RNA–Protein interactions for RNA: ENST00000411809.6

CLINT1-201, Transcript of clathrin interactor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLINT1, Length 3,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-201ENST00000411809 CCDC102BQ68D86 513 aa15.14■□□□□ 0.01
CLINT1-201ENST00000411809 CCDC85AQ96PX6 553 aaPredicted RBP15.14■□□□□ 0.01
CLINT1-201ENST00000411809 TACC3Q9Y6A5 838 aa15.14■□□□□ 0.01
CLINT1-201ENST00000411809 SPATA31A5Q5VU36 1347 aa15.14■□□□□ 0.01
CLINT1-201ENST00000411809 SPATA31A7Q8IWB4 1347 aa15.14■□□□□ 0.01
CLINT1-201ENST00000411809 METTL24Q5JXM2 366 aa15.14■□□□□ 0.01
CLINT1-201ENST00000411809 MARCH10Q8NA82 808 aaPredicted RBP15.14■□□□□ 0.01
CLINT1-201ENST00000411809 NTSR2O95665 410 aa15.14■□□□□ 0.01
CLINT1-201ENST00000411809 ITPK1Q13572 414 aa15.14■□□□□ 0.01
CLINT1-201ENST00000411809 FBXO38Q6PIJ6 1188 aa15.14■□□□□ 0.01
CLINT1-201ENST00000411809 AOPEPQ8N6M6 819 aa15.14■□□□□ 0.01
CLINT1-201ENST00000411809 PHKA1P46020 1223 aa15.13■□□□□ 0.01
CLINT1-201ENST00000411809 ME1P48163 572 aa15.13■□□□□ 0.01
CLINT1-201ENST00000411809 MYH13Q9UKX3 1938 aa15.13■□□□□ 0.01
CLINT1-201ENST00000411809 TTF1Q15361 905 aaPredicted RBP15.13■□□□□ 0.01
CLINT1-201ENST00000411809 BARGINQ6ZT62 677 aa15.13■□□□□ 0.01
CLINT1-201ENST00000411809 CHST3Q7LGC8 479 aa15.13■□□□□ 0.01
CLINT1-201ENST00000411809 TBC1D10CQ8IV04 446 aa15.13■□□□□ 0.01
CLINT1-201ENST00000411809 GOLPH3LQ9H4A5 285 aa15.13■□□□□ 0.01
CLINT1-201ENST00000411809 BTAF1O14981 1849 aa15.13■□□□□ 0.01
CLINT1-201ENST00000411809 BIN1O00499 593 aa15.13■□□□□ 0.01
CLINT1-201ENST00000411809 PUM3Q15397 648 aaKnown RBP15.13■□□□□ 0.01
CLINT1-201ENST00000411809 ISM2Q6H9L7 571 aa15.13■□□□□ 0.01
CLINT1-201ENST00000411809 LPIN2Q92539 896 aa15.13■□□□□ 0.01
CLINT1-201ENST00000411809 TRMT112Q9UI30 125 aaKnown RBP15.13■□□□□ 0.01
CLINT1-201ENST00000411809 DENND2AQ9ULE3 1009 aa15.13■□□□□ 0.01
CLINT1-201ENST00000411809 COL1A1P02452 1464 aaPredicted RBP15.12■□□□□ 0.01
CLINT1-201ENST00000411809 SLFN14P0C7P3 912 aa15.12■□□□□ 0.01
CLINT1-201ENST00000411809 IMMTQ16891 758 aaKnown RBP15.12■□□□□ 0.01
CLINT1-201ENST00000411809 BBXQ8WY36 941 aaPredicted RBP15.12■□□□□ 0.01
CLINT1-201ENST00000411809 CRKLP46109 303 aaKnown RBP15.12■□□□□ 0.01
CLINT1-201ENST00000411809 IQCB1Q15051 598 aa15.12■□□□□ 0.01
CLINT1-201ENST00000411809 CCDC73Q6ZRK6 1079 aa15.12■□□□□ 0.01
CLINT1-201ENST00000411809 CCDC87Q9NVE4 849 aa15.12■□□□□ 0.01
CLINT1-201ENST00000411809 KINO60870 393 aaKnown RBP15.11■□□□□ 0.01
CLINT1-201ENST00000411809 SMC2O95347 1197 aa15.11■□□□□ 0.01
CLINT1-201ENST00000411809 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.11■□□□□ 0.01
CLINT1-201ENST00000411809 KRT222Q8N1A0 295 aa15.11■□□□□ 0.01
CLINT1-201ENST00000411809 STRBPQ96SI9 672 aaKnown RBP15.11■□□□□ 0.01
CLINT1-201ENST00000411809 SDF4Q9BRK5 362 aa15.11■□□□□ 0.01
CLINT1-201ENST00000411809 CFAP45Q9UL16 551 aa15.11■□□□□ 0.01
CLINT1-201ENST00000411809 TBC1D2BQ9UPU7 963 aa15.11■□□□□ 0.01
CLINT1-201ENST00000411809 ERCC6LQ2NKX8 1250 aa15.11■□□□□ 0.01
CLINT1-201ENST00000411809 CYB5R4Q7L1T6 521 aa15.11■□□□□ 0.01
CLINT1-201ENST00000411809 LRRN4CLQ8ND94 238 aa15.11■□□□□ 0.01
CLINT1-201ENST00000411809 USP28Q96RU2 1077 aa15.11■□□□□ 0.01
CLINT1-201ENST00000411809 WWC3Q9ULE0 1092 aa15.11■□□□□ 0.01
CLINT1-201ENST00000411809 PRC1O43663 620 aa15.11■□□□□ 0.01
CLINT1-201ENST00000411809 PDE6AP16499 860 aa15.11■□□□□ 0.01
CLINT1-201ENST00000411809 PTPN21Q16825 1174 aa15.11■□□□□ 0.01
CLINT1-201ENST00000411809 EPB41L4AQ9HCS5 686 aaPredicted RBP15.11■□□□□ 0.01
CLINT1-201ENST00000411809 UQCRFS1P1P0C7P4 283 aa15.1■□□□□ 0.01
CLINT1-201ENST00000411809 FSIP1Q8NA03 581 aa15.1■□□□□ 0.01
CLINT1-201ENST00000411809 RTEL1Q9NZ71 1219 aa15.1■□□□□ 0.01
CLINT1-201ENST00000411809 VGLL3A8MV65 326 aa15.1■□□□□ 0.01
CLINT1-201ENST00000411809 STX1AQ16623 288 aa15.1■□□□□ 0.01
CLINT1-201ENST00000411809 OTUD7BQ6GQQ9 843 aa15.1■□□□□ 0.01
CLINT1-201ENST00000411809 STK11IPQ8N1F8 1099 aa15.1■□□□□ 0.01
CLINT1-201ENST00000411809 ZNF397Q8NF99 534 aaPredicted RBP15.1■□□□□ 0.01
CLINT1-201ENST00000411809 NCOA7Q8NI08 942 aa15.1■□□□□ 0.01
CLINT1-201ENST00000411809 ZNF804BA4D1E1 1349 aa15.1■□□□□ 0.01
CLINT1-201ENST00000411809 ZNF532Q9HCE3 1301 aa15.1■□□□□ 0.01
CLINT1-201ENST00000411809 SH2B2O14492 632 aaPredicted RBP15.1■□□□□ 0.01
CLINT1-201ENST00000411809 RGL2O15211 777 aa15.1■□□□□ 0.01
CLINT1-201ENST00000411809 SYT10Q6XYQ8 523 aa15.1■□□□□ 0.01
CLINT1-201ENST00000411809 IGDCC4Q8TDY8 1250 aa15.1■□□□□ 0.01
CLINT1-201ENST00000411809 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.1■□□□□ 0.013e-10■□□□□ 8.6
CLINT1-201ENST00000411809 ZNF330Q9Y3S2 320 aaPredicted RBP15.1■□□□□ 0.01
CLINT1-201ENST00000411809 DUOX1Q9NRD9 1551 aa15.09■□□□□ 0.01
CLINT1-201ENST00000411809 RASGRF1Q13972 1273 aa15.09■□□□□ 0.01
CLINT1-201ENST00000411809 TERF2Q15554 542 aa15.09■□□□□ 0.01
CLINT1-201ENST00000411809 A0A1B0GVL5 298 aa15.09■□□□□ 0.01
CLINT1-201ENST00000411809 HAND2P61296 217 aa15.09■□□□□ 0.01
CLINT1-201ENST00000411809 ZRSR1Q15695 479 aaKnown RBP15.09■□□□□ 0.01
CLINT1-201ENST00000411809 NTRK3Q16288 839 aa15.09■□□□□ 0.01
CLINT1-201ENST00000411809 TAF7LQ5H9L4 462 aa15.09■□□□□ 0.01
CLINT1-201ENST00000411809 SLC9C2Q5TAH2 1124 aa15.09■□□□□ 0.01
CLINT1-201ENST00000411809 RAB11FIP4Q86YS3 637 aa15.09■□□□□ 0.01
CLINT1-201ENST00000411809 FAM217BQ9NTX9 383 aaPredicted RBP15.09■□□□□ 0.01
CLINT1-201ENST00000411809 MORC2Q9Y6X9 1032 aaPredicted RBP15.09■□□□□ 0.01
CLINT1-201ENST00000411809 LOC102724428A0A0B4J2F2 783 aa15.08■□□□□ 0.01
CLINT1-201ENST00000411809 SIK1P57059 783 aa15.08■□□□□ 0.01
CLINT1-201ENST00000411809 SGMS1Q86VZ5 419 aa15.08■□□□□ 0.01
CLINT1-201ENST00000411809 HOMER1Q86YM7 354 aa15.08■□□□□ 0.01
CLINT1-201ENST00000411809 CCAR2Q8N163 923 aaKnown RBP15.08■□□□□ 0.01
CLINT1-201ENST00000411809 CHMP4CQ96CF2 233 aa15.08■□□□□ 0.01
CLINT1-201ENST00000411809 CNNM1Q9NRU3 951 aa15.08■□□□□ 0.01
CLINT1-201ENST00000411809 TNRC6CQ9HCJ0 1690 aaKnown RBP15.08■□□□□ 0.01
CLINT1-201ENST00000411809 PNPLA7Q6ZV29 1317 aa15.08■□□□□ 0
CLINT1-201ENST00000411809 RBM6P78332 1123 aaKnown RBP15.08■□□□□ 0
CLINT1-201ENST00000411809 CCZ1BP86790 482 aa15.08■□□□□ 0
CLINT1-201ENST00000411809 CCZ1P86791 482 aaPredicted RBP15.08■□□□□ 0
CLINT1-201ENST00000411809 WASHC4Q2M389 1173 aa15.08■□□□□ 0
CLINT1-201ENST00000411809 PARP10Q53GL7 1025 aa15.08■□□□□ 0
CLINT1-201ENST00000411809 FAM177A1Q8N128 213 aaPredicted RBP15.08■□□□□ 0
CLINT1-201ENST00000411809 SPATA5Q8NB90 893 aa15.08■□□□□ 0
CLINT1-201ENST00000411809 FBXO18Q8NFZ0 1043 aa15.08■□□□□ 0
CLINT1-201ENST00000411809 ZNF213O14771 459 aa15.08■□□□□ 0
CLINT1-201ENST00000411809 TMC6Q7Z403 805 aa15.08■□□□□ 0
CLINT1-201ENST00000411809 GABPB1Q06547 395 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms