RNA–Protein interactions for RNA: ENST00000378823.7

RAD50-201, Transcript of RAD50 double strand break repair protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAD50, Length 8,306 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-201ENST00000378823 NAPGQ99747 312 aaPredicted RBP12.56□□□□□ -0.4
RAD50-201ENST00000378823 NYXQ9GZU5 481 aa12.56□□□□□ -0.4
RAD50-201ENST00000378823 PFDN4Q9NQP4 134 aa12.56□□□□□ -0.4
RAD50-201ENST00000378823 MCM9Q9NXL9 1143 aa12.56□□□□□ -0.4
RAD50-201ENST00000378823 GIPC1O14908 333 aa12.55□□□□□ -0.4
RAD50-201ENST00000378823 AKNAD1Q5T1N1 836 aa12.55□□□□□ -0.4
RAD50-201ENST00000378823 SV2BQ7L1I2 683 aa12.55□□□□□ -0.4
RAD50-201ENST00000378823 NOS1P29475 1434 aa12.55□□□□□ -0.4
RAD50-201ENST00000378823 APOBRQ0VD83 1088 aa12.55□□□□□ -0.4
RAD50-201ENST00000378823 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.55□□□□□ -0.4
RAD50-201ENST00000378823 LMNTD2Q8IXW0 634 aa12.55□□□□□ -0.4
RAD50-201ENST00000378823 XAGE3Q8WTP9 111 aa12.55□□□□□ -0.4
RAD50-201ENST00000378823 ERO1AQ96HE7 468 aa12.55□□□□□ -0.4
RAD50-201ENST00000378823 SPOPO43791 374 aa12.55□□□□□ -0.4
RAD50-201ENST00000378823 SLC8A3P57103 927 aa12.55□□□□□ -0.4
RAD50-201ENST00000378823 GKAP1Q5VSY0 366 aaPredicted RBP12.55□□□□□ -0.4
RAD50-201ENST00000378823 ITIH3Q06033 890 aa12.55□□□□□ -0.4
RAD50-201ENST00000378823 CD109Q6YHK3 1445 aa12.55□□□□□ -0.4
RAD50-201ENST00000378823 POTEDQ86YR6 584 aa12.55□□□□□ -0.4
RAD50-201ENST00000378823 AFAP1L2Q8N4X5 818 aa12.55□□□□□ -0.4
RAD50-201ENST00000378823 CTNND2Q9UQB3 1225 aa12.55□□□□□ -0.4
RAD50-201ENST00000378823 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.55□□□□□ -0.4
RAD50-201ENST00000378823 FAM160A1Q05DH4 1040 aa12.55□□□□□ -0.4
RAD50-201ENST00000378823 NOC4LQ9BVI4 516 aaKnown RBP12.55□□□□□ -0.4
RAD50-201ENST00000378823 MYH10P35580 1976 aa12.55□□□□□ -0.4
RAD50-201ENST00000378823 DISP3Q9P2K9 1392 aa12.55□□□□□ -0.4
RAD50-201ENST00000378823 TNNI2P48788 182 aa12.55□□□□□ -0.4
RAD50-201ENST00000378823 ZRANB1Q9UGI0 708 aa12.55□□□□□ -0.4
RAD50-201ENST00000378823 IQSEC3Q9UPP2 1182 aaPredicted RBP12.55□□□□□ -0.4
RAD50-201ENST00000378823 F8W031 263 aaPredicted RBP12.54□□□□□ -0.4
RAD50-201ENST00000378823 SMTNP53814 917 aa12.54□□□□□ -0.4
RAD50-201ENST00000378823 ATP8B2P98198 1209 aa12.54□□□□□ -0.4
RAD50-201ENST00000378823 CEP120Q8N960 986 aa12.54□□□□□ -0.4
RAD50-201ENST00000378823 IGSF22Q8N9C0 903 aa12.54□□□□□ -0.4
RAD50-201ENST00000378823 A0A1B0GVL5 298 aa12.54□□□□□ -0.4
RAD50-201ENST00000378823 KRT28Q7Z3Y7 464 aa12.54□□□□□ -0.4
RAD50-201ENST00000378823 GBP7Q8N8V2 638 aaPredicted RBP12.54□□□□□ -0.4
RAD50-201ENST00000378823 HAUS7Q99871 368 aa12.54□□□□□ -0.4
RAD50-201ENST00000378823 PTPDC1A2A3K4 754 aa12.54□□□□□ -0.4
RAD50-201ENST00000378823 TRAF5O00463 557 aa12.54□□□□□ -0.4
RAD50-201ENST00000378823 KSR2Q6VAB6 950 aa12.54□□□□□ -0.4
RAD50-201ENST00000378823 COPS6Q7L5N1 327 aa12.54□□□□□ -0.4
RAD50-201ENST00000378823 SMC5Q8IY18 1101 aa12.54□□□□□ -0.4
RAD50-201ENST00000378823 VCXQ9H320 206 aa12.54□□□□□ -0.4
RAD50-201ENST00000378823 FEZ2Q9UHY8 353 aaPredicted RBP12.54□□□□□ -0.4
RAD50-201ENST00000378823 ANXA1P04083 346 aa12.54□□□□□ -0.4
RAD50-201ENST00000378823 SATB1Q01826 763 aa12.54□□□□□ -0.4
RAD50-201ENST00000378823 ARHGEF2Q92974 986 aaKnown RBP12.54□□□□□ -0.4
RAD50-201ENST00000378823 FNBP1Q96RU3 617 aa12.54□□□□□ -0.4
RAD50-201ENST00000378823 TTC36A6NLP5 189 aa12.54□□□□□ -0.4
RAD50-201ENST00000378823 STK10O94804 968 aaKnown RBP12.54□□□□□ -0.4
RAD50-201ENST00000378823 RASA3Q14644 834 aa12.54□□□□□ -0.4
RAD50-201ENST00000378823 PLCD1P51178 756 aa12.54□□□□□ -0.4
RAD50-201ENST00000378823 TAF12Q16514 161 aa12.54□□□□□ -0.4
RAD50-201ENST00000378823 CLGNO14967 610 aa12.53□□□□□ -0.4
RAD50-201ENST00000378823 CCNT1O60563 726 aaKnown RBP12.53□□□□□ -0.4
RAD50-201ENST00000378823 UTP14CQ5TAP6 766 aaKnown RBP12.53□□□□□ -0.4
RAD50-201ENST00000378823 MCUR1Q96AQ8 359 aa12.53□□□□□ -0.4
RAD50-201ENST00000378823 IMPACTQ9P2X3 320 aa12.53□□□□□ -0.4
RAD50-201ENST00000378823 TTF2Q9UNY4 1162 aaKnown RBP12.53□□□□□ -0.4
RAD50-201ENST00000378823 ATP6V1AP38606 617 aa12.53□□□□□ -0.4
RAD50-201ENST00000378823 TBC1D8BQ0IIM8 1120 aa12.53□□□□□ -0.4
RAD50-201ENST00000378823 RUFY4Q6ZNE9 571 aa12.53□□□□□ -0.4
RAD50-201ENST00000378823 CCDC117Q8IWD4 279 aaPredicted RBP12.53□□□□□ -0.4
RAD50-201ENST00000378823 ARHGAP24Q8N264 748 aa12.53□□□□□ -0.4
RAD50-201ENST00000378823 ZBTB21Q9ULJ3 1066 aa12.53□□□□□ -0.4
RAD50-201ENST00000378823 TACC3Q9Y6A5 838 aa12.53□□□□□ -0.4
RAD50-201ENST00000378823 ALDH1L1O75891 902 aa12.53□□□□□ -0.4
RAD50-201ENST00000378823 TSNAXIP1Q2TAA8 658 aa12.53□□□□□ -0.4
RAD50-201ENST00000378823 RAPGEF6Q8TEU7 1601 aa12.53□□□□□ -0.4
RAD50-201ENST00000378823 INPP5BP32019 993 aa12.53□□□□□ -0.4
RAD50-201ENST00000378823 CCDC170Q8IYT3 715 aa12.53□□□□□ -0.4
RAD50-201ENST00000378823 SYNRGQ9UMZ2 1314 aa12.53□□□□□ -0.4
RAD50-201ENST00000378823 HMGXB3Q12766 1538 aa12.53□□□□□ -0.4
RAD50-201ENST00000378823 POLR2DO15514 142 aaKnown RBP12.53□□□□□ -0.4
RAD50-201ENST00000378823 GIGYF1O75420 1035 aaPredicted RBP12.53□□□□□ -0.4
RAD50-201ENST00000378823 NUP58Q9BVL2 599 aa12.53□□□□□ -0.4
RAD50-201ENST00000378823 SBNO2Q9Y2G9 1366 aa12.53□□□□□ -0.4
RAD50-201ENST00000378823 NOX5Q96PH1 765 aa12.53□□□□□ -0.4
RAD50-201ENST00000378823 ADGRF5Q8IZF2 1346 aa12.53□□□□□ -0.4
RAD50-201ENST00000378823 CASQ2O14958 399 aaPredicted RBP12.52□□□□□ -0.4
RAD50-201ENST00000378823 ARHGAP25P42331 645 aa12.52□□□□□ -0.4
RAD50-201ENST00000378823 LMBR1LQ6UX01 489 aa12.52□□□□□ -0.4
RAD50-201ENST00000378823 PHLDB2Q86SQ0 1253 aa12.52□□□□□ -0.4
RAD50-201ENST00000378823 ZKSCAN3Q9BRR0 538 aa12.52□□□□□ -0.4
RAD50-201ENST00000378823 PPP1R12CQ9BZL4 782 aa12.52□□□□□ -0.4
RAD50-201ENST00000378823 PLCB1Q9NQ66 1216 aa12.52□□□□□ -0.4
RAD50-201ENST00000378823 SOS1Q07889 1333 aaPredicted RBP12.52□□□□□ -0.4
RAD50-201ENST00000378823 UNC13AQ9UPW8 1703 aa12.52□□□□□ -0.4
RAD50-201ENST00000378823 CROCCP2Q86T23 111 aa12.52□□□□□ -0.4
RAD50-201ENST00000378823 FAM204AQ9H8W3 233 aa12.52□□□□□ -0.4
RAD50-201ENST00000378823 KIAA0586Q9BVV6 1533 aa12.52□□□□□ -0.41
RAD50-201ENST00000378823 RNF113AO15541 343 aaKnown RBP12.52□□□□□ -0.41
RAD50-201ENST00000378823 PARP1P09874 1014 aaKnown RBP12.52□□□□□ -0.41
RAD50-201ENST00000378823 GOLGA6BA6NDN3 693 aa12.52□□□□□ -0.41
RAD50-201ENST00000378823 ZNF131P52739 623 aa12.52□□□□□ -0.41
RAD50-201ENST00000378823 CALUO43852 315 aaPredicted RBP12.52□□□□□ -0.41
RAD50-201ENST00000378823 KRT9P35527 623 aa12.52□□□□□ -0.41
RAD50-201ENST00000378823 C16orf71Q8IYS4 520 aaPredicted RBP12.52□□□□□ -0.41
RAD50-201ENST00000378823 ACEP12821 1306 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms