RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 USHBP1Q8N6Y0 703 aa14.23□□□□□ -0.13
SYNCRIP-201ENST00000355238 TXNDC16Q9P2K2 825 aa14.23□□□□□ -0.13
SYNCRIP-201ENST00000355238 RRP15Q9Y3B9 282 aaKnown RBP14.23□□□□□ -0.13
SYNCRIP-201ENST00000355238 ZNF131P52739 623 aa14.23□□□□□ -0.13
SYNCRIP-201ENST00000355238 ZC3H6P61129 1189 aaKnown RBP14.23□□□□□ -0.13
SYNCRIP-201ENST00000355238 MAP7Q14244 749 aa14.23□□□□□ -0.13
SYNCRIP-201ENST00000355238 ZNF365Q70YC5 407 aa14.23□□□□□ -0.13
SYNCRIP-201ENST00000355238 SLC4A4Q9Y6R1 1079 aa14.23□□□□□ -0.13
SYNCRIP-201ENST00000355238 ZNF202O95125 648 aa14.23□□□□□ -0.13
SYNCRIP-201ENST00000355238 GNAT2P19087 354 aa14.23□□□□□ -0.13
SYNCRIP-201ENST00000355238 RBBP5Q15291 538 aaKnown RBP14.23□□□□□ -0.13
SYNCRIP-201ENST00000355238 MRFAP1L1Q96HT8 127 aa14.23□□□□□ -0.13
SYNCRIP-201ENST00000355238 TRAF1Q13077 416 aa14.23□□□□□ -0.13
SYNCRIP-201ENST00000355238 ANKRD13DQ6ZTN6 518 aa14.23□□□□□ -0.13
SYNCRIP-201ENST00000355238 SPATS2LQ9NUQ6 558 aaKnown RBP14.23□□□□□ -0.13
SYNCRIP-201ENST00000355238 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.23□□□□□ -0.13
SYNCRIP-201ENST00000355238 ZMYM4Q5VZL5 1548 aa14.23□□□□□ -0.13
SYNCRIP-201ENST00000355238 LIG3P49916 1009 aa14.22□□□□□ -0.13
SYNCRIP-201ENST00000355238 HS2ST1Q7LGA3 356 aa14.22□□□□□ -0.13
SYNCRIP-201ENST00000355238 BCAS4Q8TDM0 211 aa14.22□□□□□ -0.13
SYNCRIP-201ENST00000355238 IQCDQ96DY2 449 aa14.22□□□□□ -0.13
SYNCRIP-201ENST00000355238 RIPOR2Q9Y4F9 1068 aa14.22□□□□□ -0.13
SYNCRIP-201ENST00000355238 SAR1BQ9Y6B6 198 aa14.22□□□□□ -0.13
SYNCRIP-201ENST00000355238 HIP1RO75146 1068 aa14.22□□□□□ -0.13
SYNCRIP-201ENST00000355238 RPL13P26373 211 aaKnown RBP14.22□□□□□ -0.13
SYNCRIP-201ENST00000355238 KRT9P35527 623 aa14.22□□□□□ -0.13
SYNCRIP-201ENST00000355238 MTX1Q13505 466 aa14.22□□□□□ -0.13
SYNCRIP-201ENST00000355238 SNCBQ16143 134 aa14.22□□□□□ -0.13
SYNCRIP-201ENST00000355238 NAA16Q6N069 864 aaPredicted RBP14.22□□□□□ -0.13
SYNCRIP-201ENST00000355238 CDC5LQ99459 802 aaKnown RBP14.22□□□□□ -0.13
SYNCRIP-201ENST00000355238 INSRP06213 1382 aa14.22□□□□□ -0.13
SYNCRIP-201ENST00000355238 PLCD1P51178 756 aa14.22□□□□□ -0.13
SYNCRIP-201ENST00000355238 XPO4Q9C0E2 1151 aaKnown RBP14.22□□□□□ -0.13
SYNCRIP-201ENST00000355238 NFE2L3Q9Y4A8 694 aa14.22□□□□□ -0.13
SYNCRIP-201ENST00000355238 NAPAP54920 295 aa14.22□□□□□ -0.13
SYNCRIP-201ENST00000355238 PAK1Q13153 545 aa14.22□□□□□ -0.13
SYNCRIP-201ENST00000355238 LRRC8AQ8IWT6 810 aa14.22□□□□□ -0.13
SYNCRIP-201ENST00000355238 VEZTQ9HBM0 779 aa14.22□□□□□ -0.13
SYNCRIP-201ENST00000355238 WWC3Q9ULE0 1092 aa14.22□□□□□ -0.13
SYNCRIP-201ENST00000355238 KSR2Q6VAB6 950 aa14.22□□□□□ -0.13
SYNCRIP-201ENST00000355238 PSDA5PKW4 1024 aaPredicted RBP14.21□□□□□ -0.13
SYNCRIP-201ENST00000355238 ATP5J2-PTCD1G3V325 749 aa14.21□□□□□ -0.13
SYNCRIP-201ENST00000355238 HELLSQ9NRZ9 838 aa14.21□□□□□ -0.13
SYNCRIP-201ENST00000355238 CHPF2Q9P2E5 772 aa14.21□□□□□ -0.13
SYNCRIP-201ENST00000355238 RNF40O75150 1001 aa14.21□□□□□ -0.13
SYNCRIP-201ENST00000355238 GJC1P36383 396 aa14.21□□□□□ -0.13
SYNCRIP-201ENST00000355238 C14orf93Q9H972 538 aaKnown RBP14.21□□□□□ -0.13
SYNCRIP-201ENST00000355238 MCM7P33993 719 aa14.21□□□□□ -0.13
SYNCRIP-201ENST00000355238 VPS52Q8N1B4 723 aa14.21□□□□□ -0.13
SYNCRIP-201ENST00000355238 TEX13AQ9BXU3 409 aaPredicted RBP14.21□□□□□ -0.13
SYNCRIP-201ENST00000355238 ANKIB1Q9P2G1 1089 aa14.21□□□□□ -0.13
SYNCRIP-201ENST00000355238 STX8Q9UNK0 236 aa14.21□□□□□ -0.13
SYNCRIP-201ENST00000355238 UBL4BQ8N7F7 174 aa14.21□□□□□ -0.13
SYNCRIP-201ENST00000355238 PABPN1LA6NDY0 278 aaKnown RBP14.21□□□□□ -0.14
SYNCRIP-201ENST00000355238 SLC27A2O14975 620 aa14.21□□□□□ -0.14
SYNCRIP-201ENST00000355238 APBA1Q02410 837 aa14.21□□□□□ -0.14
SYNCRIP-201ENST00000355238 RAPGEF1Q13905 1077 aa14.21□□□□□ -0.14
SYNCRIP-201ENST00000355238 ATP2B3Q16720 1220 aa14.21□□□□□ -0.14
SYNCRIP-201ENST00000355238 INF2Q27J81 1249 aa14.21□□□□□ -0.14
SYNCRIP-201ENST00000355238 PHLDB3Q6NSJ2 640 aa14.21□□□□□ -0.14
SYNCRIP-201ENST00000355238 RABGGTAQ92696 567 aa14.21□□□□□ -0.14
SYNCRIP-201ENST00000355238 ZBTB3Q9H5J0 574 aa14.21□□□□□ -0.14
SYNCRIP-201ENST00000355238 RABGAP1Q9Y3P9 1069 aa14.21□□□□□ -0.14
SYNCRIP-201ENST00000355238 TSPY3P0CV98 308 aa14.2□□□□□ -0.14
SYNCRIP-201ENST00000355238 TSPY8P0CW00 308 aa14.2□□□□□ -0.14
SYNCRIP-201ENST00000355238 MUM1Q2TAK8 710 aa14.2□□□□□ -0.14
SYNCRIP-201ENST00000355238 KRT71Q3SY84 523 aa14.2□□□□□ -0.14
SYNCRIP-201ENST00000355238 SLC9C1Q4G0N8 1177 aa14.2□□□□□ -0.14
SYNCRIP-201ENST00000355238 SLC9C2Q5TAH2 1124 aa14.2□□□□□ -0.14
SYNCRIP-201ENST00000355238 PPANQ9NQ55 473 aaKnown RBP14.2□□□□□ -0.14
SYNCRIP-201ENST00000355238 SAMM50Q9Y512 469 aa14.2□□□□□ -0.14
SYNCRIP-201ENST00000355238 CCDC14Q49A88 953 aa14.2□□□□□ -0.14
SYNCRIP-201ENST00000355238 CNNM4Q6P4Q7 775 aa14.2□□□□□ -0.14
SYNCRIP-201ENST00000355238 RFC1P35251 1148 aaPredicted RBP14.2□□□□□ -0.14
SYNCRIP-201ENST00000355238 CHST3Q7LGC8 479 aa14.2□□□□□ -0.14
SYNCRIP-201ENST00000355238 FCHSD1Q86WN1 690 aa14.2□□□□□ -0.14
SYNCRIP-201ENST00000355238 GBP7Q8N8V2 638 aaPredicted RBP14.2□□□□□ -0.14
SYNCRIP-201ENST00000355238 SNRPA1P09661 255 aaKnown RBP14.2□□□□□ -0.14
SYNCRIP-201ENST00000355238 CPA1P15085 419 aa14.2□□□□□ -0.14
SYNCRIP-201ENST00000355238 ERCC5P28715 1186 aaPredicted RBP14.2□□□□□ -0.14
SYNCRIP-201ENST00000355238 TBC1D31Q96DN5 1066 aa14.2□□□□□ -0.14
SYNCRIP-201ENST00000355238 IBTKQ9P2D0 1353 aaPredicted RBP14.2□□□□□ -0.14
SYNCRIP-201ENST00000355238 MAGEA1P43355 309 aa14.2□□□□□ -0.14
SYNCRIP-201ENST00000355238 IMPG2Q9BZV3 1241 aa14.2□□□□□ -0.14
SYNCRIP-201ENST00000355238 IRX4P78413 519 aa14.19□□□□□ -0.14
SYNCRIP-201ENST00000355238 GSTO1P78417 241 aa14.19□□□□□ -0.14
SYNCRIP-201ENST00000355238 ASIC2Q16515 512 aa14.19□□□□□ -0.14
SYNCRIP-201ENST00000355238 SEPT14Q6ZU15 432 aa14.19□□□□□ -0.14
SYNCRIP-201ENST00000355238 SV2BQ7L1I2 683 aa14.19□□□□□ -0.14
SYNCRIP-201ENST00000355238 GAS2L3Q86XJ1 694 aa14.19□□□□□ -0.14
SYNCRIP-201ENST00000355238 SSX2IPQ9Y2D8 614 aa14.19□□□□□ -0.14
SYNCRIP-201ENST00000355238 MAGI1Q96QZ7 1491 aaPredicted RBP14.19□□□□□ -0.14
SYNCRIP-201ENST00000355238 SYCE1Q8N0S2 351 aa14.19□□□□□ -0.14
SYNCRIP-201ENST00000355238 PARP2Q9UGN5 583 aa14.19□□□□□ -0.14
SYNCRIP-201ENST00000355238 VWA3AA6NCI4 1184 aa14.19□□□□□ -0.14
SYNCRIP-201ENST00000355238 SGSM2O43147 1006 aa14.19□□□□□ -0.14
SYNCRIP-201ENST00000355238 CYP7A1P22680 504 aa14.19□□□□□ -0.14
SYNCRIP-201ENST00000355238 CDC25BP30305 580 aa14.19□□□□□ -0.14
SYNCRIP-201ENST00000355238 HHATQ5VTY9 493 aa14.19□□□□□ -0.14
SYNCRIP-201ENST00000355238 SLF1Q9BQI6 1058 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms