RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 LLPHQ9BRT6 129 aaKnown RBP18.74■□□□□ 0.59
PHTF1-205ENST00000393357 CCP110O43303 1012 aa18.74■□□□□ 0.59
PHTF1-205ENST00000393357 AXDND1Q5T1B0 1012 aaPredicted RBP18.74■□□□□ 0.59
PHTF1-205ENST00000393357 USPL1Q5W0Q7 1092 aa18.74■□□□□ 0.59
PHTF1-205ENST00000393357 CCDC102BQ68D86 513 aa18.74■□□□□ 0.59
PHTF1-205ENST00000393357 METTL16Q86W50 562 aaKnown RBP18.74■□□□□ 0.59
PHTF1-205ENST00000393357 KCNH3Q9ULD8 1083 aa18.74■□□□□ 0.59
PHTF1-205ENST00000393357 HDAC5Q9UQL6 1122 aa18.74■□□□□ 0.59
PHTF1-205ENST00000393357 MRFAP1Q9Y605 127 aa18.74■□□□□ 0.59
PHTF1-205ENST00000393357 LOC102724159A0A0B4J2E5 919 aa18.73■□□□□ 0.59
PHTF1-205ENST00000393357 ACTN2P35609 894 aa18.73■□□□□ 0.59
PHTF1-205ENST00000393357 PWP2Q15269 919 aaKnown RBP18.73■□□□□ 0.59
PHTF1-205ENST00000393357 USP49Q70CQ1 688 aa18.73■□□□□ 0.59
PHTF1-205ENST00000393357 BMP6P22004 513 aa18.73■□□□□ 0.59
PHTF1-205ENST00000393357 SLC26A6Q9BXS9 759 aa18.73■□□□□ 0.59
PHTF1-205ENST00000393357 FGAP02671 866 aa18.72■□□□□ 0.59
PHTF1-205ENST00000393357 HMGB1P09429 215 aaKnown RBP18.72■□□□□ 0.59
PHTF1-205ENST00000393357 VSNL1P62760 191 aa18.72■□□□□ 0.59
PHTF1-205ENST00000393357 MAP3K9P80192 1104 aa18.72■□□□□ 0.59
PHTF1-205ENST00000393357 KIF23Q02241 960 aaPredicted RBP18.72■□□□□ 0.59
PHTF1-205ENST00000393357 KRT40Q6A162 431 aa18.72■□□□□ 0.59
PHTF1-205ENST00000393357 NLRP2Q9NX02 1062 aa18.72■□□□□ 0.59
PHTF1-205ENST00000393357 SERTAD1Q9UHV2 236 aa18.72■□□□□ 0.59
PHTF1-205ENST00000393357 NRKQ7Z2Y5 1582 aa18.72■□□□□ 0.59
PHTF1-205ENST00000393357 TXLNAP40222 546 aa18.72■□□□□ 0.59
PHTF1-205ENST00000393357 PPFIBP1Q86W92 1011 aa18.72■□□□□ 0.59
PHTF1-205ENST00000393357 MICALL1Q8N3F8 863 aa18.72■□□□□ 0.59
PHTF1-205ENST00000393357 KIF5CO60282 957 aa18.72■□□□□ 0.59
PHTF1-205ENST00000393357 ADORA1P30542 326 aa18.72■□□□□ 0.59
PHTF1-205ENST00000393357 EXOSC10Q01780 885 aaKnown RBP18.72■□□□□ 0.59
PHTF1-205ENST00000393357 SLC35F6Q8N357 371 aa18.72■□□□□ 0.59
PHTF1-205ENST00000393357 TC2NQ8N9U0 490 aa18.72■□□□□ 0.59
PHTF1-205ENST00000393357 IMMTQ16891 758 aaKnown RBP18.71■□□□□ 0.59
PHTF1-205ENST00000393357 KCTD19Q17RG1 926 aaPredicted RBP18.71■□□□□ 0.59
PHTF1-205ENST00000393357 ZNF496Q96IT1 587 aaPredicted RBP18.71■□□□□ 0.59
PHTF1-205ENST00000393357 MPHOSPH8Q99549 860 aa18.71■□□□□ 0.59
PHTF1-205ENST00000393357 HAUS7Q99871 368 aa18.71■□□□□ 0.59
PHTF1-205ENST00000393357 TRIM10Q9UDY6 481 aa18.71■□□□□ 0.59
PHTF1-205ENST00000393357 GUCA1BQ9UMX6 200 aa18.71■□□□□ 0.59
PHTF1-205ENST00000393357 B4E1Z4 1266 aa18.71■□□□□ 0.59
PHTF1-205ENST00000393357 SRGAP2O75044 1071 aa18.71■□□□□ 0.59
PHTF1-205ENST00000393357 TRDNQ13061 729 aa18.71■□□□□ 0.59
PHTF1-205ENST00000393357 TRIM29Q14134 588 aa18.71■□□□□ 0.59
PHTF1-205ENST00000393357 GOLGA6L1Q8N7Z2 621 aa18.71■□□□□ 0.59
PHTF1-205ENST00000393357 FAM204AQ9H8W3 233 aa18.71■□□□□ 0.59
PHTF1-205ENST00000393357 DDX21Q9NR30 783 aaKnown RBP eCLIP18.71■□□□□ 0.59
PHTF1-205ENST00000393357 CMA1P23946 247 aa18.7■□□□□ 0.58
PHTF1-205ENST00000393357 RBL2Q08999 1139 aa18.7■□□□□ 0.58
PHTF1-205ENST00000393357 SPECC1LQ69YQ0 1117 aa18.7■□□□□ 0.58
PHTF1-205ENST00000393357 NOA1Q8NC60 698 aaKnown RBP18.7■□□□□ 0.58
PHTF1-205ENST00000393357 GOLGA5Q8TBA6 731 aa18.7■□□□□ 0.58
PHTF1-205ENST00000393357 BTBD18B2RXH4 712 aa18.7■□□□□ 0.58
PHTF1-205ENST00000393357 IDH1O75874 414 aaKnown RBP18.7■□□□□ 0.58
PHTF1-205ENST00000393357 A1BGP04217 495 aa18.7■□□□□ 0.58
PHTF1-205ENST00000393357 CCDC175P0C221 793 aa18.7■□□□□ 0.58
PHTF1-205ENST00000393357 METAP2P50579 478 aaKnown RBP eCLIP18.7■□□□□ 0.58
PHTF1-205ENST00000393357 TSGA10IPQ3SY00 556 aa18.7■□□□□ 0.58
PHTF1-205ENST00000393357 RAD9BQ6WBX8 426 aa18.7■□□□□ 0.58
PHTF1-205ENST00000393357 PACS2Q86VP3 889 aa18.7■□□□□ 0.58
PHTF1-205ENST00000393357 NUP133Q8WUM0 1156 aa18.7■□□□□ 0.58
PHTF1-205ENST00000393357 PUS7LQ9H0K6 701 aaKnown RBP18.7■□□□□ 0.58
PHTF1-205ENST00000393357 HDAC6Q9UBN7 1215 aa18.7■□□□□ 0.58
PHTF1-205ENST00000393357 NEDD4P46934 1319 aa18.7■□□□□ 0.58
PHTF1-205ENST00000393357 ZNF213O14771 459 aa18.7■□□□□ 0.58
PHTF1-205ENST00000393357 TPM1P09493 284 aa18.7■□□□□ 0.58
PHTF1-205ENST00000393357 MATR3P43243 847 aaKnown RBP eCLIP18.7■□□□□ 0.58
PHTF1-205ENST00000393357 AKAP4Q5JQC9 854 aa18.7■□□□□ 0.58
PHTF1-205ENST00000393357 IGSF22Q8N9C0 903 aa18.7■□□□□ 0.58
PHTF1-205ENST00000393357 SLF1Q9BQI6 1058 aa18.7■□□□□ 0.58
PHTF1-205ENST00000393357 A0A1B0GUL7 405 aa18.69■□□□□ 0.58
PHTF1-205ENST00000393357 A0A1W2PQ27 194 aa18.69■□□□□ 0.58
PHTF1-205ENST00000393357 A0A1W2PQ64 194 aa18.69■□□□□ 0.58
PHTF1-205ENST00000393357 A0A1W2PQD8 194 aa18.69■□□□□ 0.58
PHTF1-205ENST00000393357 TTC31Q49AM3 519 aaPredicted RBP18.69■□□□□ 0.58
PHTF1-205ENST00000393357 TAF7LQ5H9L4 462 aa18.69■□□□□ 0.58
PHTF1-205ENST00000393357 CLTCQ00610 1675 aaKnown RBP18.69■□□□□ 0.58
PHTF1-205ENST00000393357 CSB-PGBD3P0DP91 1061 aa18.69■□□□□ 0.58
PHTF1-205ENST00000393357 VPS16Q9H269 839 aa18.69■□□□□ 0.58
PHTF1-205ENST00000393357 EIF3CLB5ME19 914 aaKnown RBP18.68■□□□□ 0.58
PHTF1-205ENST00000393357 CASP14P31944 242 aa18.68■□□□□ 0.58
PHTF1-205ENST00000393357 LIG3P49916 1009 aa18.68■□□□□ 0.58
PHTF1-205ENST00000393357 TTC39AQ5SRH9 613 aa18.68■□□□□ 0.58
PHTF1-205ENST00000393357 PSMB7Q99436 277 aa18.68■□□□□ 0.58
PHTF1-205ENST00000393357 EIF3CQ99613 913 aaKnown RBP18.68■□□□□ 0.58
PHTF1-205ENST00000393357 TSPYL1Q9H0U9 437 aa18.68■□□□□ 0.58
PHTF1-205ENST00000393357 EHD4Q9H223 541 aa18.68■□□□□ 0.58
PHTF1-205ENST00000393357 DNA2P51530 1060 aa18.68■□□□□ 0.58
PHTF1-205ENST00000393357 SCARF1Q14162 830 aa18.68■□□□□ 0.58
PHTF1-205ENST00000393357 SLC9C2Q5TAH2 1124 aa18.68■□□□□ 0.58
PHTF1-205ENST00000393357 RABGGTAQ92696 567 aa18.68■□□□□ 0.58
PHTF1-205ENST00000393357 SEC31BQ9NQW1 1179 aa18.68■□□□□ 0.58
PHTF1-205ENST00000393357 POLR3EQ9NVU0 708 aa18.68■□□□□ 0.58
PHTF1-205ENST00000393357 YEATS4O95619 227 aa18.68■□□□□ 0.58
PHTF1-205ENST00000393357 NR5A1Q13285 461 aa18.68■□□□□ 0.58
PHTF1-205ENST00000393357 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.68■□□□□ 0.58
PHTF1-205ENST00000393357 TMEM139Q8IV31 216 aa18.68■□□□□ 0.58
PHTF1-205ENST00000393357 TTC5Q8N0Z6 440 aa18.68■□□□□ 0.58
PHTF1-205ENST00000393357 TEX13AQ9BXU3 409 aaPredicted RBP18.68■□□□□ 0.58
PHTF1-205ENST00000393357 ANKZF1Q9H8Y5 726 aa18.68■□□□□ 0.58
PHTF1-205ENST00000393357 AKAP2Q9Y2D5 859 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms