RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 VWA3AA6NCI4 1184 aa13.54□□□□□ -0.24
PDZRN3-203ENST00000462146 MYL5Q02045 173 aa13.54□□□□□ -0.24
PDZRN3-203ENST00000462146 CYB5R4Q7L1T6 521 aa13.54□□□□□ -0.24
PDZRN3-203ENST00000462146 RALYLQ86SE5 291 aaKnown RBP13.54□□□□□ -0.24
PDZRN3-203ENST00000462146 TMEM139Q8IV31 216 aa13.54□□□□□ -0.24
PDZRN3-203ENST00000462146 HPSEQ9Y251 543 aa13.54□□□□□ -0.24
PDZRN3-203ENST00000462146 GPAA1O43292 621 aa13.54□□□□□ -0.24
PDZRN3-203ENST00000462146 DHX16O60231 1041 aaKnown RBP13.54□□□□□ -0.24
PDZRN3-203ENST00000462146 ZRANB2O95218 330 aaKnown RBP eCLIP13.54□□□□□ -0.24
PDZRN3-203ENST00000462146 BMP6P22004 513 aa13.54□□□□□ -0.24
PDZRN3-203ENST00000462146 PTPAQ15257 358 aa13.54□□□□□ -0.24
PDZRN3-203ENST00000462146 LONRF3Q496Y0 759 aa13.54□□□□□ -0.24
PDZRN3-203ENST00000462146 VSTM4Q8IW00 320 aa13.54□□□□□ -0.24
PDZRN3-203ENST00000462146 UBXN4Q92575 508 aa13.54□□□□□ -0.24
PDZRN3-203ENST00000462146 NRDCO43847 1150 aa13.53□□□□□ -0.24
PDZRN3-203ENST00000462146 TADA3O75528 432 aa13.53□□□□□ -0.24
PDZRN3-203ENST00000462146 KRT40Q6A162 431 aa13.53□□□□□ -0.24
PDZRN3-203ENST00000462146 TBC1D10CQ8IV04 446 aa13.53□□□□□ -0.24
PDZRN3-203ENST00000462146 MYL10Q9BUA6 226 aa13.53□□□□□ -0.24
PDZRN3-203ENST00000462146 ALS2Q96Q42 1657 aa13.53□□□□□ -0.24
PDZRN3-203ENST00000462146 ZNF213O14771 459 aa13.53□□□□□ -0.24
PDZRN3-203ENST00000462146 MNS1Q8NEH6 495 aa13.53□□□□□ -0.24
PDZRN3-203ENST00000462146 WDR24Q96S15 920 aa13.53□□□□□ -0.24
PDZRN3-203ENST00000462146 INCENPQ9NQS7 918 aa13.53□□□□□ -0.24
PDZRN3-203ENST00000462146 CEP126Q9P2H0 1117 aa13.53□□□□□ -0.24
PDZRN3-203ENST00000462146 COL18A1P39060 1754 aa13.53□□□□□ -0.24
PDZRN3-203ENST00000462146 AKAP11Q9UKA4 1901 aa13.53□□□□□ -0.24
PDZRN3-203ENST00000462146 POLR3GO15318 223 aaPredicted RBP13.53□□□□□ -0.24
PDZRN3-203ENST00000462146 TOP1P11387 765 aaKnown RBP13.53□□□□□ -0.24
PDZRN3-203ENST00000462146 MICU3Q86XE3 530 aa13.53□□□□□ -0.24
PDZRN3-203ENST00000462146 MAP3K14Q99558 947 aa13.53□□□□□ -0.24
PDZRN3-203ENST00000462146 CPDO75976 1380 aa13.52□□□□□ -0.24
PDZRN3-203ENST00000462146 SASH3O75995 380 aa13.52□□□□□ -0.24
PDZRN3-203ENST00000462146 CCDC158Q5M9N0 1113 aa13.52□□□□□ -0.24
PDZRN3-203ENST00000462146 TAF3Q5VWG9 929 aa13.52□□□□□ -0.24
PDZRN3-203ENST00000462146 STK11IPQ8N1F8 1099 aa13.52□□□□□ -0.24
PDZRN3-203ENST00000462146 PCDHA5Q9Y5H7 936 aa13.52□□□□□ -0.24
PDZRN3-203ENST00000462146 PKD1L3Q7Z443 1732 aa13.52□□□□□ -0.25
PDZRN3-203ENST00000462146 METAP2P50579 478 aaKnown RBP eCLIP13.52□□□□□ -0.25
PDZRN3-203ENST00000462146 GRIN1Q05586 938 aa13.52□□□□□ -0.25
PDZRN3-203ENST00000462146 TMCO3Q6UWJ1 677 aa13.52□□□□□ -0.25
PDZRN3-203ENST00000462146 TOGARAM2Q6ZUX3 1019 aa13.52□□□□□ -0.25
PDZRN3-203ENST00000462146 APPBP2Q92624 585 aa13.52□□□□□ -0.25
PDZRN3-203ENST00000462146 PPP2R2CQ9Y2T4 447 aa13.52□□□□□ -0.25
PDZRN3-203ENST00000462146 ADKP55263 362 aaKnown RBP13.51□□□□□ -0.25
PDZRN3-203ENST00000462146 GNL2Q13823 731 aaKnown RBP13.51□□□□□ -0.25
PDZRN3-203ENST00000462146 ZNF827Q17R98 1081 aa13.51□□□□□ -0.25
PDZRN3-203ENST00000462146 RESP18Q5W5W9 173 aa13.51□□□□□ -0.25
PDZRN3-203ENST00000462146 PDILTQ8N807 584 aa13.51□□□□□ -0.25
PDZRN3-203ENST00000462146 CHMP4CQ96CF2 233 aa13.51□□□□□ -0.25
PDZRN3-203ENST00000462146 TIGD1Q96MW7 591 aa13.51□□□□□ -0.25
PDZRN3-203ENST00000462146 ZMYM6O95789 1325 aa13.51□□□□□ -0.25
PDZRN3-203ENST00000462146 RANBP6O60518 1105 aaKnown RBP13.51□□□□□ -0.25
PDZRN3-203ENST00000462146 CIAO1O76071 339 aa13.51□□□□□ -0.25
PDZRN3-203ENST00000462146 CYP2C19P33261 490 aa13.51□□□□□ -0.25
PDZRN3-203ENST00000462146 TRMT44Q8IYL2 757 aaKnown RBP13.51□□□□□ -0.25
PDZRN3-203ENST00000462146 TRERF1Q96PN7 1200 aa13.51□□□□□ -0.25
PDZRN3-203ENST00000462146 ZNF330Q9Y3S2 320 aaPredicted RBP13.51□□□□□ -0.25
PDZRN3-203ENST00000462146 CCDC66A2RUB6 948 aa13.5□□□□□ -0.25
PDZRN3-203ENST00000462146 PRR29P0C7W0 189 aa13.5□□□□□ -0.25
PDZRN3-203ENST00000462146 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.5□□□□□ -0.25
PDZRN3-203ENST00000462146 ZBTB9Q96C00 473 aa13.5□□□□□ -0.25
PDZRN3-203ENST00000462146 DESI2Q9BSY9 194 aa13.5□□□□□ -0.25
PDZRN3-203ENST00000462146 ZCCHC17Q9NP64 241 aaKnown RBP13.5□□□□□ -0.25
PDZRN3-203ENST00000462146 B4E1Z4 1266 aa13.5□□□□□ -0.25
PDZRN3-203ENST00000462146 CBFA2T2O43439 604 aa13.5□□□□□ -0.25
PDZRN3-203ENST00000462146 PPP6R2O75170 966 aa13.5□□□□□ -0.25
PDZRN3-203ENST00000462146 FMR1Q06787 632 aaKnown RBP eCLIP13.5□□□□□ -0.25
PDZRN3-203ENST00000462146 KRBA2Q6ZNG9 492 aa13.5□□□□□ -0.25
PDZRN3-203ENST00000462146 GRAMD1CQ8IYS0 662 aa13.5□□□□□ -0.25
PDZRN3-203ENST00000462146 CNNM3Q8NE01 707 aa13.5□□□□□ -0.25
PDZRN3-203ENST00000462146 ANGEL1Q9UNK9 670 aaKnown RBP13.5□□□□□ -0.25
PDZRN3-203ENST00000462146 TMEM94Q12767 1356 aa13.5□□□□□ -0.25
PDZRN3-203ENST00000462146 SH2B2O14492 632 aaPredicted RBP13.5□□□□□ -0.25
PDZRN3-203ENST00000462146 MCAMP43121 646 aa13.5□□□□□ -0.25
PDZRN3-203ENST00000462146 CCDC57Q2TAC2 916 aa13.5□□□□□ -0.25
PDZRN3-203ENST00000462146 APOA5Q6Q788 366 aa13.5□□□□□ -0.25
PDZRN3-203ENST00000462146 OLFM4Q6UX06 510 aa13.5□□□□□ -0.25
PDZRN3-203ENST00000462146 AEBP2Q6ZN18 517 aaPredicted RBP13.5□□□□□ -0.25
PDZRN3-203ENST00000462146 SYNE4Q8N205 404 aa13.5□□□□□ -0.25
PDZRN3-203ENST00000462146 NEK11Q8NG66 645 aa13.5□□□□□ -0.25
PDZRN3-203ENST00000462146 CCDC34Q96HJ3 373 aa13.5□□□□□ -0.25
PDZRN3-203ENST00000462146 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.5□□□□□ -0.25
PDZRN3-203ENST00000462146 CHD4Q14839 1912 aa13.49□□□□□ -0.25
PDZRN3-203ENST00000462146 CCP110O43303 1012 aa13.49□□□□□ -0.25
PDZRN3-203ENST00000462146 GNG11P61952 73 aa13.49□□□□□ -0.25
PDZRN3-203ENST00000462146 IRX5P78411 483 aaPredicted RBP13.49□□□□□ -0.25
PDZRN3-203ENST00000462146 LRRFIP1Q32MZ4 808 aaKnown RBP13.49□□□□□ -0.25
PDZRN3-203ENST00000462146 TEX35Q5T0J7 233 aa13.49□□□□□ -0.25
PDZRN3-203ENST00000462146 CCDC191Q8NCU4 936 aa13.49□□□□□ -0.25
PDZRN3-203ENST00000462146 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.49□□□□□ -0.25
PDZRN3-203ENST00000462146 KCNH3Q9ULD8 1083 aa13.49□□□□□ -0.25
PDZRN3-203ENST00000462146 EFCAB8A8MWE9 144 aa13.49□□□□□ -0.25
PDZRN3-203ENST00000462146 TBC1D8O95759 1140 aa13.49□□□□□ -0.25
PDZRN3-203ENST00000462146 ZFYP08048 801 aaPredicted RBP13.49□□□□□ -0.25
PDZRN3-203ENST00000462146 ST5P78524 1137 aa13.49□□□□□ -0.25
PDZRN3-203ENST00000462146 MTF1Q14872 753 aa13.49□□□□□ -0.25
PDZRN3-203ENST00000462146 KARSQ15046 597 aaKnown RBP13.49□□□□□ -0.25
PDZRN3-203ENST00000462146 FAM89AQ96GI7 184 aa13.49□□□□□ -0.25
PDZRN3-203ENST00000462146 BAG1Q99933 345 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms