RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 FANCLQ9NW38 375 aa5.25□□□□□ -1.57
VPS13C-201ENST00000249837 PLBD2Q8NHP8 589 aa5.25□□□□□ -1.57
VPS13C-201ENST00000249837 AIFM3Q96NN9 605 aa5.25□□□□□ -1.57
VPS13C-201ENST00000249837 RSPH14Q9UHP6 348 aa5.25□□□□□ -1.57
VPS13C-201ENST00000249837 MLH3Q9UHC1 1453 aa5.25□□□□□ -1.57
VPS13C-201ENST00000249837 CTAGE15A4D2H0 777 aa5.25□□□□□ -1.57
VPS13C-201ENST00000249837 VWA3AA6NCI4 1184 aa5.25□□□□□ -1.57
VPS13C-201ENST00000249837 POTEB2H3BUK9 544 aa5.25□□□□□ -1.57
VPS13C-201ENST00000249837 COBLO75128 1261 aa5.25□□□□□ -1.57
VPS13C-201ENST00000249837 CTAGE8P0CG41 777 aa5.25□□□□□ -1.57
VPS13C-201ENST00000249837 CTAGE6Q86UF2 777 aa5.25□□□□□ -1.57
VPS13C-201ENST00000249837 CTAGE4Q8IX94 777 aa5.25□□□□□ -1.57
VPS13C-201ENST00000249837 ALKQ9UM73 1620 aa5.25□□□□□ -1.57
VPS13C-201ENST00000249837 ADKP55263 362 aaKnown RBP5.25□□□□□ -1.57
VPS13C-201ENST00000249837 SPTY2D1Q68D10 685 aaPredicted RBP5.25□□□□□ -1.57
VPS13C-201ENST00000249837 DZIP1Q86YF9 867 aaKnown RBP5.25□□□□□ -1.57
VPS13C-201ENST00000249837 UBA5Q9GZZ9 404 aa5.25□□□□□ -1.57
VPS13C-201ENST00000249837 CAVIN4Q5BKX8 364 aa5.25□□□□□ -1.57
VPS13C-201ENST00000249837 TMEM87AQ8NBN3 555 aa5.25□□□□□ -1.57
VPS13C-201ENST00000249837 KAT14Q9H8E8 782 aa5.25□□□□□ -1.57
VPS13C-201ENST00000249837 IGSF1Q8N6C5 1336 aa5.24□□□□□ -1.57
VPS13C-201ENST00000249837 NCBP1Q09161 790 aaKnown RBP5.24□□□□□ -1.57
VPS13C-201ENST00000249837 MAP9Q49MG5 647 aa5.24□□□□□ -1.57
VPS13C-201ENST00000249837 TAX1BP1Q86VP1 789 aa5.24□□□□□ -1.57
VPS13C-201ENST00000249837 PGBD1Q96JS3 809 aa5.24□□□□□ -1.57
VPS13C-201ENST00000249837 SLC52A2Q9HAB3 445 aa5.24□□□□□ -1.57
VPS13C-201ENST00000249837 TSPY2A6NKD2 308 aa5.24□□□□□ -1.57
VPS13C-201ENST00000249837 MPHOSPH10O00566 681 aaKnown RBP5.24□□□□□ -1.57
VPS13C-201ENST00000249837 KIF20AO95235 890 aa5.24□□□□□ -1.57
VPS13C-201ENST00000249837 KRT2P35908 639 aa5.24□□□□□ -1.57
VPS13C-201ENST00000249837 DPCR1Q3MIW9 517 aa5.24□□□□□ -1.57
VPS13C-201ENST00000249837 SLF1Q9BQI6 1058 aa5.24□□□□□ -1.57
VPS13C-201ENST00000249837 IL25Q9H293 177 aa5.24□□□□□ -1.57
VPS13C-201ENST00000249837 PNPLA6Q8IY17 1366 aa5.24□□□□□ -1.57
VPS13C-201ENST00000249837 GOLGA6L10A6NI86 522 aa5.24□□□□□ -1.57
VPS13C-201ENST00000249837 RABEP2Q9H5N1 569 aa5.24□□□□□ -1.57
VPS13C-201ENST00000249837 ZNF652Q9Y2D9 606 aa5.24□□□□□ -1.57
VPS13C-201ENST00000249837 ADGRB3O60242 1522 aa5.24□□□□□ -1.57
VPS13C-201ENST00000249837 ERLIN2O94905 339 aa5.24□□□□□ -1.57
VPS13C-201ENST00000249837 ASIC1P78348 528 aa5.24□□□□□ -1.57
VPS13C-201ENST00000249837 TOB2Q14106 344 aaPredicted RBP5.24□□□□□ -1.57
VPS13C-201ENST00000249837 BBXQ8WY36 941 aaPredicted RBP5.24□□□□□ -1.57
VPS13C-201ENST00000249837 ZNF274Q96GC6 653 aaPredicted RBP5.24□□□□□ -1.57
VPS13C-201ENST00000249837 PDIA3P30101 505 aaKnown RBP5.24□□□□□ -1.57
VPS13C-201ENST00000249837 CDR1P51861 262 aa5.24□□□□□ -1.57
VPS13C-201ENST00000249837 MYSM1Q5VVJ2 828 aa5.24□□□□□ -1.57
VPS13C-201ENST00000249837 RTEL1Q9NZ71 1219 aa5.24□□□□□ -1.57
VPS13C-201ENST00000249837 M0R2C6 588 aa5.24□□□□□ -1.57
VPS13C-201ENST00000249837 PDE6AP16499 860 aa5.24□□□□□ -1.57
VPS13C-201ENST00000249837 C10orf67Q8IYJ2 551 aa5.24□□□□□ -1.57
VPS13C-201ENST00000249837 USP6P35125 1406 aa5.24□□□□□ -1.57
VPS13C-201ENST00000249837 FGAP02671 866 aa5.24□□□□□ -1.57
VPS13C-201ENST00000249837 OAS2P29728 719 aaKnown RBP5.24□□□□□ -1.57
VPS13C-201ENST00000249837 MCM7P33993 719 aa5.24□□□□□ -1.57
VPS13C-201ENST00000249837 SPAG1Q07617 926 aa5.24□□□□□ -1.57
VPS13C-201ENST00000249837 ZNF444Q8N0Y2 327 aaPredicted RBP5.24□□□□□ -1.57
VPS13C-201ENST00000249837 TCP11L1Q9NUJ3 509 aa5.24□□□□□ -1.57
VPS13C-201ENST00000249837 MROH2AA6NES4 1674 aa5.24□□□□□ -1.57
VPS13C-201ENST00000249837 IFIT1BQ5T764 474 aaKnown RBP5.24□□□□□ -1.57
VPS13C-201ENST00000249837 VPS54Q9P1Q0 977 aa5.24□□□□□ -1.57
VPS13C-201ENST00000249837 CPS1P31327 1500 aa5.24□□□□□ -1.57
VPS13C-201ENST00000249837 HLTFQ14527 1009 aaKnown RBP eCLIP5.24□□□□□ -1.571e-6■□□□□ 11.3
VPS13C-201ENST00000249837 CCDC144BQ3MJ40 725 aa5.24□□□□□ -1.57
VPS13C-201ENST00000249837 CCDC40Q4G0X9 1142 aa5.24□□□□□ -1.57
VPS13C-201ENST00000249837 TSG101Q99816 390 aa5.24□□□□□ -1.57
VPS13C-201ENST00000249837 KCNF1Q9H3M0 494 aa5.24□□□□□ -1.57
VPS13C-201ENST00000249837 CNNM2Q9H8M5 875 aa5.24□□□□□ -1.57
VPS13C-201ENST00000249837 SPTLC3Q9NUV7 552 aa5.24□□□□□ -1.57
VPS13C-201ENST00000249837 ZC3H13Q5T200 1668 aaKnown RBP5.24□□□□□ -1.57
VPS13C-201ENST00000249837 KIF20BQ96Q89 1820 aa5.24□□□□□ -1.57
VPS13C-201ENST00000249837 EXOC5O00471 708 aa5.24□□□□□ -1.57
VPS13C-201ENST00000249837 IRS4O14654 1257 aaPredicted RBP5.24□□□□□ -1.57
VPS13C-201ENST00000249837 CYP21A2P08686 494 aa5.24□□□□□ -1.57
VPS13C-201ENST00000249837 CMA1P23946 247 aa5.24□□□□□ -1.57
VPS13C-201ENST00000249837 GRAMD1CQ8IYS0 662 aa5.24□□□□□ -1.57
VPS13C-201ENST00000249837 IMPACTQ9P2X3 320 aa5.24□□□□□ -1.57
VPS13C-201ENST00000249837 NCOA3Q9Y6Q9 1424 aa5.24□□□□□ -1.57
VPS13C-201ENST00000249837 RDXP35241 583 aaKnown RBP5.23□□□□□ -1.57
VPS13C-201ENST00000249837 ETF1P62495 437 aaKnown RBP5.23□□□□□ -1.57
VPS13C-201ENST00000249837 TEX13AQ9BXU3 409 aaPredicted RBP5.23□□□□□ -1.57
VPS13C-201ENST00000249837 MMRN2Q9H8L6 949 aa5.23□□□□□ -1.57
VPS13C-201ENST00000249837 EXOC1Q9NV70 894 aa5.23□□□□□ -1.57
VPS13C-201ENST00000249837 TAF6LQ9Y6J9 622 aa5.23□□□□□ -1.57
VPS13C-201ENST00000249837 MYO5BQ9ULV0 1848 aa5.23□□□□□ -1.57
VPS13C-201ENST00000249837 VGLL3A8MV65 326 aa5.23□□□□□ -1.57
VPS13C-201ENST00000249837 DMTNQ08495 405 aa5.23□□□□□ -1.57
VPS13C-201ENST00000249837 TCERG1LQ5VWI1 586 aa5.23□□□□□ -1.57
VPS13C-201ENST00000249837 HDXQ7Z353 690 aa5.23□□□□□ -1.57
VPS13C-201ENST00000249837 SRRTQ9BXP5 876 aaKnown RBP5.23□□□□□ -1.57
VPS13C-201ENST00000249837 SEC63Q9UGP8 760 aaKnown RBP5.23□□□□□ -1.57
VPS13C-201ENST00000249837 USO1O60763 962 aaKnown RBP5.23□□□□□ -1.57
VPS13C-201ENST00000249837 CHGBP05060 677 aa5.23□□□□□ -1.57
VPS13C-201ENST00000249837 CCDC152Q4G0S7 254 aa5.23□□□□□ -1.57
VPS13C-201ENST00000249837 ADALQ6DHV7 355 aa5.23□□□□□ -1.57
VPS13C-201ENST00000249837 NIP7Q9Y221 180 aaKnown RBP eCLIP5.23□□□□□ -1.57
VPS13C-201ENST00000249837 CTDP1Q9Y5B0 961 aaPredicted RBP5.23□□□□□ -1.57
VPS13C-201ENST00000249837 ATP10DQ9P241 1426 aa5.23□□□□□ -1.57
VPS13C-201ENST00000249837 ZNF76P36508 570 aa5.23□□□□□ -1.57
VPS13C-201ENST00000249837 CEP112Q8N8E3 955 aa5.23□□□□□ -1.57
VPS13C-201ENST00000249837 UIMC1Q96RL1 719 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms