RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 TERF2Q15554 542 aa13.87□□□□□ -0.19
SEC61A1-201ENST00000243253 DPF2Q92785 391 aa13.87□□□□□ -0.19
SEC61A1-201ENST00000243253 FAM217BQ9NTX9 383 aaPredicted RBP13.87□□□□□ -0.19
SEC61A1-201ENST00000243253 DLEC1Q9Y238 1755 aa13.87□□□□□ -0.19
SEC61A1-201ENST00000243253 TNS3Q68CZ2 1445 aa13.87□□□□□ -0.19
SEC61A1-201ENST00000243253 CSF1RP07333 972 aa13.87□□□□□ -0.19
SEC61A1-201ENST00000243253 UBXN6Q9BZV1 441 aa13.87□□□□□ -0.19
SEC61A1-201ENST00000243253 IFNKQ9P0W0 207 aa13.87□□□□□ -0.19
SEC61A1-201ENST00000243253 TACC3Q9Y6A5 838 aa13.87□□□□□ -0.19
SEC61A1-201ENST00000243253 A0A1B0GUL6 1792 aa13.87□□□□□ -0.19
SEC61A1-201ENST00000243253 IDH1O75874 414 aaKnown RBP13.87□□□□□ -0.19
SEC61A1-201ENST00000243253 ZRANB2O95218 330 aaKnown RBP eCLIP13.87□□□□□ -0.19
SEC61A1-201ENST00000243253 ATP1A3P13637 1013 aa13.87□□□□□ -0.19
SEC61A1-201ENST00000243253 GNL2Q13823 731 aaKnown RBP13.87□□□□□ -0.19
SEC61A1-201ENST00000243253 NKX1-1Q15270 411 aaPredicted RBP13.87□□□□□ -0.19
SEC61A1-201ENST00000243253 REXO1L1PQ8IX06 675 aa13.87□□□□□ -0.19
SEC61A1-201ENST00000243253 PLA2G12BQ9BX93 195 aa13.87□□□□□ -0.19
SEC61A1-201ENST00000243253 IGSF3O75054 1194 aa13.86□□□□□ -0.19
SEC61A1-201ENST00000243253 ANO1Q5XXA6 986 aa13.86□□□□□ -0.19
SEC61A1-201ENST00000243253 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.86□□□□□ -0.19
SEC61A1-201ENST00000243253 V9GYY5 206 aaPredicted RBP13.86□□□□□ -0.19
SEC61A1-201ENST00000243253 SLU7O95391 586 aaKnown RBP13.86□□□□□ -0.19
SEC61A1-201ENST00000243253 TBX2Q13207 712 aaPredicted RBP13.86□□□□□ -0.19
SEC61A1-201ENST00000243253 ZRSR1Q15695 479 aaKnown RBP13.86□□□□□ -0.19
SEC61A1-201ENST00000243253 VGLL2Q8N8G2 317 aa13.86□□□□□ -0.19
SEC61A1-201ENST00000243253 NAT10Q9H0A0 1025 aaKnown RBP13.86□□□□□ -0.19
SEC61A1-201ENST00000243253 PRC1O43663 620 aa13.85□□□□□ -0.19
SEC61A1-201ENST00000243253 CREBRFQ8IUR6 639 aa13.85□□□□□ -0.19
SEC61A1-201ENST00000243253 SENP2Q9HC62 589 aa13.85□□□□□ -0.19
SEC61A1-201ENST00000243253 FBXO3Q9UK99 471 aa13.85□□□□□ -0.19
SEC61A1-201ENST00000243253 CASZ1Q86V15 1759 aa13.85□□□□□ -0.19
SEC61A1-201ENST00000243253 BECN2A8MW95 431 aa13.85□□□□□ -0.19
SEC61A1-201ENST00000243253 CDC27P30260 824 aa13.85□□□□□ -0.19
SEC61A1-201ENST00000243253 CYB5R4Q7L1T6 521 aa13.85□□□□□ -0.19
SEC61A1-201ENST00000243253 CCDC150Q8NCX0 1101 aa13.85□□□□□ -0.19
SEC61A1-201ENST00000243253 XAGE2Q96GT9 111 aa13.85□□□□□ -0.19
SEC61A1-201ENST00000243253 AIFM3Q96NN9 605 aa13.85□□□□□ -0.19
SEC61A1-201ENST00000243253 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.85□□□□□ -0.19
SEC61A1-201ENST00000243253 PPP6R2O75170 966 aa13.85□□□□□ -0.19
SEC61A1-201ENST00000243253 METTL16Q86W50 562 aaKnown RBP13.85□□□□□ -0.19
SEC61A1-201ENST00000243253 MED15Q96RN5 788 aa13.85□□□□□ -0.19
SEC61A1-201ENST00000243253 BCL9LQ86UU0 1499 aa13.85□□□□□ -0.19
SEC61A1-201ENST00000243253 RESP18Q5W5W9 173 aa13.84□□□□□ -0.19
SEC61A1-201ENST00000243253 TBC1D10CQ8IV04 446 aa13.84□□□□□ -0.19
SEC61A1-201ENST00000243253 ELOA2Q8IYF1 753 aaPredicted RBP13.84□□□□□ -0.19
SEC61A1-201ENST00000243253 C8orf76Q96K31 380 aa13.84□□□□□ -0.19
SEC61A1-201ENST00000243253 ZNF512BQ96KM6 892 aaPredicted RBP13.84□□□□□ -0.19
SEC61A1-201ENST00000243253 TBC1D2BQ9UPU7 963 aa13.84□□□□□ -0.19
SEC61A1-201ENST00000243253 TCRBV5S4A2TA0A5A2 114 aa13.84□□□□□ -0.19
SEC61A1-201ENST00000243253 KCNQ4P56696 695 aa13.84□□□□□ -0.19
SEC61A1-201ENST00000243253 MYH6P13533 1939 aa13.84□□□□□ -0.19
SEC61A1-201ENST00000243253 MAP3K15Q6ZN16 1313 aa13.84□□□□□ -0.19
SEC61A1-201ENST00000243253 PHLPP2Q6ZVD8 1323 aa13.84□□□□□ -0.19
SEC61A1-201ENST00000243253 KLF18A0A0U1RQI7 1052 aa13.84□□□□□ -0.19
SEC61A1-201ENST00000243253 KIF2AO00139 706 aaPredicted RBP13.84□□□□□ -0.19
SEC61A1-201ENST00000243253 RANBP6O60518 1105 aaKnown RBP13.84□□□□□ -0.19
SEC61A1-201ENST00000243253 APPBP2Q92624 585 aa13.84□□□□□ -0.19
SEC61A1-201ENST00000243253 ST7Q9NRC1 585 aa13.84□□□□□ -0.19
SEC61A1-201ENST00000243253 ZMYM6O95789 1325 aa13.84□□□□□ -0.19
SEC61A1-201ENST00000243253 MYH2Q9UKX2 1941 aa13.84□□□□□ -0.19
SEC61A1-201ENST00000243253 FANCCQ00597 558 aa13.83□□□□□ -0.19
SEC61A1-201ENST00000243253 TRIM28Q13263 835 aaKnown RBP13.83□□□□□ -0.19
SEC61A1-201ENST00000243253 NT5DC1Q5TFE4 455 aa13.83□□□□□ -0.19
SEC61A1-201ENST00000243253 IGDCC4Q8TDY8 1250 aa13.83□□□□□ -0.19
SEC61A1-201ENST00000243253 CPLX1O14810 134 aa13.83□□□□□ -0.2
SEC61A1-201ENST00000243253 MCAMP43121 646 aa13.83□□□□□ -0.2
SEC61A1-201ENST00000243253 ZAP70P43403 619 aa13.83□□□□□ -0.2
SEC61A1-201ENST00000243253 SMIM5Q71RC9 77 aa13.83□□□□□ -0.2
SEC61A1-201ENST00000243253 TMC6Q7Z403 805 aa13.83□□□□□ -0.2
SEC61A1-201ENST00000243253 CCDC24Q8N4L8 307 aa13.83□□□□□ -0.2
SEC61A1-201ENST00000243253 RIPOR2Q9Y4F9 1068 aa13.83□□□□□ -0.2
SEC61A1-201ENST00000243253 COL5A2P05997 1499 aaPredicted RBP13.83□□□□□ -0.2
SEC61A1-201ENST00000243253 UBE2Q2LH0YL09 131 aa13.83□□□□□ -0.2
SEC61A1-201ENST00000243253 SH2B2O14492 632 aaPredicted RBP13.83□□□□□ -0.2
SEC61A1-201ENST00000243253 ZFYP08048 801 aaPredicted RBP13.83□□□□□ -0.2
SEC61A1-201ENST00000243253 SLC3A2P08195 630 aaKnown RBP13.83□□□□□ -0.2
SEC61A1-201ENST00000243253 ERCC6LQ2NKX8 1250 aa13.83□□□□□ -0.2
SEC61A1-201ENST00000243253 C19orf44Q9H6X5 657 aa13.83□□□□□ -0.2
SEC61A1-201ENST00000243253 ORC3Q9UBD5 711 aaPredicted RBP13.83□□□□□ -0.2
SEC61A1-201ENST00000243253 PARP3Q9Y6F1 533 aa13.83□□□□□ -0.2
SEC61A1-201ENST00000243253 PDE4BQ07343 736 aa13.82□□□□□ -0.2
SEC61A1-201ENST00000243253 CCDC57Q2TAC2 916 aa13.82□□□□□ -0.2
SEC61A1-201ENST00000243253 TTC39AQ5SRH9 613 aa13.82□□□□□ -0.2
SEC61A1-201ENST00000243253 VSTM4Q8IW00 320 aa13.82□□□□□ -0.2
SEC61A1-201ENST00000243253 SDF4Q9BRK5 362 aa13.82□□□□□ -0.2
SEC61A1-201ENST00000243253 MYL10Q9BUA6 226 aa13.82□□□□□ -0.2
SEC61A1-201ENST00000243253 PHLPP1O60346 1717 aa13.82□□□□□ -0.2
SEC61A1-201ENST00000243253 VWA3AA6NCI4 1184 aa13.82□□□□□ -0.2
SEC61A1-201ENST00000243253 SYT10Q6XYQ8 523 aa13.82□□□□□ -0.2
SEC61A1-201ENST00000243253 BICDL1Q6ZP65 573 aa13.82□□□□□ -0.2
SEC61A1-201ENST00000243253 INCENPQ9NQS7 918 aa13.82□□□□□ -0.2
SEC61A1-201ENST00000243253 JAG2Q9Y219 1238 aa13.82□□□□□ -0.2
SEC61A1-201ENST00000243253 GOLGA8BA8MQT2 603 aa13.82□□□□□ -0.2
SEC61A1-201ENST00000243253 ZNF18P17022 549 aa13.82□□□□□ -0.2
SEC61A1-201ENST00000243253 SARSP49591 514 aaKnown RBP13.82□□□□□ -0.2
SEC61A1-201ENST00000243253 IMMTQ16891 758 aaKnown RBP13.82□□□□□ -0.2
SEC61A1-201ENST00000243253 KRT222Q8N1A0 295 aa13.82□□□□□ -0.2
SEC61A1-201ENST00000243253 NCOA7Q8NI08 942 aa13.82□□□□□ -0.2
SEC61A1-201ENST00000243253 ACSBG1Q96GR2 724 aa13.82□□□□□ -0.2
SEC61A1-201ENST00000243253 CNNM1Q9NRU3 951 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms