RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 RFC1P35251 1148 aaPredicted RBP6.8□□□□□ -1.32
VPS13B-203ENST00000358544 NLRP5P59047 1200 aa6.8□□□□□ -1.32
VPS13B-203ENST00000358544 SRGAP1Q7Z6B7 1085 aa6.8□□□□□ -1.32
VPS13B-203ENST00000358544 ATP8B2P98198 1209 aa6.8□□□□□ -1.32
VPS13B-203ENST00000358544 TSC22D3Q99576 134 aa6.8□□□□□ -1.32
VPS13B-203ENST00000358544 FAM169AQ9Y6X4 670 aa6.8□□□□□ -1.32
VPS13B-203ENST00000358544 ALG1Q9BT22 464 aa6.8□□□□□ -1.32
VPS13B-203ENST00000358544 ABCC5O15440 1437 aa6.8□□□□□ -1.32
VPS13B-203ENST00000358544 HMGB1P1B2RPK0 211 aaPredicted RBP6.8□□□□□ -1.32
VPS13B-203ENST00000358544 CD2BP2O95400 341 aaKnown RBP6.8□□□□□ -1.32
VPS13B-203ENST00000358544 BICC1Q9H694 974 aaKnown RBP6.8□□□□□ -1.32
VPS13B-203ENST00000358544 IARSP41252 1262 aaKnown RBP6.8□□□□□ -1.32
VPS13B-203ENST00000358544 GUCY2FP51841 1108 aa6.8□□□□□ -1.32
VPS13B-203ENST00000358544 CCDC110Q8TBZ0 833 aa6.8□□□□□ -1.32
VPS13B-203ENST00000358544 IQCGQ9H095 443 aaKnown RBP6.8□□□□□ -1.32
VPS13B-203ENST00000358544 TSPYL2Q9H2G4 693 aaPredicted RBP6.8□□□□□ -1.32
VPS13B-203ENST00000358544 RNF41Q9H4P4 317 aaPredicted RBP6.8□□□□□ -1.32
VPS13B-203ENST00000358544 ST7Q9NRC1 585 aa6.8□□□□□ -1.32
VPS13B-203ENST00000358544 CTDP1Q9Y5B0 961 aaPredicted RBP6.8□□□□□ -1.32
VPS13B-203ENST00000358544 RGS12O14924 1447 aa6.8□□□□□ -1.32
VPS13B-203ENST00000358544 RGS16O15492 202 aaPredicted RBP6.8□□□□□ -1.32
VPS13B-203ENST00000358544 CCT6AP40227 531 aaKnown RBP6.8□□□□□ -1.32
VPS13B-203ENST00000358544 TMEM87AQ8NBN3 555 aa6.8□□□□□ -1.32
VPS13B-203ENST00000358544 SAR1BQ9Y6B6 198 aa6.8□□□□□ -1.32
VPS13B-203ENST00000358544 WNK2Q9Y3S1 2297 aa6.8□□□□□ -1.32
VPS13B-203ENST00000358544 VSIG1Q86XK7 387 aa6.8□□□□□ -1.32
VPS13B-203ENST00000358544 DZIP1Q86YF9 867 aaKnown RBP6.8□□□□□ -1.32
VPS13B-203ENST00000358544 TCHPQ9BT92 498 aa6.8□□□□□ -1.32
VPS13B-203ENST00000358544 PLCB1Q9NQ66 1216 aa6.8□□□□□ -1.32
VPS13B-203ENST00000358544 NOP53Q9NZM5 478 aaKnown RBP6.8□□□□□ -1.32
VPS13B-203ENST00000358544 SEC63Q9UGP8 760 aaKnown RBP6.8□□□□□ -1.32
VPS13B-203ENST00000358544 PSME1Q06323 249 aa6.8□□□□□ -1.32
VPS13B-203ENST00000358544 DYNC1I2Q13409 638 aaKnown RBP6.8□□□□□ -1.32
VPS13B-203ENST00000358544 TRIM6Q9C030 488 aaPredicted RBP6.8□□□□□ -1.32
VPS13B-203ENST00000358544 KCNH3Q9ULD8 1083 aa6.8□□□□□ -1.32
VPS13B-203ENST00000358544 HGSO14964 777 aaPredicted RBP6.8□□□□□ -1.32
VPS13B-203ENST00000358544 LRRC8AQ8IWT6 810 aa6.8□□□□□ -1.32
VPS13B-203ENST00000358544 ARHGEF2Q92974 986 aaKnown RBP6.8□□□□□ -1.32
VPS13B-203ENST00000358544 DMRT2Q9Y5R5 561 aa6.8□□□□□ -1.32
VPS13B-203ENST00000358544 NBPF7P0C2Y1 421 aaPredicted RBP6.79□□□□□ -1.32
VPS13B-203ENST00000358544 APOBRQ0VD83 1088 aa6.79□□□□□ -1.32
VPS13B-203ENST00000358544 RRS1Q15050 365 aaKnown RBP6.79□□□□□ -1.32
VPS13B-203ENST00000358544 FBXO41Q8TF61 875 aa6.79□□□□□ -1.32
VPS13B-203ENST00000358544 MRFAP1Q9Y605 127 aa6.79□□□□□ -1.32
VPS13B-203ENST00000358544 PDS5BQ9NTI5 1447 aa6.79□□□□□ -1.32
VPS13B-203ENST00000358544 TAF7Q15545 349 aaPredicted RBP6.79□□□□□ -1.32
VPS13B-203ENST00000358544 SPINK5Q9NQ38 1064 aaPredicted RBP6.79□□□□□ -1.32
VPS13B-203ENST00000358544 AKAP2Q9Y2D5 859 aa6.79□□□□□ -1.32
VPS13B-203ENST00000358544 PDE1CQ14123 709 aaPredicted RBP6.79□□□□□ -1.32
VPS13B-203ENST00000358544 ADAM21Q9UKJ8 722 aa6.79□□□□□ -1.32
VPS13B-203ENST00000358544 SOS1Q07889 1333 aaPredicted RBP6.79□□□□□ -1.32
VPS13B-203ENST00000358544 NUP214P35658 2090 aaPredicted RBP6.79□□□□□ -1.32
VPS13B-203ENST00000358544 A0A1B0GVL5 298 aa6.79□□□□□ -1.32
VPS13B-203ENST00000358544 AMPD3Q01432 767 aa6.79□□□□□ -1.32
VPS13B-203ENST00000358544 PPARDQ03181 441 aa6.79□□□□□ -1.32
VPS13B-203ENST00000358544 TMEM266Q2M3C6 531 aa6.79□□□□□ -1.32
VPS13B-203ENST00000358544 CCDC63Q8NA47 563 aa6.79□□□□□ -1.32
VPS13B-203ENST00000358544 KLHL14Q9P2G3 628 aa6.79□□□□□ -1.32
VPS13B-203ENST00000358544 RANBP1P43487 201 aa6.79□□□□□ -1.32
VPS13B-203ENST00000358544 ACTN3Q08043 901 aaPredicted RBP6.79□□□□□ -1.32
VPS13B-203ENST00000358544 SRLQ86TD4 932 aa6.79□□□□□ -1.32
VPS13B-203ENST00000358544 CCDC25Q86WR0 208 aa6.79□□□□□ -1.32
VPS13B-203ENST00000358544 KLHL7Q8IXQ5 586 aa6.79□□□□□ -1.32
VPS13B-203ENST00000358544 TMEM51Q9NW97 253 aa6.79□□□□□ -1.32
VPS13B-203ENST00000358544 ZRANB1Q9UGI0 708 aa6.79□□□□□ -1.32
VPS13B-203ENST00000358544 CHUKO15111 745 aa6.79□□□□□ -1.32
VPS13B-203ENST00000358544 ZBTB17Q13105 803 aa6.79□□□□□ -1.32
VPS13B-203ENST00000358544 NNTQ13423 1086 aa6.79□□□□□ -1.32
VPS13B-203ENST00000358544 TAF11Q15544 211 aa6.79□□□□□ -1.32
VPS13B-203ENST00000358544 MUM1L1Q5H9M0 696 aa6.79□□□□□ -1.32
VPS13B-203ENST00000358544 SEL1L2Q5TEA6 688 aa6.79□□□□□ -1.32
VPS13B-203ENST00000358544 NAA16Q6N069 864 aaPredicted RBP6.79□□□□□ -1.32
VPS13B-203ENST00000358544 PPANQ9NQ55 473 aaKnown RBP6.79□□□□□ -1.32
VPS13B-203ENST00000358544 MTMR6Q9Y217 621 aa6.79□□□□□ -1.32
VPS13B-203ENST00000358544 IFIT3O14879 490 aaKnown RBP6.79□□□□□ -1.32
VPS13B-203ENST00000358544 CUTAO60888 179 aa6.79□□□□□ -1.32
VPS13B-203ENST00000358544 MEIS3Q99687 375 aa6.79□□□□□ -1.32
VPS13B-203ENST00000358544 HOMER2Q9NSB8 354 aa6.79□□□□□ -1.32
VPS13B-203ENST00000358544 IDH1O75874 414 aaKnown RBP6.79□□□□□ -1.32
VPS13B-203ENST00000358544 MLKLQ8NB16 471 aa6.79□□□□□ -1.32
VPS13B-203ENST00000358544 TBC1D5Q92609 795 aa6.79□□□□□ -1.32
VPS13B-203ENST00000358544 CFAP65Q6ZU64 1925 aaKnown RBP6.79□□□□□ -1.32
VPS13B-203ENST00000358544 RAD54L2Q9Y4B4 1467 aa6.79□□□□□ -1.32
VPS13B-203ENST00000358544 TROQ12816 1431 aaPredicted RBP6.79□□□□□ -1.32
VPS13B-203ENST00000358544 COG7P83436 770 aa6.79□□□□□ -1.32
VPS13B-203ENST00000358544 CCDC92Q53HC0 331 aaPredicted RBP6.79□□□□□ -1.32
VPS13B-203ENST00000358544 CCHCR1Q8TD31 782 aa6.79□□□□□ -1.32
VPS13B-203ENST00000358544 PCF11O94913 1555 aaKnown RBP6.79□□□□□ -1.32
VPS13B-203ENST00000358544 GAPVD1Q14C86 1478 aa6.79□□□□□ -1.32
VPS13B-203ENST00000358544 GNPTABQ3T906 1256 aa6.79□□□□□ -1.32
VPS13B-203ENST00000358544 TMEM67Q5HYA8 995 aa6.79□□□□□ -1.32
VPS13B-203ENST00000358544 FERP16591 822 aa6.79□□□□□ -1.32
VPS13B-203ENST00000358544 ELF1P32519 619 aa6.79□□□□□ -1.32
VPS13B-203ENST00000358544 UBA7P41226 1012 aa6.79□□□□□ -1.32
VPS13B-203ENST00000358544 MYO1EQ12965 1108 aa6.79□□□□□ -1.32
VPS13B-203ENST00000358544 RTN1Q16799 776 aa6.79□□□□□ -1.32
VPS13B-203ENST00000358544 DENND2CQ68D51 928 aa6.79□□□□□ -1.32
VPS13B-203ENST00000358544 TTC19Q6DKK2 380 aaPredicted RBP6.79□□□□□ -1.32
VPS13B-203ENST00000358544 CCDC82Q8N4S0 544 aa6.79□□□□□ -1.32
VPS13B-203ENST00000358544 CALR3Q96L12 384 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms