RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 DBF4Q9UBU7 674 aaPredicted RBP3.67□□□□□ -1.82
CUL3-204ENST00000409777 TUBE1Q9UJT0 475 aa3.67□□□□□ -1.82
CUL3-204ENST00000409777 PLCH1Q4KWH8 1693 aa3.67□□□□□ -1.82
CUL3-204ENST00000409777 KDM6AO15550 1401 aaPredicted RBP3.67□□□□□ -1.82
CUL3-204ENST00000409777 VPS37CA5D8V6 355 aaPredicted RBP3.66□□□□□ -1.82
CUL3-204ENST00000409777 TADA3O75528 432 aa3.66□□□□□ -1.82
CUL3-204ENST00000409777 SKILP12757 684 aa3.66□□□□□ -1.82
CUL3-204ENST00000409777 SSTR3P32745 418 aaPredicted RBP3.66□□□□□ -1.82
CUL3-204ENST00000409777 SCRN1Q12765 414 aa3.66□□□□□ -1.82
CUL3-204ENST00000409777 PTPN14Q15678 1187 aa3.66□□□□□ -1.82
CUL3-204ENST00000409777 CAMK4Q16566 473 aa3.66□□□□□ -1.82
CUL3-204ENST00000409777 FAM173BQ6P4H8 233 aa3.66□□□□□ -1.82
CUL3-204ENST00000409777 RSRC2Q7L4I2 434 aaKnown RBP3.66□□□□□ -1.82
CUL3-204ENST00000409777 CKAP2LQ8IYA6 745 aa3.66□□□□□ -1.82
CUL3-204ENST00000409777 NFATC2IPQ8NCF5 419 aa3.66□□□□□ -1.82
CUL3-204ENST00000409777 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.66□□□□□ -1.82
CUL3-204ENST00000409777 BRF1Q92994 677 aa3.66□□□□□ -1.82
CUL3-204ENST00000409777 ZNF274Q96GC6 653 aaPredicted RBP3.66□□□□□ -1.82
CUL3-204ENST00000409777 SUCLG2Q96I99 432 aa3.66□□□□□ -1.82
CUL3-204ENST00000409777 HAUS7Q99871 368 aa3.66□□□□□ -1.82
CUL3-204ENST00000409777 DSCC1Q9BVC3 393 aa3.66□□□□□ -1.82
CUL3-204ENST00000409777 SRRTQ9BXP5 876 aaKnown RBP3.66□□□□□ -1.82
CUL3-204ENST00000409777 GPR108Q9NPR9 543 aa3.66□□□□□ -1.82
CUL3-204ENST00000409777 ORC3Q9UBD5 711 aaPredicted RBP3.66□□□□□ -1.82
CUL3-204ENST00000409777 HPSEQ9Y251 543 aa3.66□□□□□ -1.82
CUL3-204ENST00000409777 ABCC12Q96J65 1359 aa3.66□□□□□ -1.82
CUL3-204ENST00000409777 CCDC66A2RUB6 948 aa3.66□□□□□ -1.82
CUL3-204ENST00000409777 GRM8O00222 908 aa3.66□□□□□ -1.82
CUL3-204ENST00000409777 JAK2O60674 1132 aa3.66□□□□□ -1.82
CUL3-204ENST00000409777 RPS6KA5O75582 802 aa3.66□□□□□ -1.82
CUL3-204ENST00000409777 YEATS4O95619 227 aa3.66□□□□□ -1.82
CUL3-204ENST00000409777 IGKV5-2P06315 115 aa3.66□□□□□ -1.82
CUL3-204ENST00000409777 PNMA6AP0CW24 399 aaPredicted RBP3.66□□□□□ -1.82
CUL3-204ENST00000409777 FDPSP14324 419 aaKnown RBP3.66□□□□□ -1.82
CUL3-204ENST00000409777 CAPN2P17655 700 aa3.66□□□□□ -1.82
CUL3-204ENST00000409777 BMS1Q14692 1282 aaKnown RBP3.66□□□□□ -1.82
CUL3-204ENST00000409777 TPD52L1Q16890 204 aaPredicted RBP3.66□□□□□ -1.82
CUL3-204ENST00000409777 FOXD4L6Q3SYB3 417 aaPredicted RBP3.66□□□□□ -1.82
CUL3-204ENST00000409777 NOM1Q5C9Z4 860 aaKnown RBP3.66□□□□□ -1.82
CUL3-204ENST00000409777 ADALQ6DHV7 355 aa3.66□□□□□ -1.82
CUL3-204ENST00000409777 FOXD4L3Q6VB84 417 aaPredicted RBP3.66□□□□□ -1.82
CUL3-204ENST00000409777 METTL3Q86U44 580 aaKnown RBP3.66□□□□□ -1.82
CUL3-204ENST00000409777 REXO1L1PQ8IX06 675 aa3.66□□□□□ -1.82
CUL3-204ENST00000409777 ATG3Q9NT62 314 aa3.66□□□□□ -1.82
CUL3-204ENST00000409777 TLR7Q9NYK1 1049 aaKnown RBP3.66□□□□□ -1.82
CUL3-204ENST00000409777 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.66□□□□□ -1.82
CUL3-204ENST00000409777 A0A1B0GUL6 1792 aa3.66□□□□□ -1.82
CUL3-204ENST00000409777 KCPQ6ZWJ8 1503 aa3.66□□□□□ -1.82
CUL3-204ENST00000409777 CICQ96RK0 1608 aaPredicted RBP3.66□□□□□ -1.82
CUL3-204ENST00000409777 MAP3K7O43318 606 aa3.66□□□□□ -1.82
CUL3-204ENST00000409777 CYP21A2P08686 494 aa3.66□□□□□ -1.82
CUL3-204ENST00000409777 NLRP12P59046 1061 aa3.66□□□□□ -1.82
CUL3-204ENST00000409777 ELF2Q15723 593 aa3.66□□□□□ -1.82
CUL3-204ENST00000409777 TSR1Q2NL82 804 aaKnown RBP3.66□□□□□ -1.82
CUL3-204ENST00000409777 CCDC158Q5M9N0 1113 aa3.66□□□□□ -1.82
CUL3-204ENST00000409777 C6orf132Q5T0Z8 1188 aa3.66□□□□□ -1.82
CUL3-204ENST00000409777 AXDND1Q5T1B0 1012 aaPredicted RBP3.66□□□□□ -1.82
CUL3-204ENST00000409777 AACSQ86V21 672 aa3.66□□□□□ -1.82
CUL3-204ENST00000409777 CCAR1Q8IX12 1150 aaKnown RBP3.66□□□□□ -1.82
CUL3-204ENST00000409777 LRRN4CLQ8ND94 238 aa3.66□□□□□ -1.82
CUL3-204ENST00000409777 MRRFQ96E11 262 aaKnown RBP3.66□□□□□ -1.82
CUL3-204ENST00000409777 NEK1Q96PY6 1258 aa3.66□□□□□ -1.82
CUL3-204ENST00000409777 TSPYL1Q9H0U9 437 aa3.66□□□□□ -1.82
CUL3-204ENST00000409777 DDX21Q9NR30 783 aaKnown RBP eCLIP3.66□□□□□ -1.82
CUL3-204ENST00000409777 HELLSQ9NRZ9 838 aa3.66□□□□□ -1.82
CUL3-204ENST00000409777 LIMD1Q9UGP4 676 aa3.66□□□□□ -1.82
CUL3-204ENST00000409777 DNAI1Q9UI46 699 aa3.66□□□□□ -1.82
CUL3-204ENST00000409777 PARP3Q9Y6F1 533 aa3.66□□□□□ -1.82
CUL3-204ENST00000409777 LAMB2P55268 1798 aa3.65□□□□□ -1.82
CUL3-204ENST00000409777 EFCAB8A8MWE9 144 aa3.65□□□□□ -1.82
CUL3-204ENST00000409777 MAP2K7O14733 419 aa3.65□□□□□ -1.82
CUL3-204ENST00000409777 FOXP2O15409 715 aa3.65□□□□□ -1.82
CUL3-204ENST00000409777 RNMTO43148 476 aaKnown RBP3.65□□□□□ -1.82
CUL3-204ENST00000409777 CCP110O43303 1012 aa3.65□□□□□ -1.82
CUL3-204ENST00000409777 KCNQ3O43525 872 aa3.65□□□□□ -1.82
CUL3-204ENST00000409777 IFIT2P09913 472 aaKnown RBP3.65□□□□□ -1.82
CUL3-204ENST00000409777 USP5P45974 858 aa3.65□□□□□ -1.82
CUL3-204ENST00000409777 ETF1P62495 437 aaKnown RBP3.65□□□□□ -1.82
CUL3-204ENST00000409777 PROSER3Q2NL68 480 aa3.65□□□□□ -1.82
CUL3-204ENST00000409777 AMOTQ4VCS5 1084 aa3.65□□□□□ -1.82
CUL3-204ENST00000409777 CCDC125Q86Z20 511 aa3.65□□□□□ -1.82
CUL3-204ENST00000409777 CEP57L1Q8IYX8 460 aa3.65□□□□□ -1.82
CUL3-204ENST00000409777 LINC00301Q8NCQ3 95 aa3.65□□□□□ -1.82
CUL3-204ENST00000409777 BANK1Q8NDB2 785 aa3.65□□□□□ -1.82
CUL3-204ENST00000409777 ZDHHC16Q969W1 377 aa3.65□□□□□ -1.82
CUL3-204ENST00000409777 KIFC2Q96AC6 838 aa3.65□□□□□ -1.82
CUL3-204ENST00000409777 CHMP4CQ96CF2 233 aa3.65□□□□□ -1.82
CUL3-204ENST00000409777 USP28Q96RU2 1077 aa3.65□□□□□ -1.82
CUL3-204ENST00000409777 BICC1Q9H694 974 aaKnown RBP3.65□□□□□ -1.82
CUL3-204ENST00000409777 LGR6Q9HBX8 967 aa3.65□□□□□ -1.82
CUL3-204ENST00000409777 CALCOCO1Q9P1Z2 691 aa3.65□□□□□ -1.82
CUL3-204ENST00000409777 KIAA1468Q9P260 1216 aa3.65□□□□□ -1.82
CUL3-204ENST00000409777 DBNLQ9UJU6 430 aaKnown RBP3.65□□□□□ -1.82
CUL3-204ENST00000409777 MAP3K2Q9Y2U5 619 aa3.65□□□□□ -1.82
CUL3-204ENST00000409777 MYH13Q9UKX3 1938 aa3.65□□□□□ -1.83
CUL3-204ENST00000409777 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.65□□□□□ -1.83
CUL3-204ENST00000409777 TMEM88BA6NKF7 163 aa3.65□□□□□ -1.83
CUL3-204ENST00000409777 NEURL1BA8MQ27 555 aa3.65□□□□□ -1.83
CUL3-204ENST00000409777 TBC1D8O95759 1140 aa3.65□□□□□ -1.83
CUL3-204ENST00000409777 TPM1P09493 284 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms