RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 LEO1Q8WVC0 666 aaPredicted RBP16.17■□□□□ 0.18
SCAF4-202ENST00000399804 CCDC43Q96MW1 224 aaKnown RBP16.17■□□□□ 0.18
SCAF4-202ENST00000399804 IPO7O95373 1038 aaKnown RBP16.17■□□□□ 0.18
SCAF4-202ENST00000399804 STX1AQ16623 288 aa16.17■□□□□ 0.18
SCAF4-202ENST00000399804 ANO6Q4KMQ2 910 aa16.17■□□□□ 0.18
SCAF4-202ENST00000399804 PDIA3P30101 505 aaKnown RBP16.17■□□□□ 0.18
SCAF4-202ENST00000399804 GNAQP50148 359 aa16.17■□□□□ 0.18
SCAF4-202ENST00000399804 PPARAQ07869 468 aa16.17■□□□□ 0.18
SCAF4-202ENST00000399804 SCRN1Q12765 414 aa16.17■□□□□ 0.18
SCAF4-202ENST00000399804 MSL1Q68DK7 614 aa16.17■□□□□ 0.18
SCAF4-202ENST00000399804 COL15A1P39059 1388 aa16.16■□□□□ 0.18
SCAF4-202ENST00000399804 SCARF1Q14162 830 aa16.16■□□□□ 0.18
SCAF4-202ENST00000399804 CFAP100Q494V2 611 aa16.16■□□□□ 0.18
SCAF4-202ENST00000399804 EYA3Q99504 573 aa16.16■□□□□ 0.18
SCAF4-202ENST00000399804 USP42Q9H9J4 1324 aaKnown RBP16.16■□□□□ 0.18
SCAF4-202ENST00000399804 KRT18P05783 430 aaKnown RBP16.16■□□□□ 0.18
SCAF4-202ENST00000399804 CCDC178Q5BJE1 867 aa16.16■□□□□ 0.18
SCAF4-202ENST00000399804 CCAR2Q8N163 923 aaKnown RBP16.16■□□□□ 0.18
SCAF4-202ENST00000399804 RBSNQ9H1K0 784 aa16.16■□□□□ 0.18
SCAF4-202ENST00000399804 NARFQ9UHQ1 456 aa16.16■□□□□ 0.18
SCAF4-202ENST00000399804 DPP8Q6V1X1 898 aaPredicted RBP16.16■□□□□ 0.18
SCAF4-202ENST00000399804 HEATR3Q7Z4Q2 680 aa16.16■□□□□ 0.18
SCAF4-202ENST00000399804 DNAJC25Q9H1X3 360 aa16.16■□□□□ 0.18
SCAF4-202ENST00000399804 ZHX3Q9H4I2 956 aa16.16■□□□□ 0.18
SCAF4-202ENST00000399804 RIPOR2Q9Y4F9 1068 aa16.16■□□□□ 0.18
SCAF4-202ENST00000399804 V9GY48 417 aaPredicted RBP16.16■□□□□ 0.18
SCAF4-202ENST00000399804 PRKAB2O43741 272 aa16.15■□□□□ 0.18
SCAF4-202ENST00000399804 SERPINB2P05120 415 aa16.15■□□□□ 0.18
SCAF4-202ENST00000399804 CYP2E1P05181 493 aaPredicted RBP16.15■□□□□ 0.18
SCAF4-202ENST00000399804 TYRO3Q06418 890 aa16.15■□□□□ 0.18
SCAF4-202ENST00000399804 UVSSAQ2YD98 709 aa16.15■□□□□ 0.18
SCAF4-202ENST00000399804 FAM200AQ8TCP9 573 aa16.15■□□□□ 0.18
SCAF4-202ENST00000399804 A0A1B0GVL5 298 aa16.15■□□□□ 0.18
SCAF4-202ENST00000399804 MAPKAPK5Q8IW41 473 aa16.15■□□□□ 0.18
SCAF4-202ENST00000399804 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.15■□□□□ 0.18
SCAF4-202ENST00000399804 JCADQ9P266 1359 aa16.15■□□□□ 0.18
SCAF4-202ENST00000399804 ANKRD26Q9UPS8 1709 aa16.15■□□□□ 0.18
SCAF4-202ENST00000399804 TRIM75PA6NK02 468 aa16.15■□□□□ 0.18
SCAF4-202ENST00000399804 ITPK1Q13572 414 aa16.15■□□□□ 0.18
SCAF4-202ENST00000399804 TBC1D9BQ66K14 1250 aa16.15■□□□□ 0.18
SCAF4-202ENST00000399804 GJD4Q96KN9 370 aaPredicted RBP16.15■□□□□ 0.18
SCAF4-202ENST00000399804 STIM1Q13586 685 aa16.14■□□□□ 0.17
SCAF4-202ENST00000399804 CCDC12Q8WUD4 166 aaPredicted RBP16.14■□□□□ 0.17
SCAF4-202ENST00000399804 TGFBRAP1Q8WUH2 860 aa16.14■□□□□ 0.17
SCAF4-202ENST00000399804 CLCN1P35523 988 aa16.14■□□□□ 0.17
SCAF4-202ENST00000399804 GTF2IP78347 998 aa16.14■□□□□ 0.17
SCAF4-202ENST00000399804 MFSD14BQ5SR56 506 aa16.14■□□□□ 0.17
SCAF4-202ENST00000399804 KNDC1Q76NI1 1749 aa16.14■□□□□ 0.17
SCAF4-202ENST00000399804 SPATA31A5Q5VU36 1347 aa16.14■□□□□ 0.17
SCAF4-202ENST00000399804 SPATA31A7Q8IWB4 1347 aa16.14■□□□□ 0.17
SCAF4-202ENST00000399804 MON2Q7Z3U7 1717 aa16.14■□□□□ 0.17
SCAF4-202ENST00000399804 VPS72Q15906 364 aa16.14■□□□□ 0.17
SCAF4-202ENST00000399804 FAM47AQ5JRC9 791 aa16.14■□□□□ 0.17
SCAF4-202ENST00000399804 KRT40Q6A162 431 aa16.14■□□□□ 0.17
SCAF4-202ENST00000399804 hCG_1642624A0A1W2PR95 340 aa16.13■□□□□ 0.17
SCAF4-202ENST00000399804 ATL3Q6DD88 541 aa16.13■□□□□ 0.17
SCAF4-202ENST00000399804 CELF1Q92879 486 aaKnown RBP16.13■□□□□ 0.17
SCAF4-202ENST00000399804 ARHGEF1Q92888 912 aaKnown RBP16.13■□□□□ 0.17
SCAF4-202ENST00000399804 BSDC1Q9NW68 430 aaPredicted RBP16.13■□□□□ 0.17
SCAF4-202ENST00000399804 STK32BQ9NY57 414 aa16.13■□□□□ 0.17
SCAF4-202ENST00000399804 MAGEC2Q9UBF1 373 aaPredicted RBP16.13■□□□□ 0.17
SCAF4-202ENST00000399804 ZNF445P59923 1031 aa16.13■□□□□ 0.17
SCAF4-202ENST00000399804 ZNF34Q8IZ26 560 aa16.13■□□□□ 0.17
SCAF4-202ENST00000399804 PLA2G12BQ9BX93 195 aa16.13■□□□□ 0.17
SCAF4-202ENST00000399804 GPHNQ9NQX3 736 aaPredicted RBP16.13■□□□□ 0.17
SCAF4-202ENST00000399804 CSF1RP07333 972 aa16.13■□□□□ 0.17
SCAF4-202ENST00000399804 ZNF76P36508 570 aa16.13■□□□□ 0.17
SCAF4-202ENST00000399804 UBA7P41226 1012 aa16.13■□□□□ 0.17
SCAF4-202ENST00000399804 DIS3L2Q8IYB7 885 aaKnown RBP16.13■□□□□ 0.17
SCAF4-202ENST00000399804 CMTR1Q8N1G2 835 aaKnown RBP16.13■□□□□ 0.17
SCAF4-202ENST00000399804 OGFOD1Q8N543 542 aa16.13■□□□□ 0.17
SCAF4-202ENST00000399804 GPT2Q8TD30 523 aa16.13■□□□□ 0.17
SCAF4-202ENST00000399804 CABP5Q9NP86 173 aa16.13■□□□□ 0.17
SCAF4-202ENST00000399804 DEXIO95424 95 aa16.13■□□□□ 0.17
SCAF4-202ENST00000399804 CAVIN2O95810 425 aa16.13■□□□□ 0.17
SCAF4-202ENST00000399804 LCORLQ8N3X6 602 aa16.13■□□□□ 0.17
SCAF4-202ENST00000399804 TTC6Q86TZ1 520 aa16.12■□□□□ 0.17
SCAF4-202ENST00000399804 CLIP2Q9UDT6 1046 aa16.12■□□□□ 0.17
SCAF4-202ENST00000399804 COL5A2P05997 1499 aaPredicted RBP16.12■□□□□ 0.17
SCAF4-202ENST00000399804 CBFA2T2O43439 604 aa16.12■□□□□ 0.17
SCAF4-202ENST00000399804 DYNLL1P63167 89 aaKnown RBP16.12■□□□□ 0.17
SCAF4-202ENST00000399804 TFAP4Q01664 338 aa16.12■□□□□ 0.17
SCAF4-202ENST00000399804 ANO1Q5XXA6 986 aa16.12■□□□□ 0.17
SCAF4-202ENST00000399804 H0YIN7 160 aa16.12■□□□□ 0.17
SCAF4-202ENST00000399804 ZNF654Q8IZM8 581 aa16.12■□□□□ 0.17
SCAF4-202ENST00000399804 NLGN1Q8N2Q7 840 aa16.12■□□□□ 0.17
SCAF4-202ENST00000399804 TTC14Q96N46 770 aa16.12■□□□□ 0.17
SCAF4-202ENST00000399804 CAMTA2O94983 1202 aa16.11■□□□□ 0.17
SCAF4-202ENST00000399804 MINPP1Q9UNW1 487 aa16.11■□□□□ 0.17
SCAF4-202ENST00000399804 KCNJ14Q9UNX9 436 aa16.11■□□□□ 0.17
SCAF4-202ENST00000399804 RBM10P98175 930 aaKnown RBP16.11■□□□□ 0.17
SCAF4-202ENST00000399804 SMARCE1Q969G3 411 aa16.11■□□□□ 0.17
SCAF4-202ENST00000399804 BMP2KQ9NSY1 1161 aaPredicted RBP16.11■□□□□ 0.17
SCAF4-202ENST00000399804 ATP2B4P23634 1241 aa16.11■□□□□ 0.17
SCAF4-202ENST00000399804 NAPAP54920 295 aa16.11■□□□□ 0.17
SCAF4-202ENST00000399804 BARGINQ6ZT62 677 aa16.11■□□□□ 0.17
SCAF4-202ENST00000399804 STRBPQ96SI9 672 aaKnown RBP16.11■□□□□ 0.17
SCAF4-202ENST00000399804 RBM28Q9NW13 759 aaKnown RBP16.11■□□□□ 0.17
SCAF4-202ENST00000399804 SALL3Q9BXA9 1300 aa16.11■□□□□ 0.17
SCAF4-202ENST00000399804 KRT2P35908 639 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms