□□ -1.18
SF3B1-206ENST00000462613 USP5P45974 858 aa7.69□□□□□ -1.18
SF3B1-206ENST00000462613 C1QTNF8P60827 252 aa7.69□□□□□ -1.18
SF3B1-206ENST00000462613 UBE3CQ15386 1083 aa7.69□□□□□ -1.18
SF3B1-206ENST00000462613 GRIK5Q16478 980 aa7.69□□□□□ -1.18
SF3B1-206ENST00000462613 USP48Q86UV5 1035 aa7.69□□□□□ -1.18
SF3B1-206ENST00000462613 FAM83AQ86UY5 434 aa7.69□□□□□ -1.18
SF3B1-206ENST00000462613 PLEKHM2Q8IWE5 1019 aa7.69□□□□□ -1.18
SF3B1-206ENST00000462613 ZSCAN29Q8IWY8 852 aaPredicted RBP7.69□□□□□ -1.18
SF3B1-206ENST00000462613 PI4K2BQ8TCG2 481 aa7.69□□□□□ -1.18
SF3B1-206ENST00000462613 OTUD7AQ8TE49 926 aaPredicted RBP7.69□□□□□ -1.18
SF3B1-206ENST00000462613 AIDAQ96BJ3 306 aa7.69□□□□□ -1.18
SF3B1-206ENST00000462613 ZBED3Q96IU2 234 aaPredicted RBP7.69□□□□□ -1.18
SF3B1-206ENST00000462613 ANTXR1Q9H6X2 564 aa7.69□□□□□ -1.18
SF3B1-206ENST00000462613 ZNF408Q9H9D4 720 aa7.69□□□□□ -1.18
SF3B1-206ENST00000462613 AATFQ9NY61 560 aaKnown RBP eCLIP7.69□□□□□ -1.18
SF3B1-206ENST00000462613 ZNF70Q9UC06 446 aaPredicted RBP7.69□□□□□ -1.18
SF3B1-206ENST00000462613 SALL3Q9BXA9 1300 aa7.69□□□□□ -1.18
SF3B1-206ENST00000462613 ZNF532Q9HCE3 1301 aa7.69□□□□□ -1.18
SF3B1-206ENST00000462613 RFX7Q2KHR2 1363 aa7.69□□□□□ -1.18
SF3B1-206ENST00000462613 PAPPA2Q9BXP8 1791 aa7.69□□□□□ -1.18
SF3B1-206ENST00000462613 TCP10L2B9ZVM9 353 aa7.68□□□□□ -1.18
SF3B1-206ENST00000462613 PPP1R12BO60237 982 aaPredicted RBP7.68□□□□□ -1.18
SF3B1-206ENST00000462613 ENTPD3O75355 529 aa7.68□□□□□ -1.18
SF3B1-206ENST00000462613 ADD2P35612 726 aa7.68□□□□□ -1.18
SF3B1-206ENST00000462613 MFAP1P55081 439 aaKnown RBP7.68□□□□□ -1.18
SF3B1-206ENST00000462613 PPP4CP60510 307 aa7.68□□□□□ -1.18
SF3B1-206ENST00000462613 TTLL12Q14166 644 aaPredicted RBP7.68□□□□□ -1.18
SF3B1-206ENST00000462613 DCAF15Q66K64 600 aa7.68□□□□□ -1.18
SF3B1-206ENST00000462613 APOBEC3HQ6NTF7 200 aaKnown RBP7.68□□□□□ -1.18
SF3B1-206ENST00000462613 CDC42EP5Q6NZY7 148 aa7.68□□□□□ -1.18
SF3B1-206ENST00000462613 TEX11Q8IYF3 940 aa7.68□□□□□ -1.18
SF3B1-206ENST00000462613 C2orf69Q8N8R5 385 aa7.68□□□□□ -1.18
SF3B1-206ENST00000462613 APPBP2Q92624 585 aa7.68□□□□□ -1.18
SF3B1-206ENST00000462613 EDC3Q96F86 508 aaKnown RBP7.68□□□□□ -1.18
SF3B1-206ENST00000462613 TRIM34Q9BYJ4 488 aa7.68□□□□□ -1.18
SF3B1-206ENST00000462613 GLIS2Q9BZE0 524 aaPredicted RBP7.68□□□□□ -1.18
SF3B1-206ENST00000462613 CRNKL1Q9BZJ0 848 aaKnown RBP7.68□□□□□ -1.18
SF3B1-206ENST00000462613 DEFB129Q9H1M3 183 aa7.68□□□□□ -1.18
SF3B1-206ENST00000462613 ATAD5Q96QE3 1844 aa7.68□□□□□ -1.18
SF3B1-206ENST00000462613 RPAP1Q9BWH6 1393 aaPredicted RBP7.68□□□□□ -1.18
SF3B1-206ENST00000462613 TMEM88BA6NKF7 163 aa7.67□□□□□ -1.18
SF3B1-206ENST00000462613 ADM5C9JUS6 153 aa7.67□□□□□ -1.18
SF3B1-206ENST00000462613 RNF113AO15541 343 aaKnown RBP7.67□□□□□ -1.18
SF3B1-206ENST00000462613 NPM3O75607 178 aaKnown RBP7.67□□□□□ -1.18
SF3B1-206ENST00000462613 CELF2O95319 508 aaKnown RBP7.67□□□□□ -1.18
SF3B1-206ENST00000462613 HLA-DOAP06340 250 aa7.67□□□□□ -1.18
SF3B1-206ENST00000462613 GNAT2P19087 354 aa7.67□□□□□ -1.18
SF3B1-206ENST00000462613 RGS3P49796 1198 aa7.67□□□□□ -1.18
SF3B1-206ENST00000462613 APLP1P51693 650 aa7.67□□□□□ -1.18
SF3B1-206ENST00000462613 FKBP1BP68106 108 aa7.67□□□□□ -1.18
SF3B1-206ENST00000462613 TCP10Q12799 353 aa7.67□□□□□ -1.18
SF3B1-206ENST00000462613 PICALMQ13492 652 aa7.67□□□□□ -1.18
SF3B1-206ENST00000462613 RASA3Q14644 834 aa7.67□□□□□ -1.18
SF3B1-206ENST00000462613 TTC22Q5TAA0 569 aa7.67□□□□□ -1.18
SF3B1-206ENST00000462613 CASC1Q6TDU7 716 aa7.67□□□□□ -1.18
SF3B1-206ENST00000462613 ARMC9Q7Z3E5 817 aa7.67□□□□□ -1.18
SF3B1-206ENST00000462613 MIGA1Q8NAN2 632 aa7.67□□□□□ -1.18
SF3B1-206ENST00000462613 FAM151AQ8WW52 585 aa7.67□□□□□ -1.18
SF3B1-206ENST00000462613 RUFY2Q8WXA3 655 aa7.67□□□□□ -1.18
SF3B1-206ENST00000462613 CDCA5Q96FF9 252 aa7.67□□□□□ -1.18
SF3B1-206ENST00000462613 IDI2Q9BXS1 227 aa7.67□□□□□ -1.18
SF3B1-206ENST00000462613 DHX36Q9H2U1 1008 aaKnown RBP7.67□□□□□ -1.18
SF3B1-206ENST00000462613 DIAPH3Q9NSV4 1193 aa7.67□□□□□ -1.18
SF3B1-206ENST00000462613 MBD4O95243 580 aa7.66□□□□□ -1.18
SF3B1-206ENST00000462613 ITGBL1O95965 494 aaPredicted RBP7.66□□□□□ -1.18
SF3B1-206ENST00000462613 IREB2P48200 963 aaKnown RBP7.66□□□□□ -1.18
SF3B1-206ENST00000462613 CACNB3P54284 484 aa7.66□□□□□ -1.18
SF3B1-206ENST00000462613 CRACR2BQ8N4Y2 399 aaPredicted RBP7.66□□□□□ -1.18
SF3B1-206ENST00000462613 TGFBRAP1Q8WUH2 860 aa7.66□□□□□ -1.18
SF3B1-206ENST00000462613 NACAP1Q9BZK3 213 aa7.66□□□□□ -1.18
SF3B1-206ENST00000462613 GBA2Q9HCG7 927 aaPredicted RBP7.66□□□□□ -1.18
SF3B1-206ENST00000462613 ABT1Q9ULW3 272 aaKnown RBP7.66□□□□□ -1.18
SF3B1-206ENST00000462613 PCDHAC2Q9Y5I4 1007 aa7.66□□□□□ -1.18
SF3B1-206ENST00000462613 ASTN2O75129 1339 aaPredicted RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms