RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 CDPF1Q6NVV7 123 aa8.09□□□□□ -1.11
HMGB1P13-201ENST00000406019 SULF2Q8IWU5 870 aa8.09□□□□□ -1.11
HMGB1P13-201ENST00000406019 FAM83CQ9BQN1 747 aa8.09□□□□□ -1.11
HMGB1P13-201ENST00000406019 IGSF5Q9NSI5 407 aa8.09□□□□□ -1.11
HMGB1P13-201ENST00000406019 PARP2Q9UGN5 583 aa8.09□□□□□ -1.11
HMGB1P13-201ENST00000406019 ACTL7BQ9Y614 415 aa8.09□□□□□ -1.11
HMGB1P13-201ENST00000406019 FBXO24O75426 580 aa8.08□□□□□ -1.12
HMGB1P13-201ENST00000406019 CELA3AP09093 270 aa8.08□□□□□ -1.12
HMGB1P13-201ENST00000406019 NME2P22392 152 aa8.08□□□□□ -1.12
HMGB1P13-201ENST00000406019 ARNTP27540 789 aa8.08□□□□□ -1.12
HMGB1P13-201ENST00000406019 PPP2R3AQ06190 1150 aa8.08□□□□□ -1.12
HMGB1P13-201ENST00000406019 KIF4BQ2VIQ3 1234 aa8.08□□□□□ -1.12
HMGB1P13-201ENST00000406019 TPTE2Q6XPS3 522 aa8.08□□□□□ -1.12
HMGB1P13-201ENST00000406019 CLEC10AQ8IUN9 316 aa8.08□□□□□ -1.12
HMGB1P13-201ENST00000406019 TRIM42Q8IWZ5 723 aa8.08□□□□□ -1.12
HMGB1P13-201ENST00000406019 C12orf50Q8NA57 414 aaPredicted RBP8.08□□□□□ -1.12
HMGB1P13-201ENST00000406019 EZH1Q92800 747 aaPredicted RBP8.08□□□□□ -1.12
HMGB1P13-201ENST00000406019 PPP1R9AQ9ULJ8 1098 aa8.08□□□□□ -1.12
HMGB1P13-201ENST00000406019 HMX2A2RU54 273 aa8.07□□□□□ -1.12
HMGB1P13-201ENST00000406019 TMPRSS2O15393 492 aa8.07□□□□□ -1.12
HMGB1P13-201ENST00000406019 CTSHP09668 335 aa8.07□□□□□ -1.12
HMGB1P13-201ENST00000406019 HP1BP3Q5SSJ5 553 aaPredicted RBP8.07□□□□□ -1.12
HMGB1P13-201ENST00000406019 BEND4Q6ZU67 534 aa8.07□□□□□ -1.12
HMGB1P13-201ENST00000406019 STOML1Q9UBI4 398 aa8.07□□□□□ -1.12
HMGB1P13-201ENST00000406019 SART1O43290 800 aaKnown RBP8.06□□□□□ -1.12
HMGB1P13-201ENST00000406019 LIG1P18858 919 aa8.06□□□□□ -1.12
HMGB1P13-201ENST00000406019 EIF4BP23588 611 aaKnown RBP8.06□□□□□ -1.12
HMGB1P13-201ENST00000406019 MAP4P27816 1152 aaKnown RBP8.06□□□□□ -1.12
HMGB1P13-201ENST00000406019 RNF43Q68DV7 783 aa8.06□□□□□ -1.12
HMGB1P13-201ENST00000406019 MPRIPQ6WCQ1 1025 aa8.06□□□□□ -1.12
HMGB1P13-201ENST00000406019 TMC4Q7Z404 712 aa8.06□□□□□ -1.12
HMGB1P13-201ENST00000406019 SLC51AQ86UW1 340 aa8.06□□□□□ -1.12
HMGB1P13-201ENST00000406019 CEP44Q9C0F1 390 aa8.06□□□□□ -1.12
HMGB1P13-201ENST00000406019 ACSS3Q9H6R3 686 aa8.06□□□□□ -1.12
HMGB1P13-201ENST00000406019 FAM105AQ9NUU6 356 aa8.06□□□□□ -1.12
HMGB1P13-201ENST00000406019 CRIM1Q9NZV1 1036 aa8.06□□□□□ -1.12
HMGB1P13-201ENST00000406019 IGLV1-40P01703 118 aa8.05□□□□□ -1.12
HMGB1P13-201ENST00000406019 FGD1P98174 961 aa8.05□□□□□ -1.12
HMGB1P13-201ENST00000406019 SEZ6L2Q6UXD5 910 aa8.05□□□□□ -1.12
HMGB1P13-201ENST00000406019 ZDHHC13Q8IUH4 622 aa8.05□□□□□ -1.12
HMGB1P13-201ENST00000406019 GRIN3AQ8TCU5 1115 aa8.05□□□□□ -1.12
HMGB1P13-201ENST00000406019 GATA6Q92908 595 aa8.05□□□□□ -1.12
HMGB1P13-201ENST00000406019 ZC3H12CQ9C0D7 883 aaKnown RBP8.05□□□□□ -1.12
HMGB1P13-201ENST00000406019 KIAA1522Q9P206 1035 aaPredicted RBP8.05□□□□□ -1.12
HMGB1P13-201ENST00000406019 GAS2O43903 313 aaKnown RBP8.04□□□□□ -1.12
HMGB1P13-201ENST00000406019 IGSF3O75054 1194 aa8.04□□□□□ -1.12
HMGB1P13-201ENST00000406019 ZNF16P17020 682 aaPredicted RBP8.04□□□□□ -1.12
HMGB1P13-201ENST00000406019 NFIAQ12857 509 aa8.04□□□□□ -1.12
HMGB1P13-201ENST00000406019 PDE3AQ14432 1141 aa8.04□□□□□ -1.12
HMGB1P13-201ENST00000406019 AKAP4Q5JQC9 854 aa8.04□□□□□ -1.12
HMGB1P13-201ENST00000406019 ZMYM1Q5SVZ6 1142 aa8.04□□□□□ -1.12
HMGB1P13-201ENST00000406019 FBLIM1Q8WUP2 373 aa8.04□□□□□ -1.12
HMGB1P13-201ENST00000406019 FAM161BQ96MY7 647 aa8.04□□□□□ -1.12
HMGB1P13-201ENST00000406019 SV2BQ7L1I2 683 aa8.03□□□□□ -1.12
HMGB1P13-201ENST00000406019 SHISA5Q8N114 240 aa8.03□□□□□ -1.12
HMGB1P13-201ENST00000406019 GPBAR1Q8TDU6 330 aa8.03□□□□□ -1.12
HMGB1P13-201ENST00000406019 DBNDD2Q9BQY9 259 aa8.03□□□□□ -1.12
HMGB1P13-201ENST00000406019 DISC1Q9NRI5 854 aa8.03□□□□□ -1.12
HMGB1P13-201ENST00000406019 RNF112Q9ULX5 631 aa8.03□□□□□ -1.12
HMGB1P13-201ENST00000406019 PRR19A6NJB7 356 aa8.02□□□□□ -1.13
HMGB1P13-201ENST00000406019 GSC2O15499 205 aa8.02□□□□□ -1.13
HMGB1P13-201ENST00000406019 ZC3H12AQ5D1E8 599 aaKnown RBP8.02□□□□□ -1.13
HMGB1P13-201ENST00000406019 MEI1Q5TIA1 1274 aa8.02□□□□□ -1.13
HMGB1P13-201ENST00000406019 GAL3ST3Q96A11 431 aa8.02□□□□□ -1.13
HMGB1P13-201ENST00000406019 EMILIN2Q9BXX0 1053 aa8.02□□□□□ -1.13
HMGB1P13-201ENST00000406019 SEMA6CQ9H3T2 930 aa8.02□□□□□ -1.13
HMGB1P13-201ENST00000406019 AP4E1Q9UPM8 1137 aa8.02□□□□□ -1.13
HMGB1P13-201ENST00000406019 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.01□□□□□ -1.13
HMGB1P13-201ENST00000406019 TRIM37O94972 964 aa8.01□□□□□ -1.13
HMGB1P13-201ENST00000406019 NTF4P34130 210 aa8.01□□□□□ -1.13
HMGB1P13-201ENST00000406019 ID3Q02535 119 aa8.01□□□□□ -1.13
HMGB1P13-201ENST00000406019 PCNX4Q63HM2 1172 aa8.01□□□□□ -1.13
HMGB1P13-201ENST00000406019 MAP1SQ66K74 1059 aaPredicted RBP8.01□□□□□ -1.13
HMGB1P13-201ENST00000406019 SCARA3Q6AZY7 606 aa8.01□□□□□ -1.13
HMGB1P13-201ENST00000406019 KCNB2Q92953 911 aa8.01□□□□□ -1.13
HMGB1P13-201ENST00000406019 MRRFQ96E11 262 aaKnown RBP8.01□□□□□ -1.13
HMGB1P13-201ENST00000406019 FANCD2OSQ96PS1 177 aa8.01□□□□□ -1.13
HMGB1P13-201ENST00000406019 BCL2L13Q9BXK5 485 aa8.01□□□□□ -1.13
HMGB1P13-201ENST00000406019 KCNF1Q9H3M0 494 aa8.01□□□□□ -1.13
HMGB1P13-201ENST00000406019 PRKAG2Q9UGJ0 569 aa8.01□□□□□ -1.13
HMGB1P13-201ENST00000406019 DYNC1LI2O43237 492 aaPredicted RBP8□□□□□ -1.13
HMGB1P13-201ENST00000406019 NEFMP07197 916 aa8□□□□□ -1.13
HMGB1P13-201ENST00000406019 ADMP35318 185 aa8□□□□□ -1.13
HMGB1P13-201ENST00000406019 PTPN11Q06124 597 aaPredicted RBP8□□□□□ -1.13
HMGB1P13-201ENST00000406019 RING1Q06587 406 aa8□□□□□ -1.13
HMGB1P13-201ENST00000406019 PSMD2Q13200 908 aa8□□□□□ -1.13
HMGB1P13-201ENST00000406019 DYMQ7RTS9 669 aa8□□□□□ -1.13
HMGB1P13-201ENST00000406019 Q8N3U1 123 aa8□□□□□ -1.13
HMGB1P13-201ENST00000406019 RAD18Q9NS91 495 aa8□□□□□ -1.13
HMGB1P13-201ENST00000406019 TTF2Q9UNY4 1162 aaKnown RBP8□□□□□ -1.13
HMGB1P13-201ENST00000406019 USP31Q70CQ4 1352 aa7.99□□□□□ -1.13
HMGB1P13-201ENST00000406019 FAM95CA0A1B0GW59 222 aa7.99□□□□□ -1.13
HMGB1P13-201ENST00000406019 NFICP08651 508 aa7.99□□□□□ -1.13
HMGB1P13-201ENST00000406019 ST13P50502 369 aaKnown RBP7.99□□□□□ -1.13
HMGB1P13-201ENST00000406019 USP11P51784 963 aa7.99□□□□□ -1.13
HMGB1P13-201ENST00000406019 LLGL2Q6P1M3 1020 aa7.99□□□□□ -1.13
HMGB1P13-201ENST00000406019 C1GALT1Q9NS00 363 aa7.99□□□□□ -1.13
HMGB1P13-201ENST00000406019 MED26O95402 600 aa7.98□□□□□ -1.13
HMGB1P13-201ENST00000406019 TGFB1P01137 390 aa7.98□□□□□ -1.13
HMGB1P13-201ENST00000406019 F13BP05160 661 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms