RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 TOP1P11387 765 aaKnown RBP17.84■□□□□ 0.45
SSR4-206ENST00000460616 GOLGA8FQ08AF8 430 aa17.84■□□□□ 0.45
SSR4-206ENST00000460616 GOLGA8DPQ0D2H9 430 aa17.84■□□□□ 0.45
SSR4-206ENST00000460616 MCMDC2Q4G0Z9 681 aa17.84■□□□□ 0.45
SSR4-206ENST00000460616 ATG3Q9NT62 314 aa17.84■□□□□ 0.45
SSR4-206ENST00000460616 RGS17Q9UGC6 210 aaPredicted RBP17.84■□□□□ 0.45
SSR4-206ENST00000460616 MRFAP1Q9Y605 127 aa17.84■□□□□ 0.45
SSR4-206ENST00000460616 BRWD3Q6RI45 1802 aa17.84■□□□□ 0.45
SSR4-206ENST00000460616 SALL1Q9NSC2 1324 aa17.84■□□□□ 0.45
SSR4-206ENST00000460616 LONRF2Q1L5Z9 754 aa17.83■□□□□ 0.45
SSR4-206ENST00000460616 JAKMIP3Q5VZ66 844 aa17.83■□□□□ 0.45
SSR4-206ENST00000460616 GOLGA6L9A6NEM1 432 aa17.83■□□□□ 0.44
SSR4-206ENST00000460616 SPTLC2O15270 562 aa17.83■□□□□ 0.44
SSR4-206ENST00000460616 DHX16O60231 1041 aaKnown RBP17.83■□□□□ 0.44
SSR4-206ENST00000460616 CHGBP05060 677 aa17.83■□□□□ 0.44
SSR4-206ENST00000460616 VSTM4Q8IW00 320 aa17.83■□□□□ 0.44
SSR4-206ENST00000460616 IQUBQ8NA54 791 aa17.83■□□□□ 0.44
SSR4-206ENST00000460616 MARCH10Q8NA82 808 aaPredicted RBP17.83■□□□□ 0.44
SSR4-206ENST00000460616 KLHDC4Q8TBB5 520 aa17.83■□□□□ 0.44
SSR4-206ENST00000460616 GOLGA1Q92805 767 aa17.83■□□□□ 0.44
SSR4-206ENST00000460616 H3BQF6 201 aa17.82■□□□□ 0.44
SSR4-206ENST00000460616 POLR3DP05423 398 aaPredicted RBP17.82■□□□□ 0.44
SSR4-206ENST00000460616 ATP5JP18859 108 aa17.82■□□□□ 0.44
SSR4-206ENST00000460616 TEFQ10587 303 aa17.82■□□□□ 0.44
SSR4-206ENST00000460616 FAM182BQ5T319 152 aa17.82■□□□□ 0.44
SSR4-206ENST00000460616 DCAF5Q96JK2 942 aa17.82■□□□□ 0.44
SSR4-206ENST00000460616 CDCA7Q9BWT1 371 aaPredicted RBP17.82■□□□□ 0.44
SSR4-206ENST00000460616 MRC1P22897 1456 aa17.82■□□□□ 0.44
SSR4-206ENST00000460616 TXLNAP40222 546 aa17.82■□□□□ 0.44
SSR4-206ENST00000460616 EXOSC10Q01780 885 aaKnown RBP17.82■□□□□ 0.44
SSR4-206ENST00000460616 CTR9Q6PD62 1173 aa17.82■□□□□ 0.44
SSR4-206ENST00000460616 LEKR1Q6ZMV7 388 aa17.82■□□□□ 0.44
SSR4-206ENST00000460616 ZFP91Q96JP5 570 aaPredicted RBP17.82■□□□□ 0.44
SSR4-206ENST00000460616 NDUFB9Q9Y6M9 179 aa17.82■□□□□ 0.44
SSR4-206ENST00000460616 CCDC151A5D8V7 595 aa17.81■□□□□ 0.44
SSR4-206ENST00000460616 YEATS4O95619 227 aa17.81■□□□□ 0.44
SSR4-206ENST00000460616 PDIA3P30101 505 aaKnown RBP17.81■□□□□ 0.44
SSR4-206ENST00000460616 LINS1Q8NG48 757 aa17.81■□□□□ 0.44
SSR4-206ENST00000460616 POLR3EQ9NVU0 708 aa17.81■□□□□ 0.44
SSR4-206ENST00000460616 EP400Q96L91 3159 aa17.81■□□□□ 0.44
SSR4-206ENST00000460616 CARMIL3Q8ND23 1372 aa17.81■□□□□ 0.44
SSR4-206ENST00000460616 BTBD11A6QL63 1104 aa17.81■□□□□ 0.44
SSR4-206ENST00000460616 MAP2K7O14733 419 aa17.81■□□□□ 0.44
SSR4-206ENST00000460616 MYL5Q02045 173 aa17.81■□□□□ 0.44
SSR4-206ENST00000460616 TMEM139Q8IV31 216 aa17.81■□□□□ 0.44
SSR4-206ENST00000460616 CHMP4CQ96CF2 233 aa17.81■□□□□ 0.44
SSR4-206ENST00000460616 AGXT2Q9BYV1 514 aa17.81■□□□□ 0.44
SSR4-206ENST00000460616 FDPSP14324 419 aaKnown RBP17.8■□□□□ 0.44
SSR4-206ENST00000460616 BRD3Q15059 726 aa17.8■□□□□ 0.44
SSR4-206ENST00000460616 NKX1-1Q15270 411 aaPredicted RBP17.8■□□□□ 0.44
SSR4-206ENST00000460616 PTPN21Q16825 1174 aa17.8■□□□□ 0.44
SSR4-206ENST00000460616 PROSER3Q2NL68 480 aa17.8■□□□□ 0.44
SSR4-206ENST00000460616 GOLGA6L1Q8N7Z2 621 aa17.8■□□□□ 0.44
SSR4-206ENST00000460616 ZNF274Q96GC6 653 aaPredicted RBP17.8■□□□□ 0.44
SSR4-206ENST00000460616 BAG1Q99933 345 aaPredicted RBP17.8■□□□□ 0.44
SSR4-206ENST00000460616 ZNF609O15014 1411 aa17.8■□□□□ 0.44
SSR4-206ENST00000460616 TMEM232C9JQI7 657 aa17.8■□□□□ 0.44
SSR4-206ENST00000460616 IVLP07476 585 aa17.8■□□□□ 0.44
SSR4-206ENST00000460616 PFKFB1P16118 471 aa17.8■□□□□ 0.44
SSR4-206ENST00000460616 TAF7LQ5H9L4 462 aa17.8■□□□□ 0.44
SSR4-206ENST00000460616 OTUD7BQ6GQQ9 843 aa17.8■□□□□ 0.44
SSR4-206ENST00000460616 SLC52A2Q9HAB3 445 aa17.8■□□□□ 0.44
SSR4-206ENST00000460616 CMA1P23946 247 aa17.79■□□□□ 0.44
SSR4-206ENST00000460616 NOM1Q5C9Z4 860 aaKnown RBP17.79■□□□□ 0.44
SSR4-206ENST00000460616 VPS18Q9P253 973 aa17.79■□□□□ 0.44
SSR4-206ENST00000460616 UTYO14607 1347 aa17.79■□□□□ 0.44
SSR4-206ENST00000460616 SLC39A6Q13433 755 aa17.79■□□□□ 0.44
SSR4-206ENST00000460616 ZNF772Q68DY9 489 aaPredicted RBP17.79■□□□□ 0.44
SSR4-206ENST00000460616 SYNE3Q6ZMZ3 975 aa17.79■□□□□ 0.44
SSR4-206ENST00000460616 KIFC2Q96AC6 838 aa17.79■□□□□ 0.44
SSR4-206ENST00000460616 DHX58Q96C10 678 aa17.79■□□□□ 0.44
SSR4-206ENST00000460616 DBNLQ9UJU6 430 aaKnown RBP17.79■□□□□ 0.44
SSR4-206ENST00000460616 MYH15Q9Y2K3 1946 aa17.78■□□□□ 0.44
SSR4-206ENST00000460616 SEPT12Q8IYM1 358 aa17.78■□□□□ 0.44
SSR4-206ENST00000460616 STX10O60499 249 aa17.78■□□□□ 0.44
SSR4-206ENST00000460616 MCM6Q14566 821 aa17.78■□□□□ 0.44
SSR4-206ENST00000460616 AXDND1Q5T1B0 1012 aaPredicted RBP17.78■□□□□ 0.44
SSR4-206ENST00000460616 PDILTQ8N807 584 aa17.78■□□□□ 0.44
SSR4-206ENST00000460616 C8orf76Q96K31 380 aa17.78■□□□□ 0.44
SSR4-206ENST00000460616 PDE11AQ9HCR9 933 aa17.78■□□□□ 0.44
SSR4-206ENST00000460616 TUBE1Q9UJT0 475 aa17.78■□□□□ 0.44
SSR4-206ENST00000460616 GTF2A1P52655 376 aaPredicted RBP17.77■□□□□ 0.44
SSR4-206ENST00000460616 CABP4P57796 275 aa17.77■□□□□ 0.44
SSR4-206ENST00000460616 MYSM1Q5VVJ2 828 aa17.77■□□□□ 0.44
SSR4-206ENST00000460616 POTEAQ6S8J7 498 aa17.77■□□□□ 0.44
SSR4-206ENST00000460616 TOGARAM2Q6ZUX3 1019 aa17.77■□□□□ 0.44
SSR4-206ENST00000460616 CHST3Q7LGC8 479 aa17.77■□□□□ 0.44
SSR4-206ENST00000460616 ZBTB9Q96C00 473 aa17.77■□□□□ 0.44
SSR4-206ENST00000460616 ACSBG1Q96GR2 724 aa17.77■□□□□ 0.44
SSR4-206ENST00000460616 FANCLQ9NW38 375 aa17.77■□□□□ 0.44
SSR4-206ENST00000460616 HDXQ7Z353 690 aa17.77■□□□□ 0.43
SSR4-206ENST00000460616 HNRNPLLQ8WVV9 542 aaKnown RBP17.77■□□□□ 0.43
SSR4-206ENST00000460616 ZSWIM4Q9H7M6 989 aa17.77■□□□□ 0.43
SSR4-206ENST00000460616 E7EWF7 191 aa17.76■□□□□ 0.43
SSR4-206ENST00000460616 MYO1BO43795 1136 aa17.76■□□□□ 0.43
SSR4-206ENST00000460616 ONECUT3O60422 494 aaPredicted RBP17.76■□□□□ 0.43
SSR4-206ENST00000460616 ICE2Q659A1 982 aa17.76■□□□□ 0.43
SSR4-206ENST00000460616 OLFM4Q6UX06 510 aa17.76■□□□□ 0.43
SSR4-206ENST00000460616 DDX46Q7L014 1031 aaKnown RBP17.76■□□□□ 0.43
SSR4-206ENST00000460616 CCDC12Q8WUD4 166 aaPredicted RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms