RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 G3BP2Q9UN86 482 aaKnown RBP3.6□□□□□ -1.83
HERC4-201ENST00000277817 PSME4Q14997 1843 aa3.6□□□□□ -1.83
HERC4-201ENST00000277817 SMG6Q86US8 1419 aaKnown RBP3.6□□□□□ -1.83
HERC4-201ENST00000277817 PXDNLA1KZ92 1463 aa3.6□□□□□ -1.83
HERC4-201ENST00000277817 BHMG1C9JSJ3 638 aaPredicted RBP3.6□□□□□ -1.83
HERC4-201ENST00000277817 CDC45O75419 566 aa3.6□□□□□ -1.83
HERC4-201ENST00000277817 CLCN6P51797 869 aa3.6□□□□□ -1.83
HERC4-201ENST00000277817 WNT7BP56706 349 aa3.6□□□□□ -1.83
HERC4-201ENST00000277817 BIRC2Q13490 618 aa3.6□□□□□ -1.83
HERC4-201ENST00000277817 MSS51Q4VC12 460 aa3.6□□□□□ -1.83
HERC4-201ENST00000277817 C16orf86Q6ZW13 317 aa3.6□□□□□ -1.83
HERC4-201ENST00000277817 NKAIN3Q8N8D7 197 aa3.6□□□□□ -1.83
HERC4-201ENST00000277817 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.6□□□□□ -1.83
HERC4-201ENST00000277817 PRKAG3Q9UGI9 489 aa3.6□□□□□ -1.83
HERC4-201ENST00000277817 LTBP1Q14766 1721 aa3.6□□□□□ -1.83
HERC4-201ENST00000277817 ROCK2O75116 1388 aaKnown RBP3.6□□□□□ -1.83
HERC4-201ENST00000277817 LRRC37AA6NMS7 1700 aa3.6□□□□□ -1.83
HERC4-201ENST00000277817 K7ESF4 209 aa3.6□□□□□ -1.83
HERC4-201ENST00000277817 NDUFB5O43674 189 aa3.6□□□□□ -1.83
HERC4-201ENST00000277817 HS2ST1Q7LGA3 356 aa3.6□□□□□ -1.83
HERC4-201ENST00000277817 MORC1Q86VD1 984 aa3.6□□□□□ -1.83
HERC4-201ENST00000277817 SLITRK4Q8IW52 837 aa3.6□□□□□ -1.83
HERC4-201ENST00000277817 SNRNP27Q8WVK2 155 aaKnown RBP3.6□□□□□ -1.83
HERC4-201ENST00000277817 APPBP2Q92624 585 aa3.6□□□□□ -1.83
HERC4-201ENST00000277817 ZBED2Q9BTP6 218 aa3.6□□□□□ -1.83
HERC4-201ENST00000277817 INO80BQ9C086 356 aaPredicted RBP3.6□□□□□ -1.83
HERC4-201ENST00000277817 TCF7L1Q9HCS4 588 aa3.6□□□□□ -1.83
HERC4-201ENST00000277817 NUDCQ9Y266 331 aa3.6□□□□□ -1.83
HERC4-201ENST00000277817 ATP8A1Q9Y2Q0 1164 aa3.6□□□□□ -1.83
HERC4-201ENST00000277817 MAPK8IP3Q9UPT6 1336 aa3.6□□□□□ -1.83
HERC4-201ENST00000277817 POLR3AO14802 1390 aaPredicted RBP3.6□□□□□ -1.83
HERC4-201ENST00000277817 ADCY9O60503 1353 aa3.6□□□□□ -1.83
HERC4-201ENST00000277817 SBF1O95248 1867 aa3.6□□□□□ -1.83
HERC4-201ENST00000277817 FZD9O00144 591 aa3.6□□□□□ -1.83
HERC4-201ENST00000277817 VEGFBP49765 207 aa3.6□□□□□ -1.83
HERC4-201ENST00000277817 AKAP4Q5JQC9 854 aa3.6□□□□□ -1.83
HERC4-201ENST00000277817 MUC3BQ9H195 1237 aa3.6□□□□□ -1.83
HERC4-201ENST00000277817 PRKRIP1Q9H875 184 aaPredicted RBP3.6□□□□□ -1.83
HERC4-201ENST00000277817 MAP3K20Q9NYL2 800 aaKnown RBP3.6□□□□□ -1.83
HERC4-201ENST00000277817 STIM2Q9P246 746 aa3.6□□□□□ -1.83
HERC4-201ENST00000277817 STK26Q9P289 416 aa3.6□□□□□ -1.83
HERC4-201ENST00000277817 VTI1BQ9UEU0 232 aa3.6□□□□□ -1.83
HERC4-201ENST00000277817 CD2APQ9Y5K6 639 aa3.6□□□□□ -1.83
HERC4-201ENST00000277817 SSC5DA1L4H1 1573 aa3.6□□□□□ -1.83
HERC4-201ENST00000277817 KTN1Q86UP2 1357 aaKnown RBP3.59□□□□□ -1.83
HERC4-201ENST00000277817 PNMA6FA0A0J9YX94 578 aa3.59□□□□□ -1.83
HERC4-201ENST00000277817 JUNDP17535 347 aa3.59□□□□□ -1.83
HERC4-201ENST00000277817 MAN1A1P33908 653 aa3.59□□□□□ -1.83
HERC4-201ENST00000277817 C16orf46Q6P387 395 aa3.59□□□□□ -1.83
HERC4-201ENST00000277817 IFNL3Q8IZI9 196 aa3.59□□□□□ -1.83
HERC4-201ENST00000277817 TRMT2BQ96GJ1 504 aaKnown RBP3.59□□□□□ -1.83
HERC4-201ENST00000277817 ARHGEF10LQ9HCE6 1279 aa3.59□□□□□ -1.83
HERC4-201ENST00000277817 ZSWIM6Q9HCJ5 1215 aa3.59□□□□□ -1.83
HERC4-201ENST00000277817 BLMP54132 1417 aaPredicted RBP3.59□□□□□ -1.83
HERC4-201ENST00000277817 LAMB2P55268 1798 aa3.59□□□□□ -1.83
HERC4-201ENST00000277817 SCN7AQ01118 1682 aa3.59□□□□□ -1.83
HERC4-201ENST00000277817 CPDO75976 1380 aa3.59□□□□□ -1.83
HERC4-201ENST00000277817 ANKRD30AQ9BXX3 1397 aa3.59□□□□□ -1.83
HERC4-201ENST00000277817 PDGFAP04085 211 aa3.59□□□□□ -1.83
HERC4-201ENST00000277817 PTK2Q05397 1052 aa3.59□□□□□ -1.83
HERC4-201ENST00000277817 NFX1Q12986 1120 aaKnown RBP3.59□□□□□ -1.83
HERC4-201ENST00000277817 GRIN2CQ14957 1233 aa3.59□□□□□ -1.83
HERC4-201ENST00000277817 ERICH6BQ5W0A0 696 aa3.59□□□□□ -1.83
HERC4-201ENST00000277817 PCNX4Q63HM2 1172 aa3.59□□□□□ -1.83
HERC4-201ENST00000277817 IGF2-ASQ6U949 168 aa3.59□□□□□ -1.83
HERC4-201ENST00000277817 RTFDC1Q9BY42 306 aaPredicted RBP3.59□□□□□ -1.83
HERC4-201ENST00000277817 FBXO9Q9UK97 447 aaPredicted RBP3.59□□□□□ -1.83
HERC4-201ENST00000277817 PNMA3Q9UL41 463 aa3.59□□□□□ -1.83
HERC4-201ENST00000277817 SLC27A5Q9Y2P5 690 aa3.59□□□□□ -1.83
HERC4-201ENST00000277817 LEMD3Q9Y2U8 911 aa3.59□□□□□ -1.83
HERC4-201ENST00000277817 ZNF644Q9H582 1327 aaPredicted RBP3.59□□□□□ -1.83
HERC4-201ENST00000277817 ABCC11Q96J66 1382 aa3.59□□□□□ -1.83
HERC4-201ENST00000277817 DEKP35659 375 aaKnown RBP3.59□□□□□ -1.84
HERC4-201ENST00000277817 GIPRP48546 466 aa3.59□□□□□ -1.84
HERC4-201ENST00000277817 TAF1CQ15572 869 aaPredicted RBP3.59□□□□□ -1.84
HERC4-201ENST00000277817 ANKS3Q6ZW76 656 aa3.59□□□□□ -1.84
HERC4-201ENST00000277817 CDH19Q9H159 772 aa3.59□□□□□ -1.84
HERC4-201ENST00000277817 PHF20L1A8MW92 1017 aa3.58□□□□□ -1.84
HERC4-201ENST00000277817 ACTN4O43707 911 aaKnown RBP3.58□□□□□ -1.84
HERC4-201ENST00000277817 MLECQ14165 292 aa3.58□□□□□ -1.84
HERC4-201ENST00000277817 CKAP2LQ8IYA6 745 aa3.58□□□□□ -1.84
HERC4-201ENST00000277817 PLCD4Q9BRC7 762 aa3.58□□□□□ -1.84
HERC4-201ENST00000277817 DOT1LQ8TEK3 1739 aa3.58□□□□□ -1.84
HERC4-201ENST00000277817 SPAG9O60271 1321 aaKnown RBP3.58□□□□□ -1.84
HERC4-201ENST00000277817 KDM3BQ7LBC6 1761 aa3.58□□□□□ -1.84
HERC4-201ENST00000277817 LDHAP00338 332 aaKnown RBP3.58□□□□□ -1.84
HERC4-201ENST00000277817 POU3F2P20265 443 aaPredicted RBP3.58□□□□□ -1.84
HERC4-201ENST00000277817 ERVK-9P63128 1117 aa3.58□□□□□ -1.84
HERC4-201ENST00000277817 LRRC41Q15345 812 aa3.58□□□□□ -1.84
HERC4-201ENST00000277817 SWT1Q5T5J6 900 aaKnown RBP3.58□□□□□ -1.84
HERC4-201ENST00000277817 BLOC1S3Q6QNY0 202 aa3.58□□□□□ -1.84
HERC4-201ENST00000277817 RNF19BQ6ZMZ0 732 aa3.58□□□□□ -1.84
HERC4-201ENST00000277817 ETFBKMTQ8IXQ9 262 aa3.58□□□□□ -1.84
HERC4-201ENST00000277817 SPICE1Q8N0Z3 855 aa3.58□□□□□ -1.84
HERC4-201ENST00000277817 FAM169BQ8N8A8 192 aa3.58□□□□□ -1.84
HERC4-201ENST00000277817 ADAM32Q8TC27 787 aa3.58□□□□□ -1.84
HERC4-201ENST00000277817 DNAJC7Q99615 494 aa3.58□□□□□ -1.84
HERC4-201ENST00000277817 KCNG1Q9UIX4 513 aa3.58□□□□□ -1.84
HERC4-201ENST00000277817 DOLKQ9UPQ8 538 aa3.58□□□□□ -1.84
HERC4-201ENST00000277817 BPNT1O95861 308 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms