RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 CELF2O95319 508 aaKnown RBP12.34□□□□□ -0.43
RFX3-210ENST00000457373 HDLBPQ00341 1268 aaKnown RBP12.34□□□□□ -0.43
RFX3-210ENST00000457373 PRAMEF18Q5VWM3 479 aa12.34□□□□□ -0.43
RFX3-210ENST00000457373 VEZTQ9HBM0 779 aa12.34□□□□□ -0.43
RFX3-210ENST00000457373 PCDHB8Q9UN66 801 aa12.34□□□□□ -0.43
RFX3-210ENST00000457373 PCDHB13Q9Y5F0 798 aa12.34□□□□□ -0.43
RFX3-210ENST00000457373 AKAP11Q9UKA4 1901 aa12.34□□□□□ -0.43
RFX3-210ENST00000457373 AOX1Q06278 1338 aa12.34□□□□□ -0.43
RFX3-210ENST00000457373 PITPNM2Q9BZ72 1349 aa12.34□□□□□ -0.43
RFX3-210ENST00000457373 MYH2Q9UKX2 1941 aa12.33□□□□□ -0.44
RFX3-210ENST00000457373 ZAP70P43403 619 aa12.33□□□□□ -0.44
RFX3-210ENST00000457373 DIXDC1Q155Q3 683 aa12.33□□□□□ -0.44
RFX3-210ENST00000457373 CST9Q5W186 159 aa12.33□□□□□ -0.44
RFX3-210ENST00000457373 SPTY2D1Q68D10 685 aaPredicted RBP12.33□□□□□ -0.44
RFX3-210ENST00000457373 HHIPL2Q6UWX4 724 aa12.33□□□□□ -0.44
RFX3-210ENST00000457373 APOBEC3FQ8IUX4 373 aaKnown RBP12.33□□□□□ -0.44
RFX3-210ENST00000457373 CDCA5Q96FF9 252 aa12.33□□□□□ -0.44
RFX3-210ENST00000457373 MRIQ9BWK5 157 aa12.33□□□□□ -0.44
RFX3-210ENST00000457373 RAI14Q9P0K7 980 aa12.33□□□□□ -0.44
RFX3-210ENST00000457373 ZNF70Q9UC06 446 aaPredicted RBP12.33□□□□□ -0.44
RFX3-210ENST00000457373 MYO5AQ9Y4I1 1855 aaKnown RBP12.33□□□□□ -0.44
RFX3-210ENST00000457373 PDS5AQ29RF7 1337 aaKnown RBP12.33□□□□□ -0.44
RFX3-210ENST00000457373 AAMPQ13685 434 aa12.32□□□□□ -0.44
RFX3-210ENST00000457373 DZIP1Q86YF9 867 aaKnown RBP12.32□□□□□ -0.44
RFX3-210ENST00000457373 ZNF512BQ96KM6 892 aaPredicted RBP12.32□□□□□ -0.44
RFX3-210ENST00000457373 LRP2BPQ9P2M1 347 aa12.32□□□□□ -0.44
RFX3-210ENST00000457373 ABT1Q9ULW3 272 aaKnown RBP12.32□□□□□ -0.44
RFX3-210ENST00000457373 NDUFB9Q9Y6M9 179 aa12.32□□□□□ -0.44
RFX3-210ENST00000457373 TCP10L2B9ZVM9 353 aa12.31□□□□□ -0.44
RFX3-210ENST00000457373 CYP2E1P05181 493 aaPredicted RBP12.31□□□□□ -0.44
RFX3-210ENST00000457373 ZDHHC15Q96MV8 337 aa12.31□□□□□ -0.44
RFX3-210ENST00000457373 MKRN1Q9UHC7 482 aaKnown RBP12.31□□□□□ -0.44
RFX3-210ENST00000457373 DAGLAQ9Y4D2 1042 aa12.31□□□□□ -0.44
RFX3-210ENST00000457373 CACNB3P54284 484 aa12.3□□□□□ -0.44
RFX3-210ENST00000457373 MECOMQ03112 1051 aa12.3□□□□□ -0.44
RFX3-210ENST00000457373 HDAC1Q13547 482 aaPredicted RBP12.3□□□□□ -0.44
RFX3-210ENST00000457373 PRKG1Q13976 671 aa12.3□□□□□ -0.44
RFX3-210ENST00000457373 ANKRD45Q5TZF3 282 aa12.3□□□□□ -0.44
RFX3-210ENST00000457373 APOBEC3HQ6NTF7 200 aaKnown RBP12.3□□□□□ -0.44
RFX3-210ENST00000457373 SLF2Q8IX21 1173 aa12.3□□□□□ -0.44
RFX3-210ENST00000457373 DNAJC2Q99543 621 aaKnown RBP12.3□□□□□ -0.44
RFX3-210ENST00000457373 DEFB129Q9H1M3 183 aa12.3□□□□□ -0.44
RFX3-210ENST00000457373 BOLA2Q9H3K6 86 aa12.3□□□□□ -0.44
RFX3-210ENST00000457373 RWDD1Q9H446 243 aaPredicted RBP12.3□□□□□ -0.44
RFX3-210ENST00000457373 ANTXR1Q9H6X2 564 aa12.3□□□□□ -0.44
RFX3-210ENST00000457373 GBA2Q9HCG7 927 aaPredicted RBP12.3□□□□□ -0.44
RFX3-210ENST00000457373 PIH1D3Q9NQM4 214 aaKnown RBP12.3□□□□□ -0.44
RFX3-210ENST00000457373 TMOD2Q9NZR1 351 aa12.3□□□□□ -0.44
RFX3-210ENST00000457373 IGHDP01880 384 aa12.29□□□□□ -0.44
RFX3-210ENST00000457373 LDHCP07864 332 aa12.29□□□□□ -0.44
RFX3-210ENST00000457373 TNNI2P48788 182 aa12.29□□□□□ -0.44
RFX3-210ENST00000457373 PSEN1P49768 467 aa12.29□□□□□ -0.44
RFX3-210ENST00000457373 TTLL12Q14166 644 aaPredicted RBP12.29□□□□□ -0.44
RFX3-210ENST00000457373 RASA3Q14644 834 aa12.29□□□□□ -0.44
RFX3-210ENST00000457373 DEFB115Q30KQ5 88 aa12.29□□□□□ -0.44
RFX3-210ENST00000457373 C2orf69Q8N8R5 385 aa12.29□□□□□ -0.44
RFX3-210ENST00000457373 NSUN4Q96CB9 384 aaKnown RBP12.29□□□□□ -0.44
RFX3-210ENST00000457373 GCC1Q96CN9 775 aa12.29□□□□□ -0.44
RFX3-210ENST00000457373 USP40Q9NVE5 1235 aa12.29□□□□□ -0.44
RFX3-210ENST00000457373 AK9Q5TCS8 1911 aa12.29□□□□□ -0.44
RFX3-210ENST00000457373 PPP1R37O75864 691 aa12.28□□□□□ -0.44
RFX3-210ENST00000457373 IDH1O75874 414 aaKnown RBP12.28□□□□□ -0.44
RFX3-210ENST00000457373 NF2P35240 595 aa12.28□□□□□ -0.44
RFX3-210ENST00000457373 BTDP43251 543 aa12.28□□□□□ -0.44
RFX3-210ENST00000457373 GSTO1P78417 241 aa12.28□□□□□ -0.44
RFX3-210ENST00000457373 GRM1Q13255 1194 aa12.28□□□□□ -0.44
RFX3-210ENST00000457373 TNFAIP1Q13829 316 aa12.28□□□□□ -0.44
RFX3-210ENST00000457373 CDC42EP5Q6NZY7 148 aa12.28□□□□□ -0.44
RFX3-210ENST00000457373 DNAJC5GQ8N7S2 189 aa12.28□□□□□ -0.44
RFX3-210ENST00000457373 ZNF384Q8TF68 577 aa12.28□□□□□ -0.44
RFX3-210ENST00000457373 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.28□□□□□ -0.44
RFX3-210ENST00000457373 TLL2Q9Y6L7 1015 aa12.28□□□□□ -0.44
RFX3-210ENST00000457373 MROH7-TTC4A0A0A0MT08 1334 aa12.28□□□□□ -0.44
RFX3-210ENST00000457373 GOLIM4O00461 696 aa12.27□□□□□ -0.45
RFX3-210ENST00000457373 ATP5JP18859 108 aa12.27□□□□□ -0.45
RFX3-210ENST00000457373 HUNKP57058 714 aa12.27□□□□□ -0.45
RFX3-210ENST00000457373 NBPF12Q5TAG4 269 aaPredicted RBP12.27□□□□□ -0.45
RFX3-210ENST00000457373 B4GALNT3Q6L9W6 998 aa12.27□□□□□ -0.45
RFX3-210ENST00000457373 NAA16Q6N069 864 aaPredicted RBP12.27□□□□□ -0.45
RFX3-210ENST00000457373 MOB2Q70IA6 237 aa12.27□□□□□ -0.45
RFX3-210ENST00000457373 SAPCD2Q86UD0 394 aa12.27□□□□□ -0.45
RFX3-210ENST00000457373 KLRG1Q96E93 195 aa12.27□□□□□ -0.45
RFX3-210ENST00000457373 FAM163AQ96GL9 167 aaPredicted RBP12.27□□□□□ -0.45
RFX3-210ENST00000457373 ECHDC1Q9NTX5 307 aa12.27□□□□□ -0.45
RFX3-210ENST00000457373 FZD1Q9UP38 647 aa12.27□□□□□ -0.45
RFX3-210ENST00000457373 PPP2R3BQ9Y5P8 575 aa12.27□□□□□ -0.45
RFX3-210ENST00000457373 GAKO14976 1311 aa12.27□□□□□ -0.45
RFX3-210ENST00000457373 DOCK2Q92608 1830 aa12.26□□□□□ -0.45
RFX3-210ENST00000457373 GPR75-ASB3A0A0A6YYF3 556 aa12.26□□□□□ -0.45
RFX3-210ENST00000457373 RASSF10A6NK89 507 aa12.26□□□□□ -0.45
RFX3-210ENST00000457373 UBE2Q2LH0YL09 131 aa12.26□□□□□ -0.45
RFX3-210ENST00000457373 TCP10Q12799 353 aa12.26□□□□□ -0.45
RFX3-210ENST00000457373 TTF1Q15361 905 aaPredicted RBP12.26□□□□□ -0.45
RFX3-210ENST00000457373 TSHZ3Q63HK5 1081 aa12.26□□□□□ -0.45
RFX3-210ENST00000457373 CYP4F22Q6NT55 531 aa12.26□□□□□ -0.45
RFX3-210ENST00000457373 ZNF579Q8NAF0 562 aaKnown RBP12.26□□□□□ -0.45
RFX3-210ENST00000457373 EDC3Q96F86 508 aaKnown RBP12.26□□□□□ -0.45
RFX3-210ENST00000457373 NOL10Q9BSC4 688 aaKnown RBP12.26□□□□□ -0.45
RFX3-210ENST00000457373 TMEM39BQ9GZU3 492 aa12.26□□□□□ -0.45
RFX3-210ENST00000457373 CNTNAP1P78357 1384 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms