RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 EPB41L4AQ9HCS5 686 aaPredicted RBP29.17■■■□□ 2.26
ECHDC3-201ENST00000379215 ZNF277Q9NRM2 450 aaPredicted RBP29.17■■■□□ 2.26
ECHDC3-201ENST00000379215 ATP8A2Q9NTI2 1148 aa29.17■■■□□ 2.26
ECHDC3-201ENST00000379215 CHD4Q14839 1912 aa29.17■■■□□ 2.26
ECHDC3-201ENST00000379215 MYO3BQ8WXR4 1341 aa29.17■■■□□ 2.26
ECHDC3-201ENST00000379215 DYNLL1P63167 89 aaKnown RBP29.16■■■□□ 2.26
ECHDC3-201ENST00000379215 DIXDC1Q155Q3 683 aa29.16■■■□□ 2.26
ECHDC3-201ENST00000379215 NIM1KQ8IY84 436 aa29.16■■■□□ 2.26
ECHDC3-201ENST00000379215 GPR75-ASB3A0A0A6YYF3 556 aa29.16■■■□□ 2.26
ECHDC3-201ENST00000379215 CERS5Q8N5B7 392 aa29.16■■■□□ 2.26
ECHDC3-201ENST00000379215 MRIQ9BWK5 157 aa29.16■■■□□ 2.26
ECHDC3-201ENST00000379215 PDRG1Q9NUG6 133 aa29.16■■■□□ 2.26
ECHDC3-201ENST00000379215 TTF2Q9UNY4 1162 aaKnown RBP29.16■■■□□ 2.26
ECHDC3-201ENST00000379215 E7EWF7 191 aa29.15■■■□□ 2.26
ECHDC3-201ENST00000379215 PRKAB2O43741 272 aa29.15■■■□□ 2.26
ECHDC3-201ENST00000379215 CD2BP2O95400 341 aaKnown RBP29.15■■■□□ 2.26
ECHDC3-201ENST00000379215 RPS6KB1P23443 525 aa29.15■■■□□ 2.26
ECHDC3-201ENST00000379215 NLGN2Q8NFZ4 835 aa29.15■■■□□ 2.26
ECHDC3-201ENST00000379215 TTC14Q96N46 770 aa29.15■■■□□ 2.26
ECHDC3-201ENST00000379215 ALDH8A1Q9H2A2 487 aaPredicted RBP29.15■■■□□ 2.26
ECHDC3-201ENST00000379215 FER1L6Q2WGJ9 1857 aa29.14■■■□□ 2.26
ECHDC3-201ENST00000379215 HDLBPQ00341 1268 aaKnown RBP29.14■■■□□ 2.26
ECHDC3-201ENST00000379215 ANKRD1Q15327 319 aa29.14■■■□□ 2.26
ECHDC3-201ENST00000379215 LAMA4Q16363 1823 aa29.13■■■□□ 2.25
ECHDC3-201ENST00000379215 HHIPL2Q6UWX4 724 aa29.13■■■□□ 2.25
ECHDC3-201ENST00000379215 ZNRF3Q9ULT6 936 aa29.13■■■□□ 2.25
ECHDC3-201ENST00000379215 BTDP43251 543 aa29.12■■■□□ 2.25
ECHDC3-201ENST00000379215 TRDNQ13061 729 aa29.12■■■□□ 2.25
ECHDC3-201ENST00000379215 SDR42E1Q8WUS8 393 aa29.12■■■□□ 2.25
ECHDC3-201ENST00000379215 TEKT1Q969V4 418 aa29.12■■■□□ 2.25
ECHDC3-201ENST00000379215 TAF6LQ9Y6J9 622 aa29.12■■■□□ 2.25
ECHDC3-201ENST00000379215 ARFGEF1Q9Y6D6 1849 aa29.12■■■□□ 2.25
ECHDC3-201ENST00000379215 SLC4A3P48751 1232 aa29.12■■■□□ 2.25
ECHDC3-201ENST00000379215 HAND2P61296 217 aa29.12■■■□□ 2.25
ECHDC3-201ENST00000379215 JDP2Q8WYK2 163 aa29.12■■■□□ 2.25
ECHDC3-201ENST00000379215 YDJCA8MPS7 323 aa29.11■■■□□ 2.25
ECHDC3-201ENST00000379215 STOX1Q6ZVD7 989 aa29.11■■■□□ 2.25
ECHDC3-201ENST00000379215 RALYLQ86SE5 291 aaKnown RBP29.11■■■□□ 2.25
ECHDC3-201ENST00000379215 NCOA7Q8NI08 942 aa29.11■■■□□ 2.25
ECHDC3-201ENST00000379215 RNF41Q9H4P4 317 aaPredicted RBP29.11■■■□□ 2.25
ECHDC3-201ENST00000379215 ARPP21Q9UBL0 812 aaPredicted RBP29.11■■■□□ 2.25
ECHDC3-201ENST00000379215 MYH2Q9UKX2 1941 aa29.11■■■□□ 2.25
ECHDC3-201ENST00000379215 NFKBIEO00221 500 aa29.1■■■□□ 2.25
ECHDC3-201ENST00000379215 DHX32Q7L7V1 743 aaKnown RBP29.1■■■□□ 2.25
ECHDC3-201ENST00000379215 FHDC1Q9C0D6 1143 aaPredicted RBP29.1■■■□□ 2.25
ECHDC3-201ENST00000379215 ANAPC4Q9UJX5 808 aa29.1■■■□□ 2.25
ECHDC3-201ENST00000379215 DAGLAQ9Y4D2 1042 aa29.1■■■□□ 2.25
ECHDC3-201ENST00000379215 USP5P45974 858 aa29.09■■■□□ 2.25
ECHDC3-201ENST00000379215 CNNM2Q9H8M5 875 aa29.09■■■□□ 2.25
ECHDC3-201ENST00000379215 DCP1AQ9NPI6 582 aaPredicted RBP29.09■■■□□ 2.25
ECHDC3-201ENST00000379215 KCNQ5Q9NR82 932 aa29.09■■■□□ 2.25
ECHDC3-201ENST00000379215 TIAM2Q8IVF5 1701 aa29.09■■■□□ 2.25
ECHDC3-201ENST00000379215 F8W031 263 aaPredicted RBP29.09■■■□□ 2.25
ECHDC3-201ENST00000379215 HSP90AA1P07900 732 aaKnown RBP29.09■■■□□ 2.25
ECHDC3-201ENST00000379215 PCP11498 1178 aaKnown RBP29.09■■■□□ 2.25
ECHDC3-201ENST00000379215 AK2P54819 239 aa29.09■■■□□ 2.25
ECHDC3-201ENST00000379215 AMOTL1Q8IY63 956 aa29.09■■■□□ 2.25
ECHDC3-201ENST00000379215 PSME4Q14997 1843 aa29.09■■■□□ 2.25
ECHDC3-201ENST00000379215 SCN9AQ15858 1988 aa29.08■■■□□ 2.25
ECHDC3-201ENST00000379215 WDR19Q8NEZ3 1342 aa29.08■■■□□ 2.25
ECHDC3-201ENST00000379215 SH3RF3Q8TEJ3 882 aaPredicted RBP29.08■■■□□ 2.25
ECHDC3-201ENST00000379215 MXD3Q9BW11 206 aa29.08■■■□□ 2.25
ECHDC3-201ENST00000379215 SERPINA10Q9UK55 444 aa29.08■■■□□ 2.25
ECHDC3-201ENST00000379215 LIMCH1Q9UPQ0 1083 aa29.08■■■□□ 2.25
ECHDC3-201ENST00000379215 PPARAQ07869 468 aa29.07■■■□□ 2.24
ECHDC3-201ENST00000379215 SBK1Q52WX2 424 aa29.07■■■□□ 2.24
ECHDC3-201ENST00000379215 RSBN1LQ6PCB5 846 aaPredicted RBP29.07■■■□□ 2.24
ECHDC3-201ENST00000379215 STAG1Q8WVM7 1258 aa29.07■■■□□ 2.24
ECHDC3-201ENST00000379215 ZNF646O15015 1829 aaPredicted RBP29.07■■■□□ 2.24
ECHDC3-201ENST00000379215 SLC3A2P08195 630 aaKnown RBP29.06■■■□□ 2.24
ECHDC3-201ENST00000379215 VIL1P09327 827 aaKnown RBP29.06■■■□□ 2.24
ECHDC3-201ENST00000379215 CPA1P15085 419 aa29.06■■■□□ 2.24
ECHDC3-201ENST00000379215 NT5C2P49902 561 aa29.06■■■□□ 2.24
ECHDC3-201ENST00000379215 AKNAD1Q5T1N1 836 aa29.06■■■□□ 2.24
ECHDC3-201ENST00000379215 TEX11Q8IYF3 940 aa29.06■■■□□ 2.24
ECHDC3-201ENST00000379215 ZSCAN31Q96LW9 406 aaPredicted RBP29.06■■■□□ 2.24
ECHDC3-201ENST00000379215 ZDHHC15Q96MV8 337 aa29.06■■■□□ 2.24
ECHDC3-201ENST00000379215 KRT23Q9C075 422 aa29.06■■■□□ 2.24
ECHDC3-201ENST00000379215 MCM5P33992 734 aa29.05■■■□□ 2.24
ECHDC3-201ENST00000379215 CRKP46108 304 aa29.05■■■□□ 2.24
ECHDC3-201ENST00000379215 MFSD6Q6ZSS7 791 aa29.05■■■□□ 2.24
ECHDC3-201ENST00000379215 TBC1D10CQ8IV04 446 aa29.05■■■□□ 2.24
ECHDC3-201ENST00000379215 KIAA0825Q8IV33 1275 aa29.05■■■□□ 2.24
ECHDC3-201ENST00000379215 NBPF3Q9H094 633 aa29.05■■■□□ 2.24
ECHDC3-201ENST00000379215 TMX3Q96JJ7 454 aa29.05■■■□□ 2.24
ECHDC3-201ENST00000379215 SH2B1Q9NRF2 756 aaPredicted RBP29.05■■■□□ 2.24
ECHDC3-201ENST00000379215 MMP14P50281 582 aa29.04■■■□□ 2.24
ECHDC3-201ENST00000379215 RHBDL3P58872 404 aa29.04■■■□□ 2.24
ECHDC3-201ENST00000379215 FGD1P98174 961 aa29.04■■■□□ 2.24
ECHDC3-201ENST00000379215 CTR9Q6PD62 1173 aa29.04■■■□□ 2.24
ECHDC3-201ENST00000379215 FBXL16Q8N461 479 aa29.04■■■□□ 2.24
ECHDC3-201ENST00000379215 HDAC9Q9UKV0 1011 aa29.04■■■□□ 2.24
ECHDC3-201ENST00000379215 COL4A5P29400 1685 aa29.04■■■□□ 2.24
ECHDC3-201ENST00000379215 MINDY4BA8MYZ0 360 aa29.03■■■□□ 2.24
ECHDC3-201ENST00000379215 SCNN1DP51172 638 aa29.03■■■□□ 2.24
ECHDC3-201ENST00000379215 EXOSC10Q01780 885 aaKnown RBP29.03■■■□□ 2.24
ECHDC3-201ENST00000379215 MB21D2Q8IYB1 491 aaPredicted RBP29.03■■■□□ 2.24
ECHDC3-201ENST00000379215 AGBL3Q8NEM8 1001 aa29.03■■■□□ 2.24
ECHDC3-201ENST00000379215 MKRN1Q9UHC7 482 aaKnown RBP29.03■■■□□ 2.24
ECHDC3-201ENST00000379215 PSMD14O00487 310 aa29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 275.3 ms