RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 SPDYE3A6NKU9 549 aa16.6■□□□□ 0.25
PSME4-201ENST00000389993 SIK1P57059 783 aa16.6■□□□□ 0.25
PSME4-201ENST00000389993 C6orf50Q9HD87 102 aa16.6■□□□□ 0.25
PSME4-201ENST00000389993 PARP10Q53GL7 1025 aa16.6■□□□□ 0.25
PSME4-201ENST00000389993 RTL9Q8NET4 1388 aa16.6■□□□□ 0.25
PSME4-201ENST00000389993 TMEM110-MUSTN1A8MSY1 372 aa16.59■□□□□ 0.25
PSME4-201ENST00000389993 ZNF589Q86UQ0 364 aaPredicted RBP16.59■□□□□ 0.25
PSME4-201ENST00000389993 CDC42BPBQ9Y5S2 1711 aa16.59■□□□□ 0.25
PSME4-201ENST00000389993 ZSCAN12O43309 604 aa16.59■□□□□ 0.25
PSME4-201ENST00000389993 COBLO75128 1261 aa16.59■□□□□ 0.25
PSME4-201ENST00000389993 SKILP12757 684 aa16.59■□□□□ 0.25
PSME4-201ENST00000389993 SIRT2Q8IXJ6 389 aa16.59■□□□□ 0.25
PSME4-201ENST00000389993 CPXCR1Q8N123 301 aa16.59■□□□□ 0.25
PSME4-201ENST00000389993 EHMT1Q9H9B1 1298 aa16.59■□□□□ 0.25
PSME4-201ENST00000389993 POLD1P28340 1107 aa16.59■□□□□ 0.25
PSME4-201ENST00000389993 QTRT2Q9H974 415 aaKnown RBP16.59■□□□□ 0.25
PSME4-201ENST00000389993 CTNND2Q9UQB3 1225 aa16.59■□□□□ 0.25
PSME4-201ENST00000389993 RAD50Q92878 1312 aa16.59■□□□□ 0.25
PSME4-201ENST00000389993 CHRNDQ07001 517 aa16.59■□□□□ 0.25
PSME4-201ENST00000389993 CEP135Q66GS9 1140 aa16.59■□□□□ 0.25
PSME4-201ENST00000389993 H0YHG0 523 aa16.59■□□□□ 0.25
PSME4-201ENST00000389993 TXKP42681 527 aa16.59■□□□□ 0.25
PSME4-201ENST00000389993 ERFEQ4G0M1 354 aa16.59■□□□□ 0.25
PSME4-201ENST00000389993 LARGE2Q8N3Y3 721 aa16.58■□□□□ 0.25
PSME4-201ENST00000389993 GOLGA6L10A6NI86 522 aa16.58■□□□□ 0.25
PSME4-201ENST00000389993 POLR2DO15514 142 aaKnown RBP16.58■□□□□ 0.25
PSME4-201ENST00000389993 GJC1P36383 396 aa16.58■□□□□ 0.25
PSME4-201ENST00000389993 STK32BQ9NY57 414 aa16.58■□□□□ 0.25
PSME4-201ENST00000389993 TPCN1Q9ULQ1 816 aa16.58■□□□□ 0.25
PSME4-201ENST00000389993 PPARDQ03181 441 aa16.58■□□□□ 0.24
PSME4-201ENST00000389993 KIAA0825Q8IV33 1275 aa16.58■□□□□ 0.24
PSME4-201ENST00000389993 ANGEL1Q9UNK9 670 aaKnown RBP16.58■□□□□ 0.24
PSME4-201ENST00000389993 USP17L12C9JPN9 530 aa16.58■□□□□ 0.24
PSME4-201ENST00000389993 USP17L21D6R901 530 aa16.58■□□□□ 0.24
PSME4-201ENST00000389993 H0YIN7 160 aa16.58■□□□□ 0.24
PSME4-201ENST00000389993 M0R2C6 588 aa16.58■□□□□ 0.24
PSME4-201ENST00000389993 SSH3Q8TE77 659 aa16.58■□□□□ 0.24
PSME4-201ENST00000389993 MYO6Q9UM54 1294 aa16.58■□□□□ 0.24
PSME4-201ENST00000389993 VTI1AQ96AJ9 217 aa16.57■□□□□ 0.24
PSME4-201ENST00000389993 RNF123Q5XPI4 1314 aa16.57■□□□□ 0.24
PSME4-201ENST00000389993 LRRIQ1Q96JM4 1722 aa16.57■□□□□ 0.24
PSME4-201ENST00000389993 HOXB7P09629 217 aa16.57■□□□□ 0.24
PSME4-201ENST00000389993 BLZF1Q9H2G9 400 aa16.57■□□□□ 0.24
PSME4-201ENST00000389993 IGSF1Q8N6C5 1336 aa16.57■□□□□ 0.24
PSME4-201ENST00000389993 HARSP12081 509 aaKnown RBP16.57■□□□□ 0.24
PSME4-201ENST00000389993 CDR1P51861 262 aa16.57■□□□□ 0.24
PSME4-201ENST00000389993 TFAP4Q01664 338 aa16.57■□□□□ 0.24
PSME4-201ENST00000389993 DBNLQ9UJU6 430 aaKnown RBP16.57■□□□□ 0.24
PSME4-201ENST00000389993 A0A087WWV3 80 aa16.57■□□□□ 0.24
PSME4-201ENST00000389993 ERLIN2O94905 339 aa16.57■□□□□ 0.24
PSME4-201ENST00000389993 DTHD1Q6ZMT9 781 aa16.57■□□□□ 0.24
PSME4-201ENST00000389993 ZBTB38Q8NAP3 1195 aaPredicted RBP16.57■□□□□ 0.24
PSME4-201ENST00000389993 FAM200AQ8TCP9 573 aa16.57■□□□□ 0.24
PSME4-201ENST00000389993 LZTFL1Q9NQ48 299 aa16.57■□□□□ 0.24
PSME4-201ENST00000389993 TRERF1Q96PN7 1200 aa16.57■□□□□ 0.24
PSME4-201ENST00000389993 RPS8P62241 208 aaKnown RBP16.56■□□□□ 0.24
PSME4-201ENST00000389993 LONRF3Q496Y0 759 aa16.56■□□□□ 0.24
PSME4-201ENST00000389993 TCP10L2B9ZVM9 353 aa16.56■□□□□ 0.24
PSME4-201ENST00000389993 PIGBQ92521 554 aa16.56■□□□□ 0.24
PSME4-201ENST00000389993 CAPZA3Q96KX2 299 aa16.56■□□□□ 0.24
PSME4-201ENST00000389993 DNAI1Q9UI46 699 aa16.56■□□□□ 0.24
PSME4-201ENST00000389993 ADD1P35611 737 aaKnown RBP16.56■□□□□ 0.24
PSME4-201ENST00000389993 RASEFQ8IZ41 740 aa16.56■□□□□ 0.24
PSME4-201ENST00000389993 DYNLL1P63167 89 aaKnown RBP16.56■□□□□ 0.24
PSME4-201ENST00000389993 SEPT7Q16181 437 aaKnown RBP16.56■□□□□ 0.24
PSME4-201ENST00000389993 HSPA4P34932 840 aa16.56■□□□□ 0.24
PSME4-201ENST00000389993 UBXN1Q04323 297 aa16.56■□□□□ 0.24
PSME4-201ENST00000389993 MFSD14BQ5SR56 506 aa16.56■□□□□ 0.24
PSME4-201ENST00000389993 TRMT2AQ8IZ69 625 aaKnown RBP16.56■□□□□ 0.24
PSME4-201ENST00000389993 PTPN21Q16825 1174 aa16.55■□□□□ 0.24
PSME4-201ENST00000389993 LRRC47Q8N1G4 583 aaKnown RBP16.55■□□□□ 0.24
PSME4-201ENST00000389993 HLFQ16534 295 aa16.55■□□□□ 0.24
PSME4-201ENST00000389993 DIS3L2Q8IYB7 885 aaKnown RBP16.55■□□□□ 0.24
PSME4-201ENST00000389993 TTF2Q9UNY4 1162 aaKnown RBP16.55■□□□□ 0.24
PSME4-201ENST00000389993 KRI1Q8N9T8 703 aaKnown RBP16.55■□□□□ 0.24
PSME4-201ENST00000389993 TRPM1Q7Z4N2 1603 aa16.55■□□□□ 0.24
PSME4-201ENST00000389993 MYCLP12524 364 aaPredicted RBP16.55■□□□□ 0.24
PSME4-201ENST00000389993 FAM196AQ6ZSG2 479 aa16.55■□□□□ 0.24
PSME4-201ENST00000389993 DYMQ7RTS9 669 aa16.55■□□□□ 0.24
PSME4-201ENST00000389993 BIN2Q9UBW5 565 aaPredicted RBP16.55■□□□□ 0.24
PSME4-201ENST00000389993 SPHKAPQ2M3C7 1700 aa16.55■□□□□ 0.24
PSME4-201ENST00000389993 VPS16Q9H269 839 aa16.55■□□□□ 0.24
PSME4-201ENST00000389993 MAP3K4Q9Y6R4 1608 aa16.55■□□□□ 0.24
PSME4-201ENST00000389993 KIF20AO95235 890 aa16.54■□□□□ 0.24
PSME4-201ENST00000389993 ATP5JP18859 108 aa16.54■□□□□ 0.24
PSME4-201ENST00000389993 DCAF17Q5H9S7 520 aaPredicted RBP16.54■□□□□ 0.24
PSME4-201ENST00000389993 NBPF14Q5TI25 921 aa16.54■□□□□ 0.24
PSME4-201ENST00000389993 GPKOWQ92917 476 aaPredicted RBP eCLIP16.54■□□□□ 0.242e-6■■■□□ 14.9
PSME4-201ENST00000389993 EYA3Q99504 573 aa16.54■□□□□ 0.24
PSME4-201ENST00000389993 BABAM1Q9NWV8 329 aa16.54■□□□□ 0.24
PSME4-201ENST00000389993 MROH5Q6ZUA9 1318 aa16.54■□□□□ 0.24
PSME4-201ENST00000389993 PRKAB2O43741 272 aa16.54■□□□□ 0.24
PSME4-201ENST00000389993 HSPD1P10809 573 aaKnown RBP16.54■□□□□ 0.24
PSME4-201ENST00000389993 KANK3Q6NY19 840 aa16.54■□□□□ 0.24
PSME4-201ENST00000389993 LEKR1Q6ZMV7 388 aa16.54■□□□□ 0.24
PSME4-201ENST00000389993 IBTKQ9P2D0 1353 aaPredicted RBP16.54■□□□□ 0.24
PSME4-201ENST00000389993 CA8P35219 290 aa16.54■□□□□ 0.24
PSME4-201ENST00000389993 MRVI1Q9Y6F6 885 aa16.54■□□□□ 0.24
PSME4-201ENST00000389993 TET3O43151 1660 aa16.54■□□□□ 0.24
PSME4-201ENST00000389993 NEBLO76041 1014 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms