RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 PPIP5K1Q6PFW1 1433 aa10.74□□□□□ -0.69
SNX1-202ENST00000380285 HOXB7P09629 217 aa10.74□□□□□ -0.69
SNX1-202ENST00000380285 SYNRGQ9UMZ2 1314 aa10.74□□□□□ -0.69
SNX1-202ENST00000380285 DEXIO95424 95 aa10.74□□□□□ -0.69
SNX1-202ENST00000380285 ZFP91Q96JP5 570 aaPredicted RBP10.74□□□□□ -0.69
SNX1-202ENST00000380285 TM6SF1Q9BZW5 370 aa10.74□□□□□ -0.69
SNX1-202ENST00000380285 SAMM50Q9Y512 469 aa10.74□□□□□ -0.69
SNX1-202ENST00000380285 ZC3H6P61129 1189 aaKnown RBP10.74□□□□□ -0.69
SNX1-202ENST00000380285 FANCCQ00597 558 aa10.74□□□□□ -0.69
SNX1-202ENST00000380285 ANO1Q5XXA6 986 aa10.74□□□□□ -0.69
SNX1-202ENST00000380285 HEATR3Q7Z4Q2 680 aa10.74□□□□□ -0.69
SNX1-202ENST00000380285 SH2D4BQ5SQS7 431 aa10.74□□□□□ -0.69
SNX1-202ENST00000380285 STX8Q9UNK0 236 aa10.74□□□□□ -0.69
SNX1-202ENST00000380285 BUB1BO60566 1050 aaPredicted RBP10.74□□□□□ -0.69
SNX1-202ENST00000380285 IRX4P78413 519 aa10.74□□□□□ -0.69
SNX1-202ENST00000380285 WHAMMP3Q1A5X7 153 aa10.74□□□□□ -0.69
SNX1-202ENST00000380285 BCAP29Q9UHQ4 241 aa10.74□□□□□ -0.69
SNX1-202ENST00000380285 GCC2Q8IWJ2 1684 aa10.73□□□□□ -0.69
SNX1-202ENST00000380285 SV2BQ7L1I2 683 aa10.73□□□□□ -0.69
SNX1-202ENST00000380285 MAP3K5Q99683 1374 aa10.73□□□□□ -0.69
SNX1-202ENST00000380285 CYP7A1P22680 504 aa10.73□□□□□ -0.69
SNX1-202ENST00000380285 SARNPP82979 210 aaKnown RBP10.73□□□□□ -0.69
SNX1-202ENST00000380285 CFAP221Q4G0U5 840 aa10.73□□□□□ -0.69
SNX1-202ENST00000380285 FEZ2Q9UHY8 353 aaPredicted RBP10.73□□□□□ -0.69
SNX1-202ENST00000380285 B4DLN1 442 aa10.73□□□□□ -0.69
SNX1-202ENST00000380285 FAM13AO94988 1023 aa10.73□□□□□ -0.69
SNX1-202ENST00000380285 EPB41P11171 864 aaKnown RBP10.73□□□□□ -0.69
SNX1-202ENST00000380285 MRPL12P52815 198 aaKnown RBP10.73□□□□□ -0.69
SNX1-202ENST00000380285 CCDC84Q86UT8 332 aaPredicted RBP10.73□□□□□ -0.69
SNX1-202ENST00000380285 FRMD4BQ9Y2L6 1034 aa10.73□□□□□ -0.69
SNX1-202ENST00000380285 IBTKQ9P2D0 1353 aaPredicted RBP10.73□□□□□ -0.69
SNX1-202ENST00000380285 DENND4BO75064 1496 aaPredicted RBP10.73□□□□□ -0.69
SNX1-202ENST00000380285 PHACTR2O75167 634 aa10.73□□□□□ -0.69
SNX1-202ENST00000380285 SLC9C2Q5TAH2 1124 aa10.73□□□□□ -0.69
SNX1-202ENST00000380285 KCNK9Q9NPC2 374 aa10.73□□□□□ -0.69
SNX1-202ENST00000380285 KCNH3Q9ULD8 1083 aa10.73□□□□□ -0.69
SNX1-202ENST00000380285 PCK1P35558 622 aa10.73□□□□□ -0.69
SNX1-202ENST00000380285 NEDD9Q14511 834 aa10.73□□□□□ -0.69
SNX1-202ENST00000380285 GABPB2Q8TAK5 448 aaPredicted RBP10.73□□□□□ -0.69
SNX1-202ENST00000380285 SECISBP2LQ93073 1101 aaKnown RBP10.73□□□□□ -0.69
SNX1-202ENST00000380285 CBX8Q9HC52 389 aa10.73□□□□□ -0.69
SNX1-202ENST00000380285 MRVI1Q9Y6F6 885 aa10.73□□□□□ -0.69
SNX1-202ENST00000380285 CFAP157Q5JU67 520 aa10.73□□□□□ -0.69
SNX1-202ENST00000380285 CCDC63Q8NA47 563 aa10.72□□□□□ -0.69
SNX1-202ENST00000380285 MAIP1Q8WWC4 291 aa10.72□□□□□ -0.69
SNX1-202ENST00000380285 KDM5DQ9BY66 1539 aa10.72□□□□□ -0.69
SNX1-202ENST00000380285 SPDYE3A6NKU9 549 aa10.72□□□□□ -0.69
SNX1-202ENST00000380285 CCDC38Q502W7 563 aa10.72□□□□□ -0.69
SNX1-202ENST00000380285 LMBRD1Q9NUN5 540 aa10.72□□□□□ -0.69
SNX1-202ENST00000380285 MAGEB6P1A0A0J9YX57 407 aa10.72□□□□□ -0.69
SNX1-202ENST00000380285 EFCAB8A8MWE9 144 aa10.72□□□□□ -0.69
SNX1-202ENST00000380285 ZBTB7BO15156 539 aaPredicted RBP10.72□□□□□ -0.69
SNX1-202ENST00000380285 VIMP08670 466 aaKnown RBP10.72□□□□□ -0.69
SNX1-202ENST00000380285 APBA1Q02410 837 aa10.72□□□□□ -0.69
SNX1-202ENST00000380285 ELF2Q15723 593 aa10.72□□□□□ -0.69
SNX1-202ENST00000380285 NOC4LQ9BVI4 516 aaKnown RBP10.72□□□□□ -0.69
SNX1-202ENST00000380285 SNRKQ9NRH2 765 aa10.72□□□□□ -0.69
SNX1-202ENST00000380285 FAM83GA6ND36 823 aa10.72□□□□□ -0.69
SNX1-202ENST00000380285 GMNNO75496 209 aa10.72□□□□□ -0.69
SNX1-202ENST00000380285 RAPGEF3O95398 923 aa10.72□□□□□ -0.69
SNX1-202ENST00000380285 TBC1D8BQ0IIM8 1120 aa10.72□□□□□ -0.69
SNX1-202ENST00000380285 SLC9C1Q4G0N8 1177 aa10.72□□□□□ -0.69
SNX1-202ENST00000380285 C8orf58Q8NAV2 365 aa10.72□□□□□ -0.69
SNX1-202ENST00000380285 RAB3IPQ96QF0 476 aaPredicted RBP10.72□□□□□ -0.69
SNX1-202ENST00000380285 CLNS1AP54105 237 aaKnown RBP10.72□□□□□ -0.69
SNX1-202ENST00000380285 NBPF6Q5VWK0 638 aa10.72□□□□□ -0.69
SNX1-202ENST00000380285 NBPF4Q96M43 638 aa10.72□□□□□ -0.69
SNX1-202ENST00000380285 SLC8A1P32418 973 aa10.72□□□□□ -0.69
SNX1-202ENST00000380285 APOBRQ0VD83 1088 aa10.72□□□□□ -0.69
SNX1-202ENST00000380285 CCDC62Q6P9F0 684 aa10.72□□□□□ -0.69
SNX1-202ENST00000380285 GOLGA8KD6RF30 607 aa10.71□□□□□ -0.69
SNX1-202ENST00000380285 LEO1Q8WVC0 666 aaPredicted RBP10.71□□□□□ -0.69
SNX1-202ENST00000380285 RAB17Q9H0T7 212 aa10.71□□□□□ -0.69
SNX1-202ENST00000380285 MSH6P52701 1360 aa10.71□□□□□ -0.69
SNX1-202ENST00000380285 AFAP1L2Q8N4X5 818 aa10.71□□□□□ -0.69
SNX1-202ENST00000380285 MIPOL1Q8TD10 442 aa10.71□□□□□ -0.69
SNX1-202ENST00000380285 LRRC2Q9BYS8 371 aa10.71□□□□□ -0.69
SNX1-202ENST00000380285 ZBTB3Q9H5J0 574 aa10.71□□□□□ -0.69
SNX1-202ENST00000380285 VAT1LQ9HCJ6 419 aa10.71□□□□□ -0.69
SNX1-202ENST00000380285 ACEP12821 1306 aa10.71□□□□□ -0.69
SNX1-202ENST00000380285 PAK1Q13153 545 aa10.71□□□□□ -0.69
SNX1-202ENST00000380285 INF2Q27J81 1249 aa10.71□□□□□ -0.69
SNX1-202ENST00000380285 TRPM2O94759 1503 aa10.71□□□□□ -0.69
SNX1-202ENST00000380285 OAS2P29728 719 aaKnown RBP10.71□□□□□ -0.69
SNX1-202ENST00000380285 IDI1Q13907 227 aa10.71□□□□□ -0.69
SNX1-202ENST00000380285 CABS1Q96KC9 395 aa10.71□□□□□ -0.69
SNX1-202ENST00000380285 NPATQ14207 1427 aa10.71□□□□□ -0.7
SNX1-202ENST00000380285 CALUO43852 315 aaPredicted RBP10.71□□□□□ -0.7
SNX1-202ENST00000380285 U2AF2P26368 475 aaKnown RBP eCLIP10.71□□□□□ -0.73e-7■■■■□ 21.1
SNX1-202ENST00000380285 MAP3K21Q5TCX8 1036 aa10.71□□□□□ -0.7
SNX1-202ENST00000380285 AMOTL2Q9Y2J4 779 aa10.71□□□□□ -0.7
SNX1-202ENST00000380285 TEX14Q8IWB6 1497 aa10.71□□□□□ -0.7
SNX1-202ENST00000380285 EEF2P13639 858 aaKnown RBP10.71□□□□□ -0.7
SNX1-202ENST00000380285 ERCC5P28715 1186 aaPredicted RBP10.71□□□□□ -0.7
SNX1-202ENST00000380285 CDC25BP30305 580 aa10.71□□□□□ -0.7
SNX1-202ENST00000380285 TRPC3Q13507 836 aa10.71□□□□□ -0.7
SNX1-202ENST00000380285 CARD6Q9BX69 1037 aa10.71□□□□□ -0.7
SNX1-202ENST00000380285 A0A1B0GVL5 298 aa10.7□□□□□ -0.7
SNX1-202ENST00000380285 GAS8O95995 478 aa10.7□□□□□ -0.7
SNX1-202ENST00000380285 HSP90AA4PQ58FG1 418 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 158.7 ms