RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 TRAF5O00463 557 aa18.74■□□□□ 0.59
TRAPPC12-203ENST00000411973 CDC42EP5Q6NZY7 148 aa18.74■□□□□ 0.59
TRAPPC12-203ENST00000411973 CENPQQ7L2Z9 268 aaPredicted RBP18.74■□□□□ 0.59
TRAPPC12-203ENST00000411973 MAP4K4O95819 1239 aaPredicted RBP18.73■□□□□ 0.59
TRAPPC12-203ENST00000411973 BTDP43251 543 aa18.73■□□□□ 0.59
TRAPPC12-203ENST00000411973 TNFAIP1Q13829 316 aa18.73■□□□□ 0.59
TRAPPC12-203ENST00000411973 PLEKHM2Q8IWE5 1019 aa18.73■□□□□ 0.59
TRAPPC12-203ENST00000411973 DEFB129Q9H1M3 183 aa18.73■□□□□ 0.59
TRAPPC12-203ENST00000411973 VEZTQ9HBM0 779 aa18.73■□□□□ 0.59
TRAPPC12-203ENST00000411973 PPP2R3BQ9Y5P8 575 aa18.73■□□□□ 0.59
TRAPPC12-203ENST00000411973 APLP1P51693 650 aa18.72■□□□□ 0.59
TRAPPC12-203ENST00000411973 PPP4CP60510 307 aa18.72■□□□□ 0.59
TRAPPC12-203ENST00000411973 SLC9C2Q5TAH2 1124 aa18.72■□□□□ 0.59
TRAPPC12-203ENST00000411973 ADGRA1Q86SQ6 560 aa18.72■□□□□ 0.59
TRAPPC12-203ENST00000411973 MAGEB6Q8N7X4 407 aa18.72■□□□□ 0.59
TRAPPC12-203ENST00000411973 CCDC136Q96JN2 1154 aa18.72■□□□□ 0.59
TRAPPC12-203ENST00000411973 USP40Q9NVE5 1235 aa18.72■□□□□ 0.59
TRAPPC12-203ENST00000411973 TMOD2Q9NZR1 351 aa18.72■□□□□ 0.59
TRAPPC12-203ENST00000411973 SCAF8Q9UPN6 1271 aaKnown RBP18.72■□□□□ 0.59
TRAPPC12-203ENST00000411973 PDE6AP16499 860 aa18.71■□□□□ 0.59
TRAPPC12-203ENST00000411973 HSPA6P17066 643 aa18.71■□□□□ 0.59
TRAPPC12-203ENST00000411973 CYP7A1P22680 504 aa18.71■□□□□ 0.59
TRAPPC12-203ENST00000411973 RHBDL3P58872 404 aa18.71■□□□□ 0.59
TRAPPC12-203ENST00000411973 FMR1Q06787 632 aaKnown RBP eCLIP18.71■□□□□ 0.59
TRAPPC12-203ENST00000411973 DLK2Q6UY11 383 aa18.71■□□□□ 0.59
TRAPPC12-203ENST00000411973 FAM83AQ86UY5 434 aa18.71■□□□□ 0.59
TRAPPC12-203ENST00000411973 KBTBD3Q8NAB2 608 aa18.71■□□□□ 0.59
TRAPPC12-203ENST00000411973 CDCA5Q96FF9 252 aa18.71■□□□□ 0.59
TRAPPC12-203ENST00000411973 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.71■□□□□ 0.59
TRAPPC12-203ENST00000411973 TCRBV5S4A2TA0A5A2 114 aa18.7■□□□□ 0.58
TRAPPC12-203ENST00000411973 BAG3O95817 575 aa18.7■□□□□ 0.58
TRAPPC12-203ENST00000411973 PDE4AP27815 886 aa18.7■□□□□ 0.58
TRAPPC12-203ENST00000411973 TNNI2P48788 182 aa18.7■□□□□ 0.58
TRAPPC12-203ENST00000411973 RASA3Q14644 834 aa18.7■□□□□ 0.58
TRAPPC12-203ENST00000411973 CST9Q5W186 159 aa18.7■□□□□ 0.58
TRAPPC12-203ENST00000411973 IDI2Q9BXS1 227 aa18.7■□□□□ 0.58
TRAPPC12-203ENST00000411973 CNTNAP1P78357 1384 aa18.69■□□□□ 0.58
TRAPPC12-203ENST00000411973 RFX7Q2KHR2 1363 aa18.69■□□□□ 0.58
TRAPPC12-203ENST00000411973 TCP10L2B9ZVM9 353 aa18.69■□□□□ 0.58
TRAPPC12-203ENST00000411973 PLCG2P16885 1265 aa18.69■□□□□ 0.58
TRAPPC12-203ENST00000411973 ADD2P35612 726 aa18.69■□□□□ 0.58
TRAPPC12-203ENST00000411973 CACNB3P54284 484 aa18.69■□□□□ 0.58
TRAPPC12-203ENST00000411973 UBE3CQ15386 1083 aa18.69■□□□□ 0.58
TRAPPC12-203ENST00000411973 ZSCAN25Q6NSZ9 544 aa18.69■□□□□ 0.58
TRAPPC12-203ENST00000411973 CERS3Q8IU89 383 aa18.69■□□□□ 0.58
TRAPPC12-203ENST00000411973 NOL10Q9BSC4 688 aaKnown RBP18.69■□□□□ 0.58
TRAPPC12-203ENST00000411973 AATFQ9NY61 560 aaKnown RBP eCLIP18.69■□□□□ 0.58
TRAPPC12-203ENST00000411973 TMEM88BA6NKF7 163 aa18.68■□□□□ 0.58
TRAPPC12-203ENST00000411973 NPM3O75607 178 aaKnown RBP18.68■□□□□ 0.58
TRAPPC12-203ENST00000411973 WDHD1O75717 1129 aaPredicted RBP18.68■□□□□ 0.58
TRAPPC12-203ENST00000411973 CELF2O95319 508 aaKnown RBP18.68■□□□□ 0.58
TRAPPC12-203ENST00000411973 NFIAQ12857 509 aa18.68■□□□□ 0.58
TRAPPC12-203ENST00000411973 FAM151AQ8WW52 585 aa18.68■□□□□ 0.58
TRAPPC12-203ENST00000411973 TEPSINQ96N21 525 aa18.68■□□□□ 0.58
TRAPPC12-203ENST00000411973 PPP4R2Q9NY27 417 aa18.68■□□□□ 0.58
TRAPPC12-203ENST00000411973 FAM198AQ9UFP1 575 aa18.68■□□□□ 0.58
TRAPPC12-203ENST00000411973 CDK5RAP2Q96SN8 1893 aa18.68■□□□□ 0.58
TRAPPC12-203ENST00000411973 ZNF532Q9HCE3 1301 aa18.68■□□□□ 0.58
TRAPPC12-203ENST00000411973 RPAP1Q9BWH6 1393 aaPredicted RBP18.68■□□□□ 0.58
TRAPPC12-203ENST00000411973 FOCADQ5VW36 1801 aa18.67■□□□□ 0.58
TRAPPC12-203ENST00000411973 ENTPD3O75355 529 aa18.67■□□□□ 0.58
TRAPPC12-203ENST00000411973 PRAMEF18Q5VWM3 479 aa18.67■□□□□ 0.58
TRAPPC12-203ENST00000411973 TICAM2Q86XR7 235 aa18.67■□□□□ 0.58
TRAPPC12-203ENST00000411973 EVI5LQ96CN4 794 aa18.67■□□□□ 0.58
TRAPPC12-203ENST00000411973 CREBZFQ9NS37 354 aa18.67■□□□□ 0.58
TRAPPC12-203ENST00000411973 ZFYP08048 801 aaPredicted RBP18.66■□□□□ 0.58
TRAPPC12-203ENST00000411973 LRRFIP1Q32MZ4 808 aaKnown RBP18.66■□□□□ 0.58
TRAPPC12-203ENST00000411973 SUPT20HL1Q3ZLR7 823 aa18.66■□□□□ 0.58
TRAPPC12-203ENST00000411973 MIGA1Q8NAN2 632 aa18.66■□□□□ 0.58
TRAPPC12-203ENST00000411973 SH3RF3Q8TEJ3 882 aaPredicted RBP18.66■□□□□ 0.58
TRAPPC12-203ENST00000411973 RIOK1Q9BRS2 568 aaKnown RBP18.66■□□□□ 0.58
TRAPPC12-203ENST00000411973 TMEM39BQ9GZU3 492 aa18.66■□□□□ 0.58
TRAPPC12-203ENST00000411973 RNF113AO15541 343 aaKnown RBP18.65■□□□□ 0.58
TRAPPC12-203ENST00000411973 NF2P35240 595 aa18.65■□□□□ 0.58
TRAPPC12-203ENST00000411973 RGS3P49796 1198 aa18.65■□□□□ 0.58
TRAPPC12-203ENST00000411973 DYNLL1P63167 89 aaKnown RBP18.65■□□□□ 0.58
TRAPPC12-203ENST00000411973 FKBP1BP68106 108 aa18.65■□□□□ 0.58
TRAPPC12-203ENST00000411973 NBPF12Q5TAG4 269 aaPredicted RBP18.65■□□□□ 0.58
TRAPPC12-203ENST00000411973 TEX11Q8IYF3 940 aa18.65■□□□□ 0.58
TRAPPC12-203ENST00000411973 ZNF408Q9H9D4 720 aa18.65■□□□□ 0.58
TRAPPC12-203ENST00000411973 AK9Q5TCS8 1911 aa18.64■□□□□ 0.58
TRAPPC12-203ENST00000411973 PAPPA2Q9BXP8 1791 aa18.64■□□□□ 0.57
TRAPPC12-203ENST00000411973 MAGEB6P1A0A0J9YX57 407 aa18.64■□□□□ 0.57
TRAPPC12-203ENST00000411973 CHGBP05060 677 aa18.64■□□□□ 0.57
TRAPPC12-203ENST00000411973 FSD1Q9BTV5 496 aa18.64■□□□□ 0.57
TRAPPC12-203ENST00000411973 GBA2Q9HCG7 927 aaPredicted RBP18.64■□□□□ 0.57
TRAPPC12-203ENST00000411973 DDX4Q9NQI0 724 aaKnown RBP18.64■□□□□ 0.57
TRAPPC12-203ENST00000411973 SSC5DA1L4H1 1573 aa18.64■□□□□ 0.57
TRAPPC12-203ENST00000411973 TCP10Q12799 353 aa18.63■□□□□ 0.57
TRAPPC12-203ENST00000411973 SLFNL1Q499Z3 407 aa18.63■□□□□ 0.57
TRAPPC12-203ENST00000411973 CDAN1Q8IWY9 1227 aa18.63■□□□□ 0.57
TRAPPC12-203ENST00000411973 ZFPM1Q8IX07 1006 aa18.63■□□□□ 0.57
TRAPPC12-203ENST00000411973 C2orf69Q8N8R5 385 aa18.63■□□□□ 0.57
TRAPPC12-203ENST00000411973 TLL2Q9Y6L7 1015 aa18.63■□□□□ 0.57
TRAPPC12-203ENST00000411973 COL2A1P02458 1487 aaPredicted RBP18.63■□□□□ 0.57
TRAPPC12-203ENST00000411973 PICALMQ13492 652 aa18.62■□□□□ 0.57
TRAPPC12-203ENST00000411973 SAPCD2Q86UD0 394 aa18.62■□□□□ 0.57
TRAPPC12-203ENST00000411973 APPBP2Q92624 585 aa18.62■□□□□ 0.57
TRAPPC12-203ENST00000411973 HOOK2Q96ED9 719 aa18.62■□□□□ 0.57
TRAPPC12-203ENST00000411973 PUS7LQ9H0K6 701 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms