RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 SLF2Q8IX21 1173 aa14.21□□□□□ -0.13
DEPDC4-202ENST00000378244 USP40Q9NVE5 1235 aa14.21□□□□□ -0.13
DEPDC4-202ENST00000378244 ZNF70Q9UC06 446 aaPredicted RBP14.21□□□□□ -0.13
DEPDC4-202ENST00000378244 MROH7-TTC4A0A0A0MT08 1334 aa14.21□□□□□ -0.13
DEPDC4-202ENST00000378244 MMP14P50281 582 aa14.21□□□□□ -0.13
DEPDC4-202ENST00000378244 GSTO1P78417 241 aa14.21□□□□□ -0.13
DEPDC4-202ENST00000378244 CDC37L1Q7L3B6 337 aa14.21□□□□□ -0.13
DEPDC4-202ENST00000378244 MRIQ9BWK5 157 aa14.21□□□□□ -0.13
DEPDC4-202ENST00000378244 PGAP2Q9UHJ9 254 aa14.21□□□□□ -0.13
DEPDC4-202ENST00000378244 ITGBL1O95965 494 aaPredicted RBP14.2□□□□□ -0.14
DEPDC4-202ENST00000378244 LDHCP07864 332 aa14.2□□□□□ -0.14
DEPDC4-202ENST00000378244 PDE6AP16499 860 aa14.2□□□□□ -0.14
DEPDC4-202ENST00000378244 RGS3P49796 1198 aa14.2□□□□□ -0.14
DEPDC4-202ENST00000378244 TCP10Q12799 353 aa14.2□□□□□ -0.14
DEPDC4-202ENST00000378244 ERICH6BQ5W0A0 696 aa14.2□□□□□ -0.14
DEPDC4-202ENST00000378244 CDC42EP5Q6NZY7 148 aa14.2□□□□□ -0.14
DEPDC4-202ENST00000378244 RILPL2Q969X0 211 aa14.2□□□□□ -0.14
DEPDC4-202ENST00000378244 ZNF532Q9HCE3 1301 aa14.2□□□□□ -0.14
DEPDC4-202ENST00000378244 SPDYE2Q495Y8 402 aa14.2□□□□□ -0.14
DEPDC4-202ENST00000378244 FSD1Q9BTV5 496 aa14.2□□□□□ -0.14
DEPDC4-202ENST00000378244 DYNLL1P63167 89 aaKnown RBP14.19□□□□□ -0.14
DEPDC4-202ENST00000378244 NFIAQ12857 509 aa14.19□□□□□ -0.14
DEPDC4-202ENST00000378244 PICALMQ13492 652 aa14.19□□□□□ -0.14
DEPDC4-202ENST00000378244 KBTBD3Q8NAB2 608 aa14.19□□□□□ -0.14
DEPDC4-202ENST00000378244 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.19□□□□□ -0.14
DEPDC4-202ENST00000378244 DEFB129Q9H1M3 183 aa14.19□□□□□ -0.14
DEPDC4-202ENST00000378244 TMOD2Q9NZR1 351 aa14.19□□□□□ -0.14
DEPDC4-202ENST00000378244 GAKO14976 1311 aa14.19□□□□□ -0.14
DEPDC4-202ENST00000378244 MYO5AQ9Y4I1 1855 aaKnown RBP14.19□□□□□ -0.14
DEPDC4-202ENST00000378244 C1QTNF8P60827 252 aa14.19□□□□□ -0.14
DEPDC4-202ENST00000378244 RASA3Q14644 834 aa14.19□□□□□ -0.14
DEPDC4-202ENST00000378244 NOL10Q9BSC4 688 aaKnown RBP14.19□□□□□ -0.14
DEPDC4-202ENST00000378244 GPR75-ASB3A0A0A6YYF3 556 aa14.18□□□□□ -0.14
DEPDC4-202ENST00000378244 FSTL1Q12841 308 aa14.18□□□□□ -0.14
DEPDC4-202ENST00000378244 CDAN1Q8IWY9 1227 aa14.18□□□□□ -0.14
DEPDC4-202ENST00000378244 SH3RF3Q8TEJ3 882 aaPredicted RBP14.18□□□□□ -0.14
DEPDC4-202ENST00000378244 FAM163AQ96GL9 167 aaPredicted RBP14.18□□□□□ -0.14
DEPDC4-202ENST00000378244 TMEM39BQ9GZU3 492 aa14.18□□□□□ -0.14
DEPDC4-202ENST00000378244 PRKG1Q13976 671 aa14.18□□□□□ -0.14
DEPDC4-202ENST00000378244 OSBPL3Q9H4L5 887 aa14.18□□□□□ -0.14
DEPDC4-202ENST00000378244 FZD1Q9UP38 647 aa14.18□□□□□ -0.14
DEPDC4-202ENST00000378244 BAG3O95817 575 aa14.17□□□□□ -0.14
DEPDC4-202ENST00000378244 ADD2P35612 726 aa14.17□□□□□ -0.14
DEPDC4-202ENST00000378244 HTRA3P83110 453 aa14.17□□□□□ -0.14
DEPDC4-202ENST00000378244 APOBEC3FQ8IUX4 373 aaKnown RBP14.17□□□□□ -0.14
DEPDC4-202ENST00000378244 POLR2AP24928 1970 aaKnown RBP14.17□□□□□ -0.14
DEPDC4-202ENST00000378244 MYH2Q9UKX2 1941 aa14.17□□□□□ -0.14
DEPDC4-202ENST00000378244 RHBDL3P58872 404 aa14.16□□□□□ -0.14
DEPDC4-202ENST00000378244 PITPNM2Q9BZ72 1349 aa14.16□□□□□ -0.14
DEPDC4-202ENST00000378244 TCRBV5S4A2TA0A5A2 114 aa14.16□□□□□ -0.14
DEPDC4-202ENST00000378244 CELF2O95319 508 aaKnown RBP14.16□□□□□ -0.14
DEPDC4-202ENST00000378244 SLC4A8Q2Y0W8 1093 aa14.16□□□□□ -0.14
DEPDC4-202ENST00000378244 ZFPM1Q8IX07 1006 aa14.16□□□□□ -0.14
DEPDC4-202ENST00000378244 TEX11Q8IYF3 940 aa14.16□□□□□ -0.14
DEPDC4-202ENST00000378244 EVI5LQ96CN4 794 aa14.16□□□□□ -0.14
DEPDC4-202ENST00000378244 CDCA5Q96FF9 252 aa14.16□□□□□ -0.14
DEPDC4-202ENST00000378244 PUS7LQ9H0K6 701 aaKnown RBP14.16□□□□□ -0.14
DEPDC4-202ENST00000378244 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.16□□□□□ -0.14
DEPDC4-202ENST00000378244 WDHD1O75717 1129 aaPredicted RBP14.15□□□□□ -0.14
DEPDC4-202ENST00000378244 GSPT1P15170 499 aaKnown RBP14.15□□□□□ -0.14
DEPDC4-202ENST00000378244 TNFAIP1Q13829 316 aa14.15□□□□□ -0.14
DEPDC4-202ENST00000378244 ZSCAN29Q8IWY8 852 aaPredicted RBP14.15□□□□□ -0.14
DEPDC4-202ENST00000378244 TGFBRAP1Q8WUH2 860 aa14.15□□□□□ -0.14
DEPDC4-202ENST00000378244 SEC62Q99442 399 aaKnown RBP14.15□□□□□ -0.14
DEPDC4-202ENST00000378244 ARMT1Q9H993 441 aa14.15□□□□□ -0.14
DEPDC4-202ENST00000378244 DDX4Q9NQI0 724 aaKnown RBP14.15□□□□□ -0.14
DEPDC4-202ENST00000378244 MAGEB6P1A0A0J9YX57 407 aa14.15□□□□□ -0.14
DEPDC4-202ENST00000378244 TTC22Q5TAA0 569 aa14.15□□□□□ -0.14
DEPDC4-202ENST00000378244 NBPF12Q5TAG4 269 aaPredicted RBP14.15□□□□□ -0.14
DEPDC4-202ENST00000378244 ZSCAN25Q6NSZ9 544 aa14.15□□□□□ -0.14
DEPDC4-202ENST00000378244 MAPKAPK5Q8IW41 473 aa14.15□□□□□ -0.14
DEPDC4-202ENST00000378244 FAM198AQ9UFP1 575 aa14.15□□□□□ -0.14
DEPDC4-202ENST00000378244 RNF113AO15541 343 aaKnown RBP14.14□□□□□ -0.15
DEPDC4-202ENST00000378244 MBD4O95243 580 aa14.14□□□□□ -0.15
DEPDC4-202ENST00000378244 TNNI2P48788 182 aa14.14□□□□□ -0.15
DEPDC4-202ENST00000378244 CST9Q5W186 159 aa14.14□□□□□ -0.15
DEPDC4-202ENST00000378244 LCORLQ8N3X6 602 aa14.14□□□□□ -0.15
DEPDC4-202ENST00000378244 PASKQ96RG2 1323 aa14.14□□□□□ -0.15
DEPDC4-202ENST00000378244 CNTNAP1P78357 1384 aa14.14□□□□□ -0.15
DEPDC4-202ENST00000378244 TTLL12Q14166 644 aaPredicted RBP14.14□□□□□ -0.15
DEPDC4-202ENST00000378244 UBE3CQ15386 1083 aa14.14□□□□□ -0.15
DEPDC4-202ENST00000378244 MOB2Q70IA6 237 aa14.14□□□□□ -0.15
DEPDC4-202ENST00000378244 OSBP2Q969R2 916 aa14.14□□□□□ -0.15
DEPDC4-202ENST00000378244 AIDAQ96BJ3 306 aa14.14□□□□□ -0.15
DEPDC4-202ENST00000378244 RIOK1Q9BRS2 568 aaKnown RBP14.14□□□□□ -0.15
DEPDC4-202ENST00000378244 PRKAB2O43741 272 aa14.13□□□□□ -0.15
DEPDC4-202ENST00000378244 SLURP2P0DP57 97 aa14.13□□□□□ -0.15
DEPDC4-202ENST00000378244 SDSP20132 328 aa14.13□□□□□ -0.15
DEPDC4-202ENST00000378244 PPP4CP60510 307 aa14.13□□□□□ -0.15
DEPDC4-202ENST00000378244 SDR42E1Q8WUS8 393 aa14.13□□□□□ -0.15
DEPDC4-202ENST00000378244 TAOK2Q9UL54 1235 aa14.13□□□□□ -0.15
DEPDC4-202ENST00000378244 PLCG2P16885 1265 aa14.13□□□□□ -0.15
DEPDC4-202ENST00000378244 USP5P45974 858 aa14.13□□□□□ -0.15
DEPDC4-202ENST00000378244 MIGA2Q7L4E1 593 aa14.13□□□□□ -0.15
DEPDC4-202ENST00000378244 SAP30BPQ9UHR5 308 aaKnown RBP14.13□□□□□ -0.15
DEPDC4-202ENST00000378244 LRRFIP1Q32MZ4 808 aaKnown RBP14.12□□□□□ -0.15
DEPDC4-202ENST00000378244 APPBP2Q92624 585 aa14.12□□□□□ -0.15
DEPDC4-202ENST00000378244 FAM227BQ96M60 508 aa14.12□□□□□ -0.15
DEPDC4-202ENST00000378244 IDI2Q9BXS1 227 aa14.12□□□□□ -0.15
DEPDC4-202ENST00000378244 GTF3C3Q9Y5Q9 886 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms