RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 DCTPP1Q9H773 170 aa18.09■□□□□ 0.49
SHANK1-204ENST00000391814 SLC8A1P32418 973 aa18.09■□□□□ 0.49
SHANK1-204ENST00000391814 SLF1Q9BQI6 1058 aa18.09■□□□□ 0.49
SHANK1-204ENST00000391814 CNNM2Q9H8M5 875 aa18.09■□□□□ 0.49
SHANK1-204ENST00000391814 OPHN1O60890 802 aa18.09■□□□□ 0.49
SHANK1-204ENST00000391814 UBE3BQ7Z3V4 1068 aa18.09■□□□□ 0.49
SHANK1-204ENST00000391814 ERMNQ8TAM6 284 aa18.09■□□□□ 0.49
SHANK1-204ENST00000391814 CABP5Q9NP86 173 aa18.09■□□□□ 0.49
SHANK1-204ENST00000391814 HSPA1LP34931 641 aa18.08■□□□□ 0.49
SHANK1-204ENST00000391814 CCT5P48643 541 aa18.08■□□□□ 0.49
SHANK1-204ENST00000391814 ZBTB40Q9NUA8 1239 aa18.08■□□□□ 0.49
SHANK1-204ENST00000391814 ARHGAP6O43182 974 aa18.08■□□□□ 0.49
SHANK1-204ENST00000391814 LEO1Q8WVC0 666 aaPredicted RBP18.08■□□□□ 0.49
SHANK1-204ENST00000391814 ZBTB3Q9H5J0 574 aa18.08■□□□□ 0.49
SHANK1-204ENST00000391814 FAM13AO94988 1023 aa18.08■□□□□ 0.49
SHANK1-204ENST00000391814 VPS52Q8N1B4 723 aa18.08■□□□□ 0.49
SHANK1-204ENST00000391814 CHPF2Q9P2E5 772 aa18.08■□□□□ 0.49
SHANK1-204ENST00000391814 VWA3AA6NCI4 1184 aa18.08■□□□□ 0.48
SHANK1-204ENST00000391814 SESN3P58005 492 aa18.08■□□□□ 0.48
SHANK1-204ENST00000391814 ASIC2Q16515 512 aa18.08■□□□□ 0.48
SHANK1-204ENST00000391814 GPT2Q8TD30 523 aa18.08■□□□□ 0.48
SHANK1-204ENST00000391814 MAPK8IP1Q9UQF2 711 aa18.08■□□□□ 0.48
SHANK1-204ENST00000391814 MSH6P52701 1360 aa18.08■□□□□ 0.48
SHANK1-204ENST00000391814 ZNF174Q15697 407 aa18.08■□□□□ 0.48
SHANK1-204ENST00000391814 CDC37L1Q7L3B6 337 aa18.08■□□□□ 0.48
SHANK1-204ENST00000391814 SPATS2LQ9NUQ6 558 aaKnown RBP18.08■□□□□ 0.48
SHANK1-204ENST00000391814 SSX2IPQ9Y2D8 614 aa18.08■□□□□ 0.48
SHANK1-204ENST00000391814 NDC80O14777 642 aa18.08■□□□□ 0.48
SHANK1-204ENST00000391814 SMIM24O75264 130 aa18.08■□□□□ 0.48
SHANK1-204ENST00000391814 GPTP24298 496 aa18.08■□□□□ 0.48
SHANK1-204ENST00000391814 SNX14Q9Y5W7 946 aa18.08■□□□□ 0.48
SHANK1-204ENST00000391814 GSDMBQ8TAX9 411 aa18.07■□□□□ 0.48
SHANK1-204ENST00000391814 PAG1Q9NWQ8 432 aa18.07■□□□□ 0.48
SHANK1-204ENST00000391814 ECM2O94769 699 aaPredicted RBP18.07■□□□□ 0.48
SHANK1-204ENST00000391814 NAPAP54920 295 aa18.07■□□□□ 0.48
SHANK1-204ENST00000391814 NSD2O96028 1365 aa18.07■□□□□ 0.48
SHANK1-204ENST00000391814 TTC36A6NLP5 189 aa18.07■□□□□ 0.48
SHANK1-204ENST00000391814 CETN3O15182 167 aa18.07■□□□□ 0.48
SHANK1-204ENST00000391814 TSPY3P0CV98 308 aa18.07■□□□□ 0.48
SHANK1-204ENST00000391814 TSPY8P0CW00 308 aa18.07■□□□□ 0.48
SHANK1-204ENST00000391814 PSMD6Q15008 389 aa18.07■□□□□ 0.48
SHANK1-204ENST00000391814 ATL3Q6DD88 541 aa18.07■□□□□ 0.48
SHANK1-204ENST00000391814 XPO4Q9C0E2 1151 aaKnown RBP18.07■□□□□ 0.48
SHANK1-204ENST00000391814 ACTN4O43707 911 aaKnown RBP18.07■□□□□ 0.48
SHANK1-204ENST00000391814 CCDC65Q8IXS2 484 aa18.07■□□□□ 0.48
SHANK1-204ENST00000391814 SMC1BQ8NDV3 1235 aa18.07■□□□□ 0.48
SHANK1-204ENST00000391814 EPSTI1Q96J88 318 aa18.07■□□□□ 0.48
SHANK1-204ENST00000391814 EFCAB8A8MWE9 144 aa18.07■□□□□ 0.48
SHANK1-204ENST00000391814 BEND3Q5T5X7 828 aa18.07■□□□□ 0.48
SHANK1-204ENST00000391814 LRRC8AQ8IWT6 810 aa18.07■□□□□ 0.48
SHANK1-204ENST00000391814 ANKRD42Q8N9B4 389 aa18.07■□□□□ 0.48
SHANK1-204ENST00000391814 HHATQ5VTY9 493 aa18.06■□□□□ 0.48
SHANK1-204ENST00000391814 FAM71BQ8TC56 605 aa18.06■□□□□ 0.48
SHANK1-204ENST00000391814 BCAS4Q8TDM0 211 aa18.06■□□□□ 0.48
SHANK1-204ENST00000391814 PPFIA4O75335 1185 aa18.06■□□□□ 0.48
SHANK1-204ENST00000391814 GAS2L3Q86XJ1 694 aa18.06■□□□□ 0.48
SHANK1-204ENST00000391814 TXNDC16Q9P2K2 825 aa18.06■□□□□ 0.48
SHANK1-204ENST00000391814 TTC41PQ6P2S7 1318 aa18.06■□□□□ 0.48
SHANK1-204ENST00000391814 TBC1D8BQ0IIM8 1120 aa18.06■□□□□ 0.48
SHANK1-204ENST00000391814 PLS1Q14651 629 aa18.06■□□□□ 0.48
SHANK1-204ENST00000391814 MTMR3Q13615 1198 aa18.05■□□□□ 0.48
SHANK1-204ENST00000391814 TMTC2Q8N394 836 aa18.05■□□□□ 0.48
SHANK1-204ENST00000391814 TAB2Q9NYJ8 693 aa18.05■□□□□ 0.48
SHANK1-204ENST00000391814 AKNAD1Q5T1N1 836 aa18.05■□□□□ 0.48
SHANK1-204ENST00000391814 DHX32Q7L7V1 743 aaKnown RBP18.05■□□□□ 0.48
SHANK1-204ENST00000391814 TMOD2Q9NZR1 351 aa18.05■□□□□ 0.48
SHANK1-204ENST00000391814 KCNH3Q9ULD8 1083 aa18.05■□□□□ 0.48
SHANK1-204ENST00000391814 CALM1P0DP23 149 aa18.05■□□□□ 0.48
SHANK1-204ENST00000391814 CALM2P0DP24 149 aa18.05■□□□□ 0.48
SHANK1-204ENST00000391814 CALM3P0DP25 149 aa18.05■□□□□ 0.48
SHANK1-204ENST00000391814 ANO1Q5XXA6 986 aa18.05■□□□□ 0.48
SHANK1-204ENST00000391814 SMARCC2Q8TAQ2 1214 aa18.05■□□□□ 0.48
SHANK1-204ENST00000391814 CEP104O60308 925 aa18.05■□□□□ 0.48
SHANK1-204ENST00000391814 CLTAP09496 248 aa18.05■□□□□ 0.48
SHANK1-204ENST00000391814 DPH6Q7L8W6 267 aa18.05■□□□□ 0.48
SHANK1-204ENST00000391814 ARHGAP24Q8N264 748 aa18.05■□□□□ 0.48
SHANK1-204ENST00000391814 OTUD7AQ8TE49 926 aaPredicted RBP18.05■□□□□ 0.48
SHANK1-204ENST00000391814 FAM204AQ9H8W3 233 aa18.05■□□□□ 0.48
SHANK1-204ENST00000391814 POLR2DO15514 142 aaKnown RBP18.05■□□□□ 0.48
SHANK1-204ENST00000391814 TTLL12Q14166 644 aaPredicted RBP18.05■□□□□ 0.48
SHANK1-204ENST00000391814 LDHAL6AQ6ZMR3 332 aa18.05■□□□□ 0.48
SHANK1-204ENST00000391814 TROQ12816 1431 aaPredicted RBP18.05■□□□□ 0.48
SHANK1-204ENST00000391814 RTL9Q8NET4 1388 aa18.05■□□□□ 0.48
SHANK1-204ENST00000391814 SLC27A2O14975 620 aa18.04■□□□□ 0.48
SHANK1-204ENST00000391814 LUC7L3O95232 432 aaKnown RBP18.04■□□□□ 0.48
SHANK1-204ENST00000391814 DENND2CQ68D51 928 aa18.04■□□□□ 0.48
SHANK1-204ENST00000391814 ESR2Q92731 530 aa18.04■□□□□ 0.48
SHANK1-204ENST00000391814 DESI2Q9BSY9 194 aa18.04■□□□□ 0.48
SHANK1-204ENST00000391814 TSPYL2Q9H2G4 693 aaPredicted RBP18.04■□□□□ 0.48
SHANK1-204ENST00000391814 NUF2Q9BZD4 464 aa18.04■□□□□ 0.48
SHANK1-204ENST00000391814 FAM169AQ9Y6X4 670 aa18.04■□□□□ 0.48
SHANK1-204ENST00000391814 ZNF202O95125 648 aa18.04■□□□□ 0.48
SHANK1-204ENST00000391814 IRX5P78411 483 aaPredicted RBP18.04■□□□□ 0.48
SHANK1-204ENST00000391814 PPP1R21Q6ZMI0 780 aa18.04■□□□□ 0.48
SHANK1-204ENST00000391814 TMTC1Q8IUR5 882 aa18.04■□□□□ 0.48
SHANK1-204ENST00000391814 MAP7Q14244 749 aa18.04■□□□□ 0.48
SHANK1-204ENST00000391814 DTHD1Q6ZMT9 781 aa18.04■□□□□ 0.48
SHANK1-204ENST00000391814 SDCCAG8Q86SQ7 713 aaPredicted RBP18.04■□□□□ 0.48
SHANK1-204ENST00000391814 SPATS2Q86XZ4 545 aaKnown RBP18.04■□□□□ 0.48
SHANK1-204ENST00000391814 VEZTQ9HBM0 779 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms