RNA–Protein interactions for RNA: ENST00000400907.6

RERE-203, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 5 BASIC

Gene RERE, Length 2,973 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-203ENST00000400907 UTRNP46939 3433 aa9.27□□□□□ -0.92
RERE-203ENST00000400907 IGHMBP2P38935 993 aaKnown RBP9.27□□□□□ -0.93
RERE-203ENST00000400907 ZNF165P49910 485 aa9.27□□□□□ -0.93
RERE-203ENST00000400907 NUBP1P53384 320 aa9.27□□□□□ -0.93
RERE-203ENST00000400907 ME3Q16798 604 aa9.27□□□□□ -0.93
RERE-203ENST00000400907 LRRC8AQ8IWT6 810 aa9.27□□□□□ -0.93
RERE-203ENST00000400907 FLAD1Q8NFF5 587 aa9.27□□□□□ -0.93
RERE-203ENST00000400907 WTIPA6NIX2 430 aaPredicted RBP9.27□□□□□ -0.93
RERE-203ENST00000400907 TULP2O00295 520 aa9.27□□□□□ -0.93
RERE-203ENST00000400907 TM4SF1P30408 202 aa9.27□□□□□ -0.93
RERE-203ENST00000400907 ST5P78524 1137 aa9.27□□□□□ -0.93
RERE-203ENST00000400907 GORABQ5T7V8 394 aa9.27□□□□□ -0.93
RERE-203ENST00000400907 NYAP1Q6ZVC0 841 aa9.27□□□□□ -0.93
RERE-203ENST00000400907 ILDR2Q71H61 639 aa9.27□□□□□ -0.93
RERE-203ENST00000400907 ATG9AQ7Z3C6 839 aa9.27□□□□□ -0.93
RERE-203ENST00000400907 DDX11Q96FC9 970 aa9.27□□□□□ -0.93
RERE-203ENST00000400907 FSD1Q9BTV5 496 aa9.27□□□□□ -0.93
RERE-203ENST00000400907 PLA2G12BQ9BX93 195 aa9.27□□□□□ -0.93
RERE-203ENST00000400907 CARMIL3Q8ND23 1372 aa9.26□□□□□ -0.93
RERE-203ENST00000400907 TTC41PQ6P2S7 1318 aa9.26□□□□□ -0.93
RERE-203ENST00000400907 POLRMTO00411 1230 aaKnown RBP9.26□□□□□ -0.93
RERE-203ENST00000400907 NR1I2O75469 434 aa9.26□□□□□ -0.93
RERE-203ENST00000400907 HMGB2P26583 209 aaKnown RBP9.26□□□□□ -0.93
RERE-203ENST00000400907 PTPN14Q15678 1187 aa9.26□□□□□ -0.93
RERE-203ENST00000400907 KRI1Q8N9T8 703 aaKnown RBP9.26□□□□□ -0.93
RERE-203ENST00000400907 LRRN4CLQ8ND94 238 aa9.26□□□□□ -0.93
RERE-203ENST00000400907 TDRD7Q8NHU6 1098 aaKnown RBP9.26□□□□□ -0.93
RERE-203ENST00000400907 GTF3C6Q969F1 213 aa9.26□□□□□ -0.93
RERE-203ENST00000400907 NUP188Q5SRE5 1749 aa9.26□□□□□ -0.93
RERE-203ENST00000400907 IL15P40933 162 aaPredicted RBP9.26□□□□□ -0.93
RERE-203ENST00000400907 KRT85P78386 507 aa9.26□□□□□ -0.93
RERE-203ENST00000400907 CCDC129Q6ZRS4 1044 aa9.26□□□□□ -0.93
RERE-203ENST00000400907 DDX46Q7L014 1031 aaKnown RBP9.26□□□□□ -0.93
RERE-203ENST00000400907 ANKRD18AQ8IVF6 992 aa9.26□□□□□ -0.93
RERE-203ENST00000400907 DBNDD2Q9BQY9 259 aa9.26□□□□□ -0.93
RERE-203ENST00000400907 PDRG1Q9NUG6 133 aa9.26□□□□□ -0.93
RERE-203ENST00000400907 NUP98P52948 1817 aa9.25□□□□□ -0.93
RERE-203ENST00000400907 A0A087WWV3 80 aa9.25□□□□□ -0.93
RERE-203ENST00000400907 HNRNPH2P55795 449 aaKnown RBP9.25□□□□□ -0.93
RERE-203ENST00000400907 LARP1BQ659C4 914 aaKnown RBP9.25□□□□□ -0.93
RERE-203ENST00000400907 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.25□□□□□ -0.93
RERE-203ENST00000400907 RPGRQ92834 1020 aaKnown RBP9.25□□□□□ -0.93
RERE-203ENST00000400907 LY75O60449 1722 aa9.25□□□□□ -0.93
RERE-203ENST00000400907 SKILP12757 684 aa9.25□□□□□ -0.93
RERE-203ENST00000400907 TNNI3KQ59H18 835 aa9.25□□□□□ -0.93
RERE-203ENST00000400907 ZNF622Q969S3 477 aaKnown RBP eCLIP9.25□□□□□ -0.937e-7■■□□□ 13.4
RERE-203ENST00000400907 CDC5LQ99459 802 aaKnown RBP9.25□□□□□ -0.93
RERE-203ENST00000400907 CALCOCO1Q9P1Z2 691 aa9.25□□□□□ -0.93
RERE-203ENST00000400907 FPGT-TNNI3KV9GXZ4 949 aa9.25□□□□□ -0.93
RERE-203ENST00000400907 COL5A3P25940 1745 aaPredicted RBP9.25□□□□□ -0.93
RERE-203ENST00000400907 A0A1B0GUL7 405 aa9.24□□□□□ -0.93
RERE-203ENST00000400907 PYGBP11216 843 aa9.24□□□□□ -0.93
RERE-203ENST00000400907 RPS8P62241 208 aaKnown RBP9.24□□□□□ -0.93
RERE-203ENST00000400907 NMIQ13287 307 aaPredicted RBP9.24□□□□□ -0.93
RERE-203ENST00000400907 E2F4Q16254 413 aa9.24□□□□□ -0.93
RERE-203ENST00000400907 ERCC6LQ2NKX8 1250 aa9.24□□□□□ -0.93
RERE-203ENST00000400907 FILIP1Q7Z7B0 1213 aa9.24□□□□□ -0.93
RERE-203ENST00000400907 CCDC125Q86Z20 511 aa9.24□□□□□ -0.93
RERE-203ENST00000400907 ERO1AQ96HE7 468 aa9.24□□□□□ -0.93
RERE-203ENST00000400907 TRIM34Q9BYJ4 488 aa9.24□□□□□ -0.93
RERE-203ENST00000400907 ADORA1P30542 326 aa9.24□□□□□ -0.93
RERE-203ENST00000400907 CYP2C19P33261 490 aa9.24□□□□□ -0.93
RERE-203ENST00000400907 RAB11FIP4Q86YS3 637 aa9.24□□□□□ -0.93
RERE-203ENST00000400907 GPATCH3Q96I76 525 aa9.24□□□□□ -0.93
RERE-203ENST00000400907 SEC62Q99442 399 aaKnown RBP9.24□□□□□ -0.93
RERE-203ENST00000400907 NOL10Q9BSC4 688 aaKnown RBP9.24□□□□□ -0.93
RERE-203ENST00000400907 SNRKQ9NRH2 765 aa9.24□□□□□ -0.93
RERE-203ENST00000400907 ECHDC1Q9NTX5 307 aa9.24□□□□□ -0.93
RERE-203ENST00000400907 DBNLQ9UJU6 430 aaKnown RBP9.24□□□□□ -0.93
RERE-203ENST00000400907 TPCN1Q9ULQ1 816 aa9.24□□□□□ -0.93
RERE-203ENST00000400907 IQSEC3Q9UPP2 1182 aaPredicted RBP9.24□□□□□ -0.93
RERE-203ENST00000400907 RIPOR2Q9Y4F9 1068 aa9.24□□□□□ -0.93
RERE-203ENST00000400907 CICQ96RK0 1608 aaPredicted RBP9.24□□□□□ -0.93
RERE-203ENST00000400907 GOLGA6L4A6NEF3 574 aa9.24□□□□□ -0.93
RERE-203ENST00000400907 SLC10A5Q5PT55 438 aa9.24□□□□□ -0.93
RERE-203ENST00000400907 RBM43Q6ZSC3 357 aaKnown RBP9.24□□□□□ -0.93
RERE-203ENST00000400907 C11orf57Q6ZUT1 292 aaPredicted RBP9.24□□□□□ -0.93
RERE-203ENST00000400907 CHST3Q7LGC8 479 aa9.24□□□□□ -0.93
RERE-203ENST00000400907 PGBD1Q96JS3 809 aa9.24□□□□□ -0.93
RERE-203ENST00000400907 CLSTN2Q9H4D0 955 aa9.24□□□□□ -0.93
RERE-203ENST00000400907 RBM8AQ9Y5S9 174 aaKnown RBP9.24□□□□□ -0.93
RERE-203ENST00000400907 CCDC171Q6TFL3 1326 aa9.23□□□□□ -0.93
RERE-203ENST00000400907 CCZ1BP86790 482 aa9.23□□□□□ -0.93
RERE-203ENST00000400907 CCZ1P86791 482 aaPredicted RBP9.23□□□□□ -0.93
RERE-203ENST00000400907 CHRNDQ07001 517 aa9.23□□□□□ -0.93
RERE-203ENST00000400907 SLC20A2Q08357 652 aa9.23□□□□□ -0.93
RERE-203ENST00000400907 SF3B3Q15393 1217 aaKnown RBP9.23□□□□□ -0.93
RERE-203ENST00000400907 SPATA32Q96LK8 384 aa9.23□□□□□ -0.93
RERE-203ENST00000400907 FHOD1Q9Y613 1164 aa9.23□□□□□ -0.93
RERE-203ENST00000400907 ELP1O95163 1332 aa9.23□□□□□ -0.93
RERE-203ENST00000400907 TAF1LQ8IZX4 1826 aa9.23□□□□□ -0.93
RERE-203ENST00000400907 A0A0D9SFI3 127 aa9.23□□□□□ -0.93
RERE-203ENST00000400907 CCDC69A6NI79 296 aa9.23□□□□□ -0.93
RERE-203ENST00000400907 GLRX3O76003 335 aaKnown RBP9.23□□□□□ -0.93
RERE-203ENST00000400907 SLU7O95391 586 aaKnown RBP9.23□□□□□ -0.93
RERE-203ENST00000400907 HMGB1P09429 215 aaKnown RBP9.23□□□□□ -0.93
RERE-203ENST00000400907 CHRNA5P30532 468 aa9.23□□□□□ -0.93
RERE-203ENST00000400907 GUCY1B3Q02153 619 aa9.23□□□□□ -0.93
RERE-203ENST00000400907 IQCB1Q15051 598 aa9.23□□□□□ -0.93
RERE-203ENST00000400907 VPS53Q5VIR6 699 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms