RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 IDH1O75874 414 aaKnown RBP20.37■□□□□ 0.85
SDCBP-201ENST00000260130 TNNI2P48788 182 aa20.37■□□□□ 0.85
SDCBP-201ENST00000260130 CACNB3P54284 484 aa20.37■□□□□ 0.85
SDCBP-201ENST00000260130 NAA16Q6N069 864 aaPredicted RBP20.37■□□□□ 0.85
SDCBP-201ENST00000260130 USP40Q9NVE5 1235 aa20.37■□□□□ 0.85
SDCBP-201ENST00000260130 ABT1Q9ULW3 272 aaKnown RBP20.37■□□□□ 0.85
SDCBP-201ENST00000260130 GPR75-ASB3A0A0A6YYF3 556 aa20.36■□□□□ 0.85
SDCBP-201ENST00000260130 FKBP1CQ5VVH2 108 aa20.36■□□□□ 0.85
SDCBP-201ENST00000260130 HAUS7Q99871 368 aa20.36■□□□□ 0.85
SDCBP-201ENST00000260130 GBA2Q9HCG7 927 aaPredicted RBP20.36■□□□□ 0.85
SDCBP-201ENST00000260130 GOLIM4O00461 696 aa20.36■□□□□ 0.85
SDCBP-201ENST00000260130 BTDP43251 543 aa20.36■□□□□ 0.85
SDCBP-201ENST00000260130 MAP3K12Q12852 859 aa20.36■□□□□ 0.85
SDCBP-201ENST00000260130 C2orf69Q8N8R5 385 aa20.36■□□□□ 0.85
SDCBP-201ENST00000260130 ECM29Q5VYK3 1845 aa20.36■□□□□ 0.85
SDCBP-201ENST00000260130 NF2P35240 595 aa20.35■□□□□ 0.85
SDCBP-201ENST00000260130 DNAJC5GQ8N7S2 189 aa20.35■□□□□ 0.85
SDCBP-201ENST00000260130 PAG1Q9NWQ8 432 aa20.35■□□□□ 0.85
SDCBP-201ENST00000260130 TLL2Q9Y6L7 1015 aa20.35■□□□□ 0.85
SDCBP-201ENST00000260130 SAPCD2Q86UD0 394 aa20.35■□□□□ 0.85
SDCBP-201ENST00000260130 OTUD7AQ8TE49 926 aaPredicted RBP20.35■□□□□ 0.85
SDCBP-201ENST00000260130 TRPM7Q96QT4 1865 aa20.35■□□□□ 0.85
SDCBP-201ENST00000260130 FAM83AQ86UY5 434 aa20.34■□□□□ 0.85
SDCBP-201ENST00000260130 EDC3Q96F86 508 aaKnown RBP20.34■□□□□ 0.85
SDCBP-201ENST00000260130 TTC41PQ6P2S7 1318 aa20.34■□□□□ 0.85
SDCBP-201ENST00000260130 SUPT20HL1Q3ZLR7 823 aa20.34■□□□□ 0.85
SDCBP-201ENST00000260130 TSHZ3Q63HK5 1081 aa20.34■□□□□ 0.85
SDCBP-201ENST00000260130 RASSF10A6NK89 507 aa20.33■□□□□ 0.85
SDCBP-201ENST00000260130 FKBP1BP68106 108 aa20.33■□□□□ 0.85
SDCBP-201ENST00000260130 CNTNAP1P78357 1384 aa20.33■□□□□ 0.85
SDCBP-201ENST00000260130 DEFB115Q30KQ5 88 aa20.33■□□□□ 0.85
SDCBP-201ENST00000260130 TMED8Q6PL24 325 aaPredicted RBP20.33■□□□□ 0.85
SDCBP-201ENST00000260130 MAGEB6Q8N7X4 407 aa20.33■□□□□ 0.85
SDCBP-201ENST00000260130 TMEM39BQ9GZU3 492 aa20.33■□□□□ 0.85
SDCBP-201ENST00000260130 MKRN1Q9UHC7 482 aaKnown RBP20.33■□□□□ 0.85
SDCBP-201ENST00000260130 MYH2Q9UKX2 1941 aa20.33■□□□□ 0.84
SDCBP-201ENST00000260130 MX1P20591 662 aa20.32■□□□□ 0.84
SDCBP-201ENST00000260130 CYP7A1P22680 504 aa20.32■□□□□ 0.84
SDCBP-201ENST00000260130 NUCB1Q02818 461 aa20.32■□□□□ 0.84
SDCBP-201ENST00000260130 NBPF12Q5TAG4 269 aaPredicted RBP20.32■□□□□ 0.84
SDCBP-201ENST00000260130 NOL10Q9BSC4 688 aaKnown RBP20.32■□□□□ 0.84
SDCBP-201ENST00000260130 LNPKQ9C0E8 428 aa20.32■□□□□ 0.84
SDCBP-201ENST00000260130 SALL3Q9BXA9 1300 aa20.32■□□□□ 0.84
SDCBP-201ENST00000260130 ERC2O15083 957 aa20.32■□□□□ 0.84
SDCBP-201ENST00000260130 BAG3O95817 575 aa20.32■□□□□ 0.84
SDCBP-201ENST00000260130 MAP4K4O95819 1239 aaPredicted RBP20.32■□□□□ 0.84
SDCBP-201ENST00000260130 RHBDL3P58872 404 aa20.32■□□□□ 0.84
SDCBP-201ENST00000260130 NFIAQ12857 509 aa20.32■□□□□ 0.84
SDCBP-201ENST00000260130 ADGRA1Q86SQ6 560 aa20.32■□□□□ 0.84
SDCBP-201ENST00000260130 CHD1LQ86WJ1 897 aa20.32■□□□□ 0.84
SDCBP-201ENST00000260130 TEPSINQ96N21 525 aa20.32■□□□□ 0.84
SDCBP-201ENST00000260130 IDI2Q9BXS1 227 aa20.32■□□□□ 0.84
SDCBP-201ENST00000260130 HUNKP57058 714 aa20.31■□□□□ 0.84
SDCBP-201ENST00000260130 FAM151AQ8WW52 585 aa20.31■□□□□ 0.84
SDCBP-201ENST00000260130 KLRG1Q96E93 195 aa20.31■□□□□ 0.84
SDCBP-201ENST00000260130 PPP4CP60510 307 aa20.31■□□□□ 0.84
SDCBP-201ENST00000260130 TTLL12Q14166 644 aaPredicted RBP20.31■□□□□ 0.84
SDCBP-201ENST00000260130 SLC9C2Q5TAH2 1124 aa20.31■□□□□ 0.84
SDCBP-201ENST00000260130 AATFQ9NY61 560 aaKnown RBP eCLIP20.31■□□□□ 0.84
SDCBP-201ENST00000260130 FAM198AQ9UFP1 575 aa20.31■□□□□ 0.84
SDCBP-201ENST00000260130 GLRX3O76003 335 aaKnown RBP20.3■□□□□ 0.84
SDCBP-201ENST00000260130 TCP10Q12799 353 aa20.3■□□□□ 0.84
SDCBP-201ENST00000260130 PI4K2BQ8TCG2 481 aa20.3■□□□□ 0.84
SDCBP-201ENST00000260130 HHIPL1Q96JK4 782 aa20.3■□□□□ 0.84
SDCBP-201ENST00000260130 WDHD1O75717 1129 aaPredicted RBP20.29■□□□□ 0.84
SDCBP-201ENST00000260130 PRKG1Q13976 671 aa20.29■□□□□ 0.84
SDCBP-201ENST00000260130 CDAN1Q8IWY9 1227 aa20.29■□□□□ 0.84
SDCBP-201ENST00000260130 STAP2Q9UGK3 403 aa20.29■□□□□ 0.84
SDCBP-201ENST00000260130 PPP1R12BO60237 982 aaPredicted RBP20.29■□□□□ 0.84
SDCBP-201ENST00000260130 ENTPD3O75355 529 aa20.29■□□□□ 0.84
SDCBP-201ENST00000260130 PDE6AP16499 860 aa20.29■□□□□ 0.84
SDCBP-201ENST00000260130 RGS3P49796 1198 aa20.29■□□□□ 0.84
SDCBP-201ENST00000260130 MOB2Q70IA6 237 aa20.29■□□□□ 0.84
SDCBP-201ENST00000260130 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.29■□□□□ 0.84
SDCBP-201ENST00000260130 PLCG2P16885 1265 aa20.28■□□□□ 0.84
SDCBP-201ENST00000260130 ARMC9Q7Z3E5 817 aa20.28■□□□□ 0.84
SDCBP-201ENST00000260130 MAST2Q6P0Q8 1798 aa20.28■□□□□ 0.84
SDCBP-201ENST00000260130 MYO5AQ9Y4I1 1855 aaKnown RBP20.28■□□□□ 0.84
SDCBP-201ENST00000260130 UBE2Q2LH0YL09 131 aa20.28■□□□□ 0.84
SDCBP-201ENST00000260130 PDE1AP54750 535 aa20.28■□□□□ 0.84
SDCBP-201ENST00000260130 SH3RF3Q8TEJ3 882 aaPredicted RBP20.28■□□□□ 0.84
SDCBP-201ENST00000260130 SSC5DA1L4H1 1573 aa20.27■□□□□ 0.84
SDCBP-201ENST00000260130 PICALMQ13492 652 aa20.27■□□□□ 0.84
SDCBP-201ENST00000260130 PAXIP1Q6ZW49 1069 aaPredicted RBP20.27■□□□□ 0.84
SDCBP-201ENST00000260130 ZFPM1Q8IX07 1006 aa20.27■□□□□ 0.84
SDCBP-201ENST00000260130 TEX11Q8IYF3 940 aa20.27■□□□□ 0.84
SDCBP-201ENST00000260130 MIGA1Q8NAN2 632 aa20.27■□□□□ 0.84
SDCBP-201ENST00000260130 DDX4Q9NQI0 724 aaKnown RBP20.27■□□□□ 0.84
SDCBP-201ENST00000260130 ANGEL1Q9UNK9 670 aaKnown RBP20.27■□□□□ 0.84
SDCBP-201ENST00000260130 FZD1Q9UP38 647 aa20.27■□□□□ 0.84
SDCBP-201ENST00000260130 RFX7Q2KHR2 1363 aa20.27■□□□□ 0.84
SDCBP-201ENST00000260130 ZNF532Q9HCE3 1301 aa20.27■□□□□ 0.84
SDCBP-201ENST00000260130 NPM3O75607 178 aaKnown RBP20.27■□□□□ 0.83
SDCBP-201ENST00000260130 VEGFBP49765 207 aa20.27■□□□□ 0.83
SDCBP-201ENST00000260130 DYNLL1P63167 89 aaKnown RBP20.27■□□□□ 0.83
SDCBP-201ENST00000260130 CERS3Q8IU89 383 aa20.27■□□□□ 0.83
SDCBP-201ENST00000260130 RPAP1Q9BWH6 1393 aaPredicted RBP20.26■□□□□ 0.83
SDCBP-201ENST00000260130 DOCK2Q92608 1830 aa20.26■□□□□ 0.83
SDCBP-201ENST00000260130 TCRBV5S4A2TA0A5A2 114 aa20.26■□□□□ 0.83
SDCBP-201ENST00000260130 MAP3K11Q16584 847 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms